BLASTX nr result

ID: Cnidium21_contig00011828 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00011828
         (927 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268449.2| PREDICTED: protein YIF1B [Vitis vinifera]         435   e-120
emb|CBI36691.3| unnamed protein product [Vitis vinifera]              435   e-120
ref|XP_002534138.1| Protein YIF1A, putative [Ricinus communis] g...   418   e-115
ref|NP_564367.1| integral membrane HRF1-like protein [Arabidopsi...   413   e-113
ref|XP_004152088.1| PREDICTED: protein YIF1B-A-like [Cucumis sat...   412   e-113

>ref|XP_002268449.2| PREDICTED: protein YIF1B [Vitis vinifera]
          Length = 348

 Score =  435 bits (1118), Expect = e-120
 Identities = 206/234 (88%), Positives = 214/234 (91%)
 Frame = +1

Query: 1   RGGLGAYGEKILGSSSEYVQSNISRYFSDPQYYFQVNDHYVRNKLKVVLFPFLHRGHWTR 180
           RGGLGAYGEKILGSSSEYVQSNISRYFSDPQYYFQVNDHYVRNKLKVVLFPFLHRGHWTR
Sbjct: 115 RGGLGAYGEKILGSSSEYVQSNISRYFSDPQYYFQVNDHYVRNKLKVVLFPFLHRGHWTR 174

Query: 181 ITEPVGGRLSYKPPIYDINAPDLYIPFMAFGTYVVLAGFSLGLHGKFTPEALNWLFIKGL 360
           ITEPVGGRLSYKPPIYDINAPDLYIPFMAFGTYV+LAG SLGL GKFTPEALNWLFIKGL
Sbjct: 175 ITEPVGGRLSYKPPIYDINAPDLYIPFMAFGTYVILAGLSLGLRGKFTPEALNWLFIKGL 234

Query: 361 VGWFLQVSLLKMSLFSLGGGEAPLLDIVAYAGYTFTGMCLAVFVKIVWSYSYYFLMPWMC 540
           VGW LQVSLLK+SL SLG GEAPLLDIVAYAGYTFTGMCLAVF +I WSYSYYFLMPW C
Sbjct: 235 VGWCLQVSLLKVSLLSLGSGEAPLLDIVAYAGYTFTGMCLAVFGRIAWSYSYYFLMPWAC 294

Query: 541 LCMGIFLVKTMKRVLFAEVRTYDSSRHHYXXXXXXXXXXXXYVWLGNISLNWLF 702
           LCMGIFLVKTMKRVLFAEVR+YDSSRHHY            ++WLGNIS++WLF
Sbjct: 295 LCMGIFLVKTMKRVLFAEVRSYDSSRHHYLLLFIALAQLPLFIWLGNISVHWLF 348


>emb|CBI36691.3| unnamed protein product [Vitis vinifera]
          Length = 337

 Score =  435 bits (1118), Expect = e-120
 Identities = 206/234 (88%), Positives = 214/234 (91%)
 Frame = +1

Query: 1   RGGLGAYGEKILGSSSEYVQSNISRYFSDPQYYFQVNDHYVRNKLKVVLFPFLHRGHWTR 180
           RGGLGAYGEKILGSSSEYVQSNISRYFSDPQYYFQVNDHYVRNKLKVVLFPFLHRGHWTR
Sbjct: 104 RGGLGAYGEKILGSSSEYVQSNISRYFSDPQYYFQVNDHYVRNKLKVVLFPFLHRGHWTR 163

Query: 181 ITEPVGGRLSYKPPIYDINAPDLYIPFMAFGTYVVLAGFSLGLHGKFTPEALNWLFIKGL 360
           ITEPVGGRLSYKPPIYDINAPDLYIPFMAFGTYV+LAG SLGL GKFTPEALNWLFIKGL
Sbjct: 164 ITEPVGGRLSYKPPIYDINAPDLYIPFMAFGTYVILAGLSLGLRGKFTPEALNWLFIKGL 223

Query: 361 VGWFLQVSLLKMSLFSLGGGEAPLLDIVAYAGYTFTGMCLAVFVKIVWSYSYYFLMPWMC 540
           VGW LQVSLLK+SL SLG GEAPLLDIVAYAGYTFTGMCLAVF +I WSYSYYFLMPW C
Sbjct: 224 VGWCLQVSLLKVSLLSLGSGEAPLLDIVAYAGYTFTGMCLAVFGRIAWSYSYYFLMPWAC 283

Query: 541 LCMGIFLVKTMKRVLFAEVRTYDSSRHHYXXXXXXXXXXXXYVWLGNISLNWLF 702
           LCMGIFLVKTMKRVLFAEVR+YDSSRHHY            ++WLGNIS++WLF
Sbjct: 284 LCMGIFLVKTMKRVLFAEVRSYDSSRHHYLLLFIALAQLPLFIWLGNISVHWLF 337


>ref|XP_002534138.1| Protein YIF1A, putative [Ricinus communis]
           gi|223525796|gb|EEF28242.1| Protein YIF1A, putative
           [Ricinus communis]
          Length = 269

 Score =  418 bits (1075), Expect = e-115
 Identities = 196/234 (83%), Positives = 211/234 (90%)
 Frame = +1

Query: 1   RGGLGAYGEKILGSSSEYVQSNISRYFSDPQYYFQVNDHYVRNKLKVVLFPFLHRGHWTR 180
           RGGLGAYGEKILGSSSEYVQSNISRYFSDPQYYFQVND YVRNKLKVVLFPFLHRGHWTR
Sbjct: 36  RGGLGAYGEKILGSSSEYVQSNISRYFSDPQYYFQVNDQYVRNKLKVVLFPFLHRGHWTR 95

Query: 181 ITEPVGGRLSYKPPIYDINAPDLYIPFMAFGTYVVLAGFSLGLHGKFTPEALNWLFIKGL 360
           ITEPVGGRLSYKPPIYDINAPDLYIPFMAFGTY+VLAG SLGL+GKF+PE LNWLF+KGL
Sbjct: 96  ITEPVGGRLSYKPPIYDINAPDLYIPFMAFGTYIVLAGLSLGLNGKFSPENLNWLFVKGL 155

Query: 361 VGWFLQVSLLKMSLFSLGGGEAPLLDIVAYAGYTFTGMCLAVFVKIVWSYSYYFLMPWMC 540
           +GWF+QV+LLK++L SLG GEAPLLDIVAYAGYTFTGMC+AV  +I  +YSYYFLMPW C
Sbjct: 156 LGWFMQVALLKVTLLSLGSGEAPLLDIVAYAGYTFTGMCIAVLGRIFINYSYYFLMPWAC 215

Query: 541 LCMGIFLVKTMKRVLFAEVRTYDSSRHHYXXXXXXXXXXXXYVWLGNISLNWLF 702
           LCMGIFLVKTMKRVLFAEVRTYDSSRHHY            + WLGNI++NWLF
Sbjct: 216 LCMGIFLVKTMKRVLFAEVRTYDSSRHHYLLLFIALAQFPLFTWLGNITINWLF 269


>ref|NP_564367.1| integral membrane HRF1-like protein [Arabidopsis thaliana]
           gi|145324088|ref|NP_001077633.1| integral membrane
           HRF1-like protein [Arabidopsis thaliana]
           gi|14532658|gb|AAK64057.1| unknown protein [Arabidopsis
           thaliana] gi|21280943|gb|AAM44952.1| unknown protein
           [Arabidopsis thaliana] gi|21554340|gb|AAM63447.1|
           unknown [Arabidopsis thaliana]
           gi|332193168|gb|AEE31289.1| integral membrane HRF1-like
           protein [Arabidopsis thaliana]
           gi|332193169|gb|AEE31290.1| integral membrane HRF1-like
           protein [Arabidopsis thaliana]
          Length = 269

 Score =  413 bits (1061), Expect = e-113
 Identities = 194/233 (83%), Positives = 206/233 (88%)
 Frame = +1

