BLASTX nr result

ID: Cnidium21_contig00011845 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00011845
         (859 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003546887.1| PREDICTED: zinc finger CCCH domain-containin...   395   e-108
ref|XP_002279202.2| PREDICTED: zinc finger CCCH domain-containin...   394   e-107
gb|ADE74631.1| unknown [Vitis vinifera]                               394   e-107
ref|XP_003533897.1| PREDICTED: zinc finger CCCH domain-containin...   392   e-107
ref|XP_004136593.1| PREDICTED: zinc finger CCCH domain-containin...   392   e-107

>ref|XP_003546887.1| PREDICTED: zinc finger CCCH domain-containing protein 30-like
            [Glycine max]
          Length = 683

 Score =  395 bits (1015), Expect = e-108
 Identities = 194/286 (67%), Positives = 214/286 (74%), Gaps = 1/286 (0%)
 Frame = -3

Query: 857  ECPFVHPGENARRRDPRKFHYSCVPCPDFRKGACRRGDMCEYAHGVFECWLHPAQYRTRL 678
            ECPFVHPGENARRRDPRKFHYSCVPCPDFRKGACRRGDMCEYAHGVFECWLHPAQYRTRL
Sbjct: 239  ECPFVHPGENARRRDPRKFHYSCVPCPDFRKGACRRGDMCEYAHGVFECWLHPAQYRTRL 298

Query: 677  CKDVTSCERRVCFFAHTPDELRPLYVSTGXXXXXXXXXXXXXXXXXXXXXMNLLPGXXXX 498
            CKD TSC RRVCFFAHT +ELRPLYVSTG                     M+L PG    
Sbjct: 299  CKDGTSCNRRVCFFAHTAEELRPLYVSTGSAVPSPRSSASTPNVMDMAAAMSLFPGSPSS 358

Query: 497  XXXXXXXAFNQPMSPSGNG-AHSSLAWPQPNVPTLHLPGSNMQXXXXXXXXSARDIPPED 321
                    F QPMSPS +G +HSS AWPQPNVP LHLPGSN+Q        SARD+PPED
Sbjct: 359  ISSMSPSPFAQPMSPSTSGISHSSNAWPQPNVPALHLPGSNIQTSRLRSSLSARDMPPED 418

Query: 320  LHLLQDMDAHQLLLNDLACLSQSRPSPVSLNRSGRPKTLTPSNLEELFSAELASSPRYSD 141
            L +LQD D  Q LLNDL C SQ  P  +S++RSGR KTLTPSNL+ELFSAE++SSPRYSD
Sbjct: 419  LDVLQDFDGQQHLLNDLGCFSQPHPGGISVSRSGRSKTLTPSNLDELFSAEISSSPRYSD 478

Query: 140  QAASASAFSPSHRSAVFNQFQQQQNMLSPINTNVFSPKNADHPLLQ 3
             A  AS FSP+H+SA+ NQFQQ Q+ LSPINT+V SP+N +HPL Q
Sbjct: 479  PAV-ASVFSPTHKSAIMNQFQQLQSSLSPINTSVLSPRNVEHPLFQ 523


>ref|XP_002279202.2| PREDICTED: zinc finger CCCH domain-containing protein 30 [Vitis
            vinifera]
          Length = 740

 Score =  394 bits (1013), Expect = e-107
 Identities = 197/287 (68%), Positives = 219/287 (76%), Gaps = 2/287 (0%)
 Frame = -3

Query: 857  ECPFVHPGENARRRDPRKFHYSCVPCPDFRKGACRRGDMCEYAHGVFECWLHPAQYRTRL 678
            ECPFVHPGENARRRDPRKFHYSCVPCPDFRKGACRRGD+CEYAHGVFECWLHPAQYRTRL
Sbjct: 287  ECPFVHPGENARRRDPRKFHYSCVPCPDFRKGACRRGDLCEYAHGVFECWLHPAQYRTRL 346

Query: 677  CKDVTSCERRVCFFAHTPDELRPLYVSTGXXXXXXXXXXXXXXXXXXXXXMNLLPGXXXX 498
            CKD T+C RRVCFFAHT +ELRPLY+STG                     ++LLPG    
Sbjct: 347  CKDGTNCARRVCFFAHTSEELRPLYLSTG-SAVPSPRASGPANAMDMAAALSLLPGSPSS 405

