BLASTX nr result
ID: Cnidium21_contig00011794
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cnidium21_contig00011794 (1100 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002281971.1| PREDICTED: DNA-directed RNA polymerase III s... 305 1e-80 ref|XP_002271507.2| PREDICTED: DNA-directed RNA polymerase III s... 304 3e-80 ref|XP_002520987.1| DNA-directed RNA polymerase III 25 kD polype... 263 6e-68 ref|XP_002889618.1| predicted protein [Arabidopsis lyrata subsp.... 261 2e-67 ref|NP_172164.1| RNA polymerase Rpb7 N-terminal domain-containin... 261 3e-67 >ref|XP_002281971.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC8 [Vitis vinifera] gi|297735498|emb|CBI17938.3| unnamed protein product [Vitis vinifera] Length = 192 Score = 305 bits (781), Expect = 1e-80 Identities = 142/191 (74%), Positives = 164/191 (85%) Frame = -3 Query: 903 FYLSEIEHTMRVPPHLLNLPLTEAIQGELERLFLDKVVANLGLVVSVYDIKSINGGFLFP 724 FYLS IEHT+R+PPHLL+LPL EAI+GELE LFLDKV+ANLGL +SVYDI+SI+GGF+FP Sbjct: 2 FYLSLIEHTLRLPPHLLDLPLNEAIKGELESLFLDKVIANLGLCISVYDIRSIDGGFVFP 61 Query: 723 SDGASTYTVNFRLVVFRPFVGEVVTAKLLESTANGLRLSLGFFDDIYVPAHLMPNPSHFE 544 DGASTYTV FRLV+FRPFVGE++TAKL ES ANGLRLSLGFFDDIY+P HLMPNP H E Sbjct: 62 GDGASTYTVEFRLVMFRPFVGEIITAKLKESDANGLRLSLGFFDDIYIPVHLMPNPCHCE 121 Query: 543 ADSVNