BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00011827
         (530 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004147236.1| PREDICTED: ATP-dependent Clp protease proteo...   184   7e-45
emb|CAB10484.1| Clp proteinase like protein [Arabidopsis thalian...   182   2e-44
ref|NP_567521.1| ATP-dependent Clp protease proteolytic subunit-...   182   2e-44
ref|XP_002868088.1| hypothetical protein ARALYDRAFT_493172 [Arab...   182   3e-44
ref|XP_002329556.1| predicted protein [Populus trichocarpa] gi|1...   181   5e-44

>ref|XP_004147236.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit-related
           protein 4, chloroplastic-like [Cucumis sativus]
           gi|449510487|ref|XP_004163680.1| PREDICTED:
           ATP-dependent Clp protease proteolytic subunit-related
           protein 4, chloroplastic-like [Cucumis sativus]
          Length = 304

 Score =  184 bits (467), Expect = 7e-45
 Identities = 91/117 (77%), Positives = 99/117 (84%)
 Frame = -1

Query: 353 ASASATSLSTNFVSSYTSGSVSGDFSGQKIRPLSLNPHAPRSSSPKRGVVTMVIPFSRGS 174
           +S     LSTNF+  +  GSVSG+FSG K+RP SLNP+    S  KRGVVTMVIPF+RGS
Sbjct: 37  SSVRMAPLSTNFLIPFAGGSVSGEFSGVKLRPSSLNPNYSPGSKGKRGVVTMVIPFARGS 96

Query: 173 AWEQPPPDLASYLYKNRIVYLGMSLVPSVTELILAEFLYLQYEDEEKPIYLYINSTG 3
           AWEQPPPDLASYLYKNRIVYLGMSLVPSVTELILAEFLYLQYEDE KPIYLY+NSTG
Sbjct: 97  AWEQPPPDLASYLYKNRIVYLGMSLVPSVTELILAEFLYLQYEDETKPIYLYVNSTG 153


>emb|CAB10484.1| Clp proteinase like protein [Arabidopsis thaliana]
           gi|7268455|emb|CAB80975.1| Clp proteinase like protein
           [Arabidopsis thaliana]
          Length = 241

 Score =  182 bits (463), Expect = 2e-44
 Identities = 95/125 (76%), Positives = 105/125 (84%), Gaps = 3/125 (2%)
 Frame = -1

Query: 368 RTRPRASASAT---SLSTNFVSSYTSGSVSGDFSGQKIRPLSLNPHAPRSSSPKRGVVTM 198
           R++PR S+S++   SLS  F+S YT GS+S D  G K+R  SLNP    SS PKRGVVTM
Sbjct: 30  RSKPRFSSSSSLRASLSNGFLSPYTGGSISSDLCGAKLRAESLNPLNFSSSKPKRGVVTM 89

Query: 197 VIPFSRGSAWEQPPPDLASYLYKNRIVYLGMSLVPSVTELILAEFLYLQYEDEEKPIYLY 18
           VIPFS+GSA EQPPPDLASYL+KNRIVYLGMSLVPSVTELILAEFLYLQYEDEEKPIYLY
Sbjct: 90  VIPFSKGSAHEQPPPDLASYLFKNRIVYLGMSLVPSVTELILAEFLYLQYEDEEKPIYLY 149

Query: 17  INSTG 3
           INSTG
Sbjct: 150 INSTG 154


>ref|NP_567521.1| ATP-dependent Clp protease proteolytic subunit-related protein 4
           [Arabidopsis thaliana]
           gi|75301253|sp|Q8LB10.1|CLPR4_ARATH RecName:
           Full=ATP-dependent Clp protease proteolytic
           subunit-related protein 4, chloroplastic; Short=ClpR4;
           Flags: Precursor gi|21593086|gb|AAM65035.1|
           ATP-dependent Clp protease proteolytic subunit ClpR4,
           putative [Arabidopsis thaliana]
           gi|26450085|dbj|BAC42162.1| putative ClpP protease
           complex subunit ClpR4 [Arabidopsis thaliana]
           gi|332658442|gb|AEE83842.1| ATP-dependent Clp protease
           proteolytic subunit-related protein 4 [Arabidopsis
           thaliana]
          Length = 305