Query: 497  XXXXXXXAFNQPMSPSGNG-AHSSLAWPQPNVPTLHLPGSNMQXXXXXXXXSARDIPPED 321
                    F QPMSPS NG +HSS AWPQPNVPTL+LPGSN Q        +ARDIPPED
Sbjct: 406  VSVMSPSPFAQPMSPSANGISHSSGAWPQPNVPTLNLPGSNFQSSRLRSSLNARDIPPED 465

Query: 320  LHLLQDMDAHQLLLNDLACLSQSRPSPVSLNRSGRPKTLTPSNLEELFSAELASSPRYSD 141
             ++L D DA Q LLNDL+C SQ R +  SL+RS R KTLTPSNLEELFSAE++SSPRYSD
Sbjct: 466  FNMLLDFDAQQQLLNDLSCFSQPRTNAASLSRSARSKTLTPSNLEELFSAEISSSPRYSD 525

Query: 140  QAASASAFSPSHRSAVFNQF-QQQQNMLSPINTNVFSPKNADHPLLQ 3
               S++ FSPSH+SA+ NQF QQQQ+MLSPINTNVFSPKN +HPLLQ
Sbjct: 526  ---SSAVFSPSHKSAILNQFQQQQQSMLSPINTNVFSPKNVEHPLLQ 569


>gb|ADE74631.1| unknown [Vitis vinifera]
          Length = 740

 Score =  394 bits (1013), Expect = e-107
 Identities = 197/287 (68%), Positives = 219/287 (76%), Gaps = 2/287 (0%)
 Frame = -3

Query: 857  ECPFVHPGENARRRDPRKFHYSCVPCPDFRKGACRRGDMCEYAHGVFECWLHPAQYRTRL 678
            ECPFVHPGENARRRDPRKFHYSCVPCPDFRKGACRRGD+CEYAHGVFECWLHPAQYRTRL
Sbjct: 287  ECPFVHPGENARRRDPRKFHYSCVPCPDFRKGACRRGDLCEYAHGVFECWLHPAQYRTRL 346

Query: 677  CKDVTSCERRVCFFAHTPDELRPLYVSTGXXXXXXXXXXXXXXXXXXXXXMNLLPGXXXX 498
            CKD T+C RRVCFFAHT +ELRPLY+STG                     ++LLPG    
Sbjct: 347  CKDGTNCARRVCFFAHTSEELRPLYLSTG-SAVPSPRASGPANAMDMAAALSLLPGSPSS 405

Query: 497  XXXXXXXAFNQPMSPSGNG-AHSSLAWPQPNVPTLHLPGSNMQXXXXXXXXSARDIPPED 321
                    F QPMSPS NG +HSS AWPQPNVPTL+LPGSN Q        +ARDIPPED
Sbjct: 406  VSVMSPSPFAQPMSPSANGISHSSGAWPQPNVPTLNLPGSNFQSSRLRSSLNARDIPPED 465

Query: 320  LHLLQDMDAHQLLLNDLACLSQSRPSPVSLNRSGRPKTLTPSNLEELFSAELASSPRYSD 141
             ++L D DA Q LLNDL+C SQ R +  SL+RS R KTLTPSNLEELFSAE++SSPRYSD
Sbjct: 466  FNMLLDFDAQQQLLNDLSCFSQPRTNAASLSRSARSKTLTPSNLEELFSAEISSSPRYSD 525

Query: 140  QAASASAFSPSHRSAVFNQF-QQQQNMLSPINTNVFSPKNADHPLLQ 3
               S++ FSPSH+SA+ NQF QQQQ+MLSPINTNVFSPKN +HPLLQ
Sbjct: 526  ---SSAVFSPSHKSAILNQFQQQQQSMLSPINTNVFSPKNVEHPLLQ 569


>ref|XP_003533897.1| PREDICTED: zinc finger CCCH domain-containing protein 30-like
            [Glycine max]
          Length = 701

 Score =  392 bits (1008), Expect = e-107
 Identities = 193/286 (67%), Positives = 213/286 (74%), Gaps = 1/286 (0%)
 Frame = -3

Query: 857  ECPFVHPGENARRRDPRKFHYSCVPCPDFRKGACRRGDMCEYAHGVFECWLHPAQYRTRL 678
            ECPFVHPGENARRRDPRKFHYSCVPCPDFRKGACRRGDMCEYAHGVFECWLHPAQYRTRL
Sbjct: 251  ECPFVHPGENARRRDPRKFHYSCVPCPDFRKGACRRGDMCEYAHGVFECWLHPAQYRTRL 310