Query: 1   RGGLGAYGEKILGSSSEYVQSNISRYFSDPQYYFQVNDHYVRNKLKVVLFPFLHRGHWTR 180
           RGGLGAYGE+ILGSSSEYVQSNISRYFSDPQYYFQVND YVRNKLKVVLFPFLHRGHWTR
Sbjct: 36  RGGLGAYGERILGSSSEYVQSNISRYFSDPQYYFQVNDQYVRNKLKVVLFPFLHRGHWTR 95

Query: 181 ITEPVGGRLSYKPPIYDINAPDLYIPFMAFGTYVVLAGFSLGLHGKFTPEALNWLFIKGL 360
           I+EPVGGRLSYKPPIYDINAPDLYIPFMAFGTYVVLAG SLGL+GKFTPEALNWLF+KGL
Sbjct: 96  ISEPVGGRLSYKPPIYDINAPDLYIPFMAFGTYVVLAGLSLGLNGKFTPEALNWLFVKGL 155

Query: 361 VGWFLQVSLLKMSLFSLGGGEAPLLDIVAYAGYTFTGMCLAVFVKIVWSYSYYFLMPWMC 540
           VGWFLQV LLK++L SLG GEAPLLDIVAY GY F G+CLA F KI+W YSYY LMPW C
Sbjct: 156 VGWFLQVMLLKVTLLSLGSGEAPLLDIVAYGGYAFAGLCLAGFAKIMWGYSYYALMPWTC 215

Query: 541 LCMGIFLVKTMKRVLFAEVRTYDSSRHHYXXXXXXXXXXXXYVWLGNISLNWL 699
           LC GIFLVKTMKRVLFAEVR+YDSS+HHY             +WLGNIS+NWL
Sbjct: 216 LCTGIFLVKTMKRVLFAEVRSYDSSKHHYLLLFLALVQFPLLIWLGNISVNWL 268


>ref|XP_004152088.1| PREDICTED: protein YIF1B-A-like [Cucumis sativus]
           gi|449502274|ref|XP_004161595.1| PREDICTED: protein
           YIF1B-A-like [Cucumis sativus]
          Length = 269

 Score =  412 bits (1058), Expect = e-113
 Identities = 194/233 (83%), Positives = 206/233 (88%)
 Frame = +1

Query: 1   RGGLGAYGEKILGSSSEYVQSNISRYFSDPQYYFQVNDHYVRNKLKVVLFPFLHRGHWTR 180
           RGGLGAYGEKI GSSSEYVQSNISRYFSDPQYYFQVND YVRNKLKVVLFPFLHRGHWTR
Sbjct: 36  RGGLGAYGEKIFGSSSEYVQSNISRYFSDPQYYFQVNDQYVRNKLKVVLFPFLHRGHWTR 95

Query: 181 ITEPVGGRLSYKPPIYDINAPDLYIPFMAFGTYVVLAGFSLGLHGKFTPEALNWLFIKGL 360
           IT+P+GGRLSYKPPIYDINAPDLYIPFMAFGTYVVLAGFSLGL GKFTPEAL+WLFIKGL
Sbjct: 96  ITDPIGGRLSYKPPIYDINAPDLYIPFMAFGTYVVLAGFSLGLQGKFTPEALSWLFIKGL 155

Query: 361 VGWFLQVSLLKMSLFSLGGGEAPLLDIVAYAGYTFTGMCLAVFVKIVWSYSYYFLMPWMC 540
           +GWF+QV LLK++L SLG GEAPLLDIVAYAGY FTG+CLA   +I   YSYYFLMPWM 
Sbjct: 156 LGWFMQVMLLKVTLLSLGSGEAPLLDIVAYAGYAFTGLCLAAIGRISLKYSYYFLMPWMA 215

Query: 541 LCMGIFLVKTMKRVLFAEVRTYDSSRHHYXXXXXXXXXXXXYVWLGNISLNWL 699
           LCMGIFLVKTMKRVLFAEVRTYDSSRHHY            + WLGN+S+NWL
Sbjct: 216 LCMGIFLVKTMKRVLFAEVRTYDSSRHHYLLLFIALAQFPLFTWLGNVSVNWL 268


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