BLASTX nr result

ID: Cnidium21_contig00011806 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00011806
         (910 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268449.2| PREDICTED: protein YIF1B [Vitis vinifera]         424   e-116
emb|CBI36691.3| unnamed protein product [Vitis vinifera]              424   e-116
ref|XP_002534138.1| Protein YIF1A, putative [Ricinus communis] g...   406   e-111
ref|NP_191509.2| YIF1 integral membrane domain-containing protei...   402   e-110
emb|CAB75447.1| putative protein [Arabidopsis thaliana]               402   e-110

>ref|XP_002268449.2| PREDICTED: protein YIF1B [Vitis vinifera]
          Length = 348

 Score =  424 bits (1091), Expect = e-116
 Identities = 198/215 (92%), Positives = 208/215 (96%)
 Frame = -3

Query: 908 QSNISRYFSDPQYYFQVNDHYVRNKLKVVLFPFLHRGHWTRITEPVGGRLSYKPPIYDIN 729
           QSNISRYFSDPQYYFQVNDHYVRNKLKVVLFPFLHRGHWTRITEPVGGRLSYKPPIYDIN
Sbjct: 134 QSNISRYFSDPQYYFQVNDHYVRNKLKVVLFPFLHRGHWTRITEPVGGRLSYKPPIYDIN 193

Query: 728 APDLYIPFMAFGTYVVLAGFLLGLHGKFTPEALNWLFIKGLVGWFLQVSLLKMSLFSLGS 549
           APDLYIPFMAFGTYV+LAG  LGL GKFTPEALNWLFIKGLVGW LQVSLLK+SL SLGS
Sbjct: 194 APDLYIPFMAFGTYVILAGLSLGLRGKFTPEALNWLFIKGLVGWCLQVSLLKVSLLSLGS 253

Query: 548 GEAPLLDIVAYAGYTFTGMCMAVFGKIVWSYSYYFLMPWTCLCMGIFLVKTMKRVLFAEV 369
           GEAPLLDIVAYAGYTFTGMC+AVFG+I WSYSYYFLMPW CLCMGIFLVKTMKRVLFAEV
Sbjct: 254 GEAPLLDIVAYAGYTFTGMCLAVFGRIAWSYSYYFLMPWACLCMGIFLVKTMKRVLFAEV 313

Query: 368 RTYDSSRHHYLLLFIAVAQLPLYVWLGNISMNWLF 264
           R+YDSSRHHYLLLFIA+AQLPL++WLGNIS++WLF
Sbjct: 314 RSYDSSRHHYLLLFIALAQLPLFIWLGNISVHWLF 348


>emb|CBI36691.3| unnamed protein product [Vitis vinifera]
          Length = 337

 Score =  424 bits (1091), Expect = e-116
 Identities = 198/215 (92%), Positives = 208/215 (96%)
 Frame = -3

Query: 908 QSNISRYFSDPQYYFQVNDHYVRNKLKVVLFPFLHRGHWTRITEPVGGRLSYKPPIYDIN 729
           QSNISRYFSDPQYYFQVNDHYVRNKLKVVLFPFLHRGHWTRITEPVGGRLSYKPPIYDIN
Sbjct: 123 QSNISRYFSDPQYYFQVNDHYVRNKLKVVLFPFLHRGHWTRITEPVGGRLSYKPPIYDIN 182

Query: 728 APDLYIPFMAFGTYVVLAGFLLGLHGKFTPEALNWLFIKGLVGWFLQVSLLKMSLFSLGS 549
           APDLYIPFMAFGTYV+LAG  LGL GKFTPEALNWLFIKGLVGW LQVSLLK+SL SLGS
Sbjct: 183 APDLYIPFMAFGTYVILAGLSLGLRGKFTPEALNWLFIKGLVGWCLQVSLLKVSLLSLGS 242

Query: 548 GEAPLLDIVAYAGYTFTGMCMAVFGKIVWSYSYYFLMPWTCLCMGIFLVKTMKRVLFAEV 369
           GEAPLLDIVAYAGYTFTGMC+AVFG+I WSYSYYFLMPW CLCMGIFLVKTMKRVLFAEV
Sbjct: 243 GEAPLLDIVAYAGYTFTGMCLAVFGRIAWSYSYYFLMPWACLCMGIFLVKTMKRVLFAEV 302

Query: 368 RTYDSSRHHYLLLFIAVAQLPLYVWLGNISMNWLF 264
           R+YDSSRHHYLLLFIA+AQLPL++WLGNIS++WLF
Sbjct: 303 RSYDSSRHHYLLLFIALAQLPLFIWLGNISVHWLF 337


>ref|XP_002534138.1| Protein YIF1A, putative [Ricinus communis]
           gi|223525796|gb|EEF28242.1| Protein YIF1A, putative
           [Ricinus communis]
          Length = 269

 Score =  406 bits (1044), Expect = e-111
 Identities = 188/215 (87%), Positives = 204/215 (94%)
 Frame = -3

Query: 908 QSNISRYFSDPQYYFQVNDHYVRNKLKVVLFPFLHRGHWTRITEPVGGRLSYKPPIYDIN 729
           QSNISRYFSDPQYYFQVND YVRNKLKVVLFPFLHRGHWTRITEPVGGRLSYKPPIYDIN
Sbjct: 55  QSNISRYFSDPQYYFQVNDQYVRNKLKVVLFPFLHRGHWTRITEPVGGRLSYKPPIYDIN 114