Query: 677  CKDVTSCERRVCFFAHTPDELRPLYVSTGXXXXXXXXXXXXXXXXXXXXXMNLLPGXXXX 498
            CKD TSC RRVCFFAHT +ELRPLYVSTG                     M+L PG    
Sbjct: 311  CKDGTSCNRRVCFFAHTAEELRPLYVSTGSAVPSPRSSASTPNVMDMAAAMSLFPGSPSS 370

Query: 497  XXXXXXXAFNQPMSPSGNG-AHSSLAWPQPNVPTLHLPGSNMQXXXXXXXXSARDIPPED 321
                    F QPMSPS +G +HSS AWPQPNVP LHLPGSN+Q        SARD+PPED
Sbjct: 371  ISSMSPSPFAQPMSPSTSGISHSSNAWPQPNVPALHLPGSNIQTSRLRSSLSARDMPPED 430

Query: 320  LHLLQDMDAHQLLLNDLACLSQSRPSPVSLNRSGRPKTLTPSNLEELFSAELASSPRYSD 141
              +LQD D  Q LL+DL C SQ RP  +S++RSGR KTLTPSNL+ELFSAE++SSPRYSD
Sbjct: 431  FDVLQDFDGQQHLLSDLGCFSQPRPGAISVSRSGRSKTLTPSNLDELFSAEISSSPRYSD 490

Query: 140  QAASASAFSPSHRSAVFNQFQQQQNMLSPINTNVFSPKNADHPLLQ 3
             A  AS FSP H+S + NQFQQ Q+ LSPINT+V SP+N +HPLLQ
Sbjct: 491  PAV-ASVFSPRHKSTIMNQFQQLQSSLSPINTSVSSPRNVEHPLLQ 535


>ref|XP_004136593.1| PREDICTED: zinc finger CCCH domain-containing protein 30-like
            [Cucumis sativus] gi|449516906|ref|XP_004165487.1|
            PREDICTED: zinc finger CCCH domain-containing protein
            30-like isoform 1 [Cucumis sativus]
            gi|449516908|ref|XP_004165488.1| PREDICTED: zinc finger
            CCCH domain-containing protein 30-like isoform 2 [Cucumis
            sativus]
          Length = 701

 Score =  392 bits (1006), Expect = e-107
 Identities = 199/287 (69%), Positives = 214/287 (74%), Gaps = 2/287 (0%)
 Frame = -3

Query: 857  ECPFVHPGENARRRDPRKFHYSCVPCPDFRKGACRRGDMCEYAHGVFECWLHPAQYRTRL 678
            ECPFVHPGENARRRDPRKFHYSCVPCPDFRKGACRRGDMCEYAHGVFECWLHPAQYRTRL
Sbjct: 252  ECPFVHPGENARRRDPRKFHYSCVPCPDFRKGACRRGDMCEYAHGVFECWLHPAQYRTRL 311

Query: 677  CKDVTSCERRVCFFAHTPDELRPLYVSTGXXXXXXXXXXXXXXXXXXXXXMNLLPGXXXX 498
            CKD T+C RRVCFFAHT DELRPLYVSTG                     MNLLPG    
Sbjct: 312  CKDGTNCSRRVCFFAHTTDELRPLYVSTGSAVPSPRSCTSGASAMDYTTVMNLLPGSPSS 371

Query: 497  XXXXXXXAFNQPMSPSGNG-AHSSLAWPQPNVPTLHLPGSNMQXXXXXXXXSARDIPPED 321
                    F  PMSPS NG +HSS+ WPQPNVP LHLPGSN+Q        SARD+P ED
Sbjct: 372  VPVMSPSPFTPPMSPSANGMSHSSVPWPQPNVPALHLPGSNIQSSRLRSSLSARDMPVED 431

Query: 320  LHLLQDMD-AHQLLLNDLACLSQSRPSPVSLNRSGRPKTLTPSNLEELFSAELASSPRYS 144
               L D D   Q LLNDL CLSQ   S  SLNRSGR KT+TPSNL++LFSAE +SSPRYS
Sbjct: 432  FDYLSDFDMQQQQLLNDLNCLSQPPLSSNSLNRSGRMKTMTPSNLDDLFSAE-SSSPRYS 490

Query: 143  DQAASASAFSPSHRSAVFNQFQQQQNMLSPINTNVFSPKNADHPLLQ 3
            DQ+ +++ FSP+H+SAV NQFQQQQNMLSPINTN FSPKN DHPLLQ
Sbjct: 491  DQSLASAVFSPTHKSAVINQFQQQQNMLSPINTN-FSPKNVDHPLLQ 536


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