 Score =  182 bits (463), Expect = 2e-44
 Identities = 95/125 (76%), Positives = 105/125 (84%), Gaps = 3/125 (2%)
 Frame = -1

Query: 368 RTRPRASASAT---SLSTNFVSSYTSGSVSGDFSGQKIRPLSLNPHAPRSSSPKRGVVTM 198
           R++PR S+S++   SLS  F+S YT GS+S D  G K+R  SLNP    SS PKRGVVTM
Sbjct: 30  RSKPRFSSSSSLRASLSNGFLSPYTGGSISSDLCGAKLRAESLNPLNFSSSKPKRGVVTM 89

Query: 197 VIPFSRGSAWEQPPPDLASYLYKNRIVYLGMSLVPSVTELILAEFLYLQYEDEEKPIYLY 18
           VIPFS+GSA EQPPPDLASYL+KNRIVYLGMSLVPSVTELILAEFLYLQYEDEEKPIYLY
Sbjct: 90  VIPFSKGSAHEQPPPDLASYLFKNRIVYLGMSLVPSVTELILAEFLYLQYEDEEKPIYLY 149

Query: 17  INSTG 3
           INSTG
Sbjct: 150 INSTG 154


>ref|XP_002868088.1| hypothetical protein ARALYDRAFT_493172 [Arabidopsis lyrata subsp.
           lyrata] gi|297313924|gb|EFH44347.1| hypothetical protein
           ARALYDRAFT_493172 [Arabidopsis lyrata subsp. lyrata]
          Length = 305

 Score =  182 bits (462), Expect = 3e-44
 Identities = 95/125 (76%), Positives = 105/125 (84%), Gaps = 3/125 (2%)
 Frame = -1

Query: 368 RTRPRASASAT---SLSTNFVSSYTSGSVSGDFSGQKIRPLSLNPHAPRSSSPKRGVVTM 198
           R++ R S+S++   SLS  F+S YT GS+S DF G K+R  SLNP    SS PKRGVVTM
Sbjct: 30  RSKARFSSSSSLRASLSNGFLSPYTGGSISSDFCGAKLRAESLNPLNLSSSKPKRGVVTM 89

Query: 197 VIPFSRGSAWEQPPPDLASYLYKNRIVYLGMSLVPSVTELILAEFLYLQYEDEEKPIYLY 18
           VIPFS+GSA EQPPPDLASYL+KNRIVYLGMSLVPSVTELILAEFLYLQYEDEEKPIYLY
Sbjct: 90  VIPFSKGSAHEQPPPDLASYLFKNRIVYLGMSLVPSVTELILAEFLYLQYEDEEKPIYLY 149

Query: 17  INSTG 3
           INSTG
Sbjct: 150 INSTG 154


>ref|XP_002329556.1| predicted protein [Populus trichocarpa] gi|118483146|gb|ABK93479.1|
           unknown [Populus trichocarpa]
           gi|222870265|gb|EEF07396.1| predicted protein [Populus
           trichocarpa]
          Length = 310

 Score =  181 bits (460), Expect = 5e-44
 Identities = 91/117 (77%), Positives = 101/117 (86%)
 Frame = -1

Query: 353 ASASATSLSTNFVSSYTSGSVSGDFSGQKIRPLSLNPHAPRSSSPKRGVVTMVIPFSRGS 174
           +S+S  SLST F+S +  GS++ DFSG KIRP  LNP +  SS  KR VVTMVIP++RGS
Sbjct: 43  SSSSRASLSTCFLSPFAGGSITCDFSGTKIRPECLNPASISSSKGKRSVVTMVIPYTRGS 102

Query: 173 AWEQPPPDLASYLYKNRIVYLGMSLVPSVTELILAEFLYLQYEDEEKPIYLYINSTG 3
           AWEQPPPDLASYL+KNRIVYLGMSLVPSVTELILAEFLYLQYEDEEKPIYLYINSTG
Sbjct: 103 AWEQPPPDLASYLFKNRIVYLGMSLVPSVTELILAEFLYLQYEDEEKPIYLYINSTG 159