BLASTX nr result

ID: Cnidium21_contig00011868 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00011868
         (1119 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269339.1| PREDICTED: uncharacterized protein LOC100252...    98   4e-18
gb|ADE76860.1| unknown [Picea sitchensis]                              83   1e-13
ref|NP_564007.1| uncharacterized protein [Arabidopsis thaliana] ...    77   6e-12
ref|XP_004146333.1| PREDICTED: uncharacterized protein LOC101223...    77   8e-12
ref|XP_002316436.1| predicted protein [Populus trichocarpa] gi|2...    75   3e-11

>ref|XP_002269339.1| PREDICTED: uncharacterized protein LOC100252029 [Vitis vinifera]
          Length = 197

 Score = 97.8 bits (242), Expect = 4e-18
 Identities = 66/173 (38%), Positives = 98/173 (56%), Gaps = 3/173 (1%)
 Frame = +1

Query: 148 MARLVYETLVRPSKSLSFMCMSPRILT--THRHGSNQSGKQPQLIEVDLDSSSSSDGEVL 321
           MAR++++TL     SLS  C  P +++  T RH SN+SGK  QLIE++L+S S  D EV+
Sbjct: 24  MARVLFQTLTLTRLSLSPSCKPPPLISVLTVRHRSNRSGKA-QLIEINLESESG-DVEVM 81

Query: 322 GIKKLEDVIHNIIVKRSAPDWLPFIXXXXXXXXXXXXXXXXXXXXXDILGKLTNHSPGLS 501
           GI++LED IH II +R APDWLPFI                     D+L  +   +  +S
Sbjct: 82  GIRRLEDAIHRIIAQRLAPDWLPFI-------PGSSYWVPPSRRQFDLLKCMGKLAREMS 134

Query: 502 HEESLSLSTIHGWPSSSFYFFQENSSTRPIPVEM-KVEVTIEKDSDKELQSED 657
            E++L+++ + GWPS S YF Q+++S      E  +VE   E  +  + Q+ D
Sbjct: 135 VEDALAVTAVRGWPSPS-YFIQDDASEHHSTAENDEVEAEAEIKAQNDSQNTD 186


>gb|ADE76860.1| unknown [Picea sitchensis]
          Length = 166

 Score = 83.2 bits (204), Expect = 1e-13
 Identities = 61/174 (35%), Positives = 92/174 (52%), Gaps = 9/174 (5%)
 Frame = +1

Query: 148 MARLVYETLVRPSKSLSFMCM-SPRILTTHRHGSNQSGKQP----QLIEVDLDSSSSSDG 312
           MA+ + +T ++ S   ++  + S R+L         S K      QLIEVDL  S++ +G
Sbjct: 3   MAQRLSQTALKMSNRGNYAQVPSSRLLNARFRSGGSSRKDSEGGSQLIEVDLGDSAAENG 62

Query: 313 E----VLGIKKLEDVIHNIIVKRSAPDWLPFIXXXXXXXXXXXXXXXXXXXXXDILGKLT 480
           E    V GI++LED IH I+V+R+APDWLPF+                     ++LG+L+
Sbjct: 63  ENSSEVFGIQRLEDAIHGILVRRAAPDWLPFL----PGASYWVPPRKNNGSLVELLGRLS 118

Query: 481 NHSPGLSHEESLSLSTIHGWPSSSFYFFQENSSTRPIPVEMKVEVTIEKDSDKE 642
           N+S  ++ EESLS +T  GWPSS+  +F E  S   + V   V V   K  ++E
Sbjct: 119 NNS--MTQEESLSFTTSRGWPSSA--YFIEGGSPHQVEV---VAVQNNKSEEEE 165


>ref|NP_564007.1| uncharacterized protein [Arabidopsis thaliana]
           gi|30685032|ref|NP_849677.1| uncharacterized protein
           [Arabidopsis thaliana] gi|42571511|ref|NP_973846.1|
           uncharacterized protein [Arabidopsis thaliana]
           gi|9802780|gb|AAF99849.1|AC051629_16 Unknown protein
           [Arabidopsis thaliana] gi|15450363|gb|AAK96475.1|
           At1g16840/F17F16.27 [Arabidopsis thaliana]
           gi|332191384|gb|AEE29505.1| uncharacterized protein
           [Arabidopsis thaliana] gi|332191386|gb|AEE29507.1|
           uncharacterized protein [Arabidopsis thaliana]
           gi|332191387|gb|AEE29508.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 161

