BLASTX nr result

ID: Cnidium21_contig00011878 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00011878
         (480 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004173540.1| PREDICTED: uncharacterized protein LOC101227...    80   1e-13
ref|XP_004149706.1| PREDICTED: uncharacterized protein LOC101213...    80   1e-13
ref|NP_001190940.1| splicing factor, arginine/serine-rich 16 [Ar...    80   1e-13
ref|NP_001190939.1| splicing factor, arginine/serine-rich 16 [Ar...    80   1e-13
ref|XP_002869003.1| hypothetical protein ARALYDRAFT_490906 [Arab...    80   1e-13

>ref|XP_004173540.1| PREDICTED: uncharacterized protein LOC101227176, partial [Cucumis
           sativus]
          Length = 285

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 36/37 (97%), Positives = 37/37 (100%)
 Frame = +1

Query: 1   RDDGLYQATQDQQGLIPWNGKQDVMIDRFDGRALLDF 111
           RDDGLYQAT+DQQGLIPWNGKQDVMIDRFDGRALLDF
Sbjct: 52  RDDGLYQATEDQQGLIPWNGKQDVMIDRFDGRALLDF 88



 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 36/52 (69%), Positives = 42/52 (80%), Gaps = 1/52 (1%)
 Frame = +3

Query: 327 DEDGLQHVHLEMEAKNVALFELDRSQPAQPP-ANKGAYSQVGFSYDGEGKQE 479
           DEDGLQHV+ EMEAK  A F  DRSQ  QPP A+KG+YSQVGFSY+ +GK+E
Sbjct: 131 DEDGLQHVNQEMEAKMSAPFVSDRSQQPQPPSASKGSYSQVGFSYEADGKEE 182


>ref|XP_004149706.1| PREDICTED: uncharacterized protein LOC101213620 [Cucumis sativus]
          Length = 557

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 36/37 (97%), Positives = 37/37 (100%)
 Frame = +1

Query: 1   RDDGLYQATQDQQGLIPWNGKQDVMIDRFDGRALLDF 111
           RDDGLYQAT+DQQGLIPWNGKQDVMIDRFDGRALLDF
Sbjct: 52  RDDGLYQATEDQQGLIPWNGKQDVMIDRFDGRALLDF 88



 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 36/52 (69%), Positives = 42/52 (80%), Gaps = 1/52 (1%)
 Frame = +3

Query: 327 DEDGLQHVHLEMEAKNVALFELDRSQPAQPP-ANKGAYSQVGFSYDGEGKQE 479
           DEDGLQHV+ EMEAK  A F  DRSQ  QPP A+KG+YSQVGFSY+ +GK+E
Sbjct: 131 DEDGLQHVNQEMEAKMSAPFVSDRSQQPQPPSASKGSYSQVGFSYEADGKEE 182


>ref|NP_001190940.1| splicing factor, arginine/serine-rich 16 [Arabidopsis thaliana]
           gi|332661330|gb|AEE86730.1| splicing factor,
           arginine/serine-rich 16 [Arabidopsis thaliana]
          Length = 554

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 36/37 (97%), Positives = 37/37 (100%)
 Frame = +1

Query: 1   RDDGLYQATQDQQGLIPWNGKQDVMIDRFDGRALLDF 111
           RDDGLYQAT+DQQGLIPWNGKQDVMIDRFDGRALLDF
Sbjct: 52  RDDGLYQATEDQQGLIPWNGKQDVMIDRFDGRALLDF 88



 Score = 75.1 bits (183), Expect = 5e-12
 Identities = 36/49 (73%), Positives = 39/49 (79%)
 Frame = +3

Query: 327 DEDGLQHVHLEMEAKNVALFELDRSQPAQPPANKGAYSQVGFSYDGEGK 473
           DE+GLQHVH E+EAK  A F   R+QPAQPPANKG YSQVGFSY G GK
Sbjct: 131 DEEGLQHVHQELEAKLAAPFLGTRTQPAQPPANKGTYSQVGFSYAGNGK 179


>ref|NP_001190939.1| splicing factor, arginine/serine-rich 16 [Arabidopsis thaliana]
           gi|332661329|gb|AEE86729.1| splicing factor,
           arginine/serine-rich 16 [Arabidopsis thaliana]
          Length = 556

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 36/37 (97%), Positives = 37/37 (100%)
 Frame = +1

Query: 1   RDDGLYQATQDQQGLIPWNGKQDVMIDRFDGRALLDF 111
           RDDGLYQAT+DQQGLIPWNGKQDVMIDRFDGRALLDF
Sbjct: 52  RDDGLYQATEDQQGLIPWNGKQDVMIDRFDGRALLDF 88



 Score = 75.1 bits (183), Expect = 5e-12
 Identities = 36/49 (73%), Positives = 39/49 (79%)
 Frame = +3

Query: 327 DEDGLQHVHLEMEAKNVALFELDRSQPAQPPANKGAYSQVGFSYDGEGK 473
           DE+GLQHVH E+EAK  A F   R+QPAQPPANKG YSQVGFSY G GK
Sbjct: 131 DEEGLQHVHQELEAKLAAPFLGTRTQPAQPPANKGTYSQVGFSYAGNGK 179


>ref|XP_002869003.1| hypothetical protein ARALYDRAFT_490906 [Arabidopsis lyrata subsp.
           lyrata] gi|297314839|gb|EFH45262.1| hypothetical protein
           ARALYDRAFT_490906 [Arabidopsis lyrata subsp. lyrata]
          Length = 505

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 36/37 (97%), Positives = 37/37 (100%)
 Frame = +1

Query: 1   RDDGLYQATQDQQGLIPWNGKQDVMIDRFDGRALLDF 111
           RDDGLYQAT+DQQGLIPWNGKQDVMIDRFDGRALLDF
Sbjct: 52  RDDGLYQATEDQQGLIPWNGKQDVMIDRFDGRALLDF 88



 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 35/49 (71%), Positives = 38/49 (77%)
 Frame = +3

Query: 327 DEDGLQHVHLEMEAKNVALFELDRSQPAQPPANKGAYSQVGFSYDGEGK 473
           DE+GL HVH E+EAK  A F   RSQPAQPPANKG YSQVG+SY G GK
Sbjct: 131 DEEGLLHVHQELEAKLSAPFPGARSQPAQPPANKGTYSQVGYSYAGNGK 179


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