Query: 728 APDLYIPFMAFGTYVVLAGFLLGLHGKFTPEALNWLFIKGLVGWFLQVSLLKMSLFSLGS 549
           APDLYIPFMAFGTY+VLAG  LGL+GKF+PE LNWLF+KGL+GWF+QV+LLK++L SLGS
Sbjct: 115 APDLYIPFMAFGTYIVLAGLSLGLNGKFSPENLNWLFVKGLLGWFMQVALLKVTLLSLGS 174

Query: 548 GEAPLLDIVAYAGYTFTGMCMAVFGKIVWSYSYYFLMPWTCLCMGIFLVKTMKRVLFAEV 369
           GEAPLLDIVAYAGYTFTGMC+AV G+I  +YSYYFLMPW CLCMGIFLVKTMKRVLFAEV
Sbjct: 175 GEAPLLDIVAYAGYTFTGMCIAVLGRIFINYSYYFLMPWACLCMGIFLVKTMKRVLFAEV 234

Query: 368 RTYDSSRHHYLLLFIAVAQLPLYVWLGNISMNWLF 264
           RTYDSSRHHYLLLFIA+AQ PL+ WLGNI++NWLF
Sbjct: 235 RTYDSSRHHYLLLFIALAQFPLFTWLGNITINWLF 269


>ref|NP_191509.2| YIF1 integral membrane domain-containing protein [Arabidopsis
           thaliana] gi|332646412|gb|AEE79933.1| YIF1 integral
           membrane domain-containing protein [Arabidopsis
           thaliana] gi|385137882|gb|AFI41202.1| HRF1 protein,
           partial [Arabidopsis thaliana]
          Length = 269

 Score =  402 bits (1034), Expect = e-110
 Identities = 183/215 (85%), Positives = 201/215 (93%)
 Frame = -3

Query: 908 QSNISRYFSDPQYYFQVNDHYVRNKLKVVLFPFLHRGHWTRITEPVGGRLSYKPPIYDIN 729
           QSNISRYFSDPQYYFQVND YVRNKLK+VL PFLHRGHWTRI+EPVGGRLSYKPPIYDIN
Sbjct: 55  QSNISRYFSDPQYYFQVNDQYVRNKLKIVLLPFLHRGHWTRISEPVGGRLSYKPPIYDIN 114

Query: 728 APDLYIPFMAFGTYVVLAGFLLGLHGKFTPEALNWLFIKGLVGWFLQVSLLKMSLFSLGS 549
           APDLYIP MAFGTYVVLAG  LGL+GKFTPEALNWLF+KG+VGWFLQV LLK++L SLGS
Sbjct: 115 APDLYIPLMAFGTYVVLAGLSLGLYGKFTPEALNWLFVKGMVGWFLQVMLLKITLLSLGS 174

Query: 548 GEAPLLDIVAYAGYTFTGMCMAVFGKIVWSYSYYFLMPWTCLCMGIFLVKTMKRVLFAEV 369
           GEAPLLDIVAYAGYTFTG+C+AV GKI+W YSYY L+PWTCLC G+FLVKTMKRVLFAE 
Sbjct: 175 GEAPLLDIVAYAGYTFTGLCLAVLGKIIWGYSYYVLIPWTCLCTGVFLVKTMKRVLFAES 234

Query: 368 RTYDSSRHHYLLLFIAVAQLPLYVWLGNISMNWLF 264
           R+YDSSRHHYLL+F+A+AQ PL +WLGNIS+NWLF
Sbjct: 235 RSYDSSRHHYLLIFVALAQFPLLIWLGNISVNWLF 269


>emb|CAB75447.1| putative protein [Arabidopsis thaliana]
          Length = 259

 Score =  402 bits (1034), Expect = e-110
 Identities = 183/215 (85%), Positives = 201/215 (93%)
 Frame = -3

Query: 908 QSNISRYFSDPQYYFQVNDHYVRNKLKVVLFPFLHRGHWTRITEPVGGRLSYKPPIYDIN 729
           QSNISRYFSDPQYYFQVND YVRNKLK+VL PFLHRGHWTRI+EPVGGRLSYKPPIYDIN
Sbjct: 45  QSNISRYFSDPQYYFQVNDQYVRNKLKIVLLPFLHRGHWTRISEPVGGRLSYKPPIYDIN 104

Query: 728 APDLYIPFMAFGTYVVLAGFLLGLHGKFTPEALNWLFIKGLVGWFLQVSLLKMSLFSLGS 549
           APDLYIP MAFGTYVVLAG  LGL+GKFTPEALNWLF+KG+VGWFLQV LLK++L SLGS
Sbjct: 105 APDLYIPLMAFGTYVVLAGLSLGLYGKFTPEALNWLFVKGMVGWFLQVMLLKITLLSLGS 164

Query: 548 GEAPLLDIVAYAGYTFTGMCMAVFGKIVWSYSYYFLMPWTCLCMGIFLVKTMKRVLFAEV 369
           GEAPLLDIVAYAGYTFTG+C+AV GKI+W YSYY L+PWTCLC G+FLVKTMKRVLFAE 
Sbjct: 165 GEAPLLDIVAYAGYTFTGLCLAVLGKIIWGYSYYVLIPWTCLCTGVFLVKTMKRVLFAES 224

Query: 368 RTYDSSRHHYLLLFIAVAQLPLYVWLGNISMNWLF 264
           R+YDSSRHHYLL+F+A+AQ PL +WLGNIS+NWLF
Sbjct: 225 RSYDSSRHHYLLIFVALAQFPLLIWLGNISVNWLF 259


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