 Score = 77.4 bits (189), Expect = 6e-12
 Identities = 50/140 (35%), Positives = 72/140 (51%)
 Frame = +1

Query: 244 SNQSGKQPQLIEVDLDSSSSSDGEVLGIKKLEDVIHNIIVKRSAPDWLPFIXXXXXXXXX 423
           S  S ++  L E+D  ++S S  + L I+KLED +H I V+R+ PDWLPF+         
Sbjct: 34  SQSSDRRGDLYEIDTSAASQSPSDPL-IQKLEDAVHRIFVRRAQPDWLPFV-PGASYWVP 91

Query: 424 XXXXXXXXXXXXDILGKLTNHSPGLSHEESLSLSTIHGWPSSSFYFFQENSSTRPIPVEM 603
                        ++ KL N    L+HEESLS ++ HGWPSS ++        +P  +E 
Sbjct: 92  PPGSGSQSHGIAQLVVKLAN---PLTHEESLSTNSSHGWPSSDYFL----KGVQPQLMET 144

Query: 604 KVEVTIEKDSDKELQSEDED 663
           K E T    S+ E  SEDE+
Sbjct: 145 KTETT----SNSESHSEDEE 160


>ref|XP_004146333.1| PREDICTED: uncharacterized protein LOC101223203 [Cucumis sativus]
           gi|449502966|ref|XP_004161792.1| PREDICTED:
           uncharacterized protein LOC101223493 [Cucumis sativus]
          Length = 174

 Score = 77.0 bits (188), Expect = 8e-12
 Identities = 51/137 (37%), Positives = 74/137 (54%), Gaps = 2/137 (1%)
 Frame = +1

Query: 232 HRHGSNQSGKQPQLIEVDLDSSS-SSDGEVLGIKKLEDVIHNIIVKRSAPDWLPFIXXXX 408
           HR+ S +SGK  + IEVDL+SSS  +D E+L I+KL+D +  IIV+RS PDWLPF+    
Sbjct: 30  HRNRSTRSGKV-KFIEVDLESSSYGADSEILAIRKLDDFVQRIIVERSTPDWLPFV---P 85

Query: 409 XXXXXXXXXXXXXXXXXDILGKLTNHSPGLSHEESLSLSTIHGWPSSSFYFFQENSS-TR 585
                            D+  KL      ++ E+S SL+   GWP   F+  +  S  TR
Sbjct: 86  GSSFWVPPRRNKPRRVVDLFDKLVE---PIAKEDSPSLANARGWPCLDFFAKESISGPTR 142

Query: 586 PIPVEMKVEVTIEKDSD 636
             PV+ ++E + E + D
Sbjct: 143 LAPVDTELETSNELEID 159


>ref|XP_002316436.1| predicted protein [Populus trichocarpa] gi|222865476|gb|EEF02607.1|
           predicted protein [Populus trichocarpa]
          Length = 167

 Score = 75.1 bits (183), Expect = 3e-11
 Identities = 57/152 (37%), Positives = 80/152 (52%), Gaps = 1/152 (0%)
 Frame = +1

Query: 211 SPRILTTHRHGSNQSGKQPQLIEVDLDSSSSSDGEVLGIKKLEDVIHNIIVKRSAPDWLP 390
           S R+LT  R  SN   +  Q    D  SSSS+D     ++KLED IH IIV+R+APDWLP
Sbjct: 25  SSRLLTL-RAQSNVPNRNNQSESDDSSSSSSTDPL---LRKLEDAIHGIIVRRAAPDWLP 80

Query: 391 FIXXXXXXXXXXXXXXXXXXXXXDILGKLTNHSPGLSHEESLSLSTIHGWPSSSFYFFQE 570
           F+                      ++ KL N    LS EESLS ST+ GWPSS   +F +
Sbjct: 81  FL-PGSSYWVPPPRSASGSLGIAHLVEKLAN---PLSDEESLSTSTVRGWPSSD--YFVK 134

Query: 571 NSSTRPIPVEM-KVEVTIEKDSDKELQSEDED 663
            +S++ + V++   +V  +  +    QSEDE+
Sbjct: 135 GASSQLVEVKLNSKKVEADTTTSNTSQSEDEE 166


Top