BLASTX nr result

ID: Cnidium21_contig00011921 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00011921
         (297 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263612.1| PREDICTED: uncharacterized protein LOC100256...    79   4e-13
ref|XP_002530111.1| DNA-3-methyladenine glycosylase, putative [R...    79   5e-13
emb|CAN68394.1| hypothetical protein VITISV_042519 [Vitis vinifera]    79   5e-13
ref|XP_002299382.1| predicted protein [Populus trichocarpa] gi|2...    69   3e-10
ref|XP_003531474.1| PREDICTED: probable GMP synthase [glutamine-...    66   3e-09

>ref|XP_002263612.1| PREDICTED: uncharacterized protein LOC100256507 [Vitis vinifera]
           gi|297738175|emb|CBI27376.3| unnamed protein product
           [Vitis vinifera]
          Length = 398

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 46/79 (58%), Positives = 53/79 (67%)
 Frame = -1

Query: 297 NSLKKNSAKSVTTPPKIQPLPSKISTNTTFTNVSPKVRPSVITPPISPKLKSPRQPAIKR 118
           +S KK S KS T+P    P P     NTT      K +PS +TPP SP LKSPRQPA+KR
Sbjct: 41  HSFKKISPKSPTSPLPASPPPPTTIINTT------KTKPS-LTPPASPNLKSPRQPALKR 93

Query: 117 GNDPNGLSSSTEKVVSTPR 61
           GNDPNGL+SS EKV+ TPR
Sbjct: 94  GNDPNGLNSSLEKVL-TPR 111


>ref|XP_002530111.1| DNA-3-methyladenine glycosylase, putative [Ricinus communis]
           gi|223530365|gb|EEF32255.1| DNA-3-methyladenine
           glycosylase, putative [Ricinus communis]
          Length = 403

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 46/79 (58%), Positives = 54/79 (68%)
 Frame = -1

Query: 297 NSLKKNSAKSVTTPPKIQPLPSKISTNTTFTNVSPKVRPSVITPPISPKLKSPRQPAIKR 118
           NSLKKNS KS    P   PLP   +T T    + PK +PS ++PPISPKLKSPR PA+KR
Sbjct: 49  NSLKKNSPKSPIIQPPAAPLPLLPTTTT----IKPK-QPSSLSPPISPKLKSPRPPALKR 103

Query: 117 GNDPNGLSSSTEKVVSTPR 61
           GND N L+SS EK + TPR
Sbjct: 104 GNDLNTLNSSAEKFL-TPR 121


>emb|CAN68394.1| hypothetical protein VITISV_042519 [Vitis vinifera]
          Length = 398

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 46/79 (58%), Positives = 56/79 (70%)
 Frame = -1

Query: 297 NSLKKNSAKSVTTPPKIQPLPSKISTNTTFTNVSPKVRPSVITPPISPKLKSPRQPAIKR 118
           +S KK S KS T+P     LP+ +   TT  N + K +PS +TPP SP LKSPRQPA+KR
Sbjct: 41  HSFKKISPKSPTSP-----LPASLPPPTTIINTT-KTKPS-LTPPASPNLKSPRQPALKR 93

Query: 117 GNDPNGLSSSTEKVVSTPR 61
           GNDPNGL+SS EKV+ TPR
Sbjct: 94  GNDPNGLNSSLEKVL-TPR 111


>ref|XP_002299382.1| predicted protein [Populus trichocarpa] gi|222846640|gb|EEE84187.1|
           predicted protein [Populus trichocarpa]
          Length = 373

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 42/77 (54%), Positives = 53/77 (68%), Gaps = 3/77 (3%)
 Frame = -1

Query: 297 NSLKKNS-AKSVTTPPK-IQPLP-SKISTNTTFTNVSPKVRPSVITPPISPKLKSPRQPA 127
           NSLKKNS AKS T  P  + P+P  + + N   T      +PS ++PPISPKLKSP  PA
Sbjct: 42  NSLKKNSPAKSPTQEPAAVPPIPLMQPAGNAAGTKTK---QPSGLSPPISPKLKSPVPPA 98

Query: 126 IKRGNDPNGLSSSTEKV 76
           +KRGNDP+GL++S EKV
Sbjct: 99  VKRGNDPDGLNTSAEKV 115


>ref|XP_003531474.1| PREDICTED: probable GMP synthase [glutamine-hydrolyzing]-like
           [Glycine max]
          Length = 400

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 38/75 (50%), Positives = 45/75 (60%)
 Frame = -1

Query: 297 NSLKKNSAKSVTTPPKIQPLPSKISTNTTFTNVSPKVRPSVITPPISPKLKSPRQPAIKR 118
           NS+KK +     +PP   PLPSK S                +TPP+SPKLKSPR PA KR
Sbjct: 46  NSIKKVAPPKSLSPPS-PPLPSKTS----------------LTPPVSPKLKSPRLPATKR 88

Query: 117 GNDPNGLSSSTEKVV 73
           GND NGL+SS EK+V
Sbjct: 89  GNDNNGLNSSYEKIV 103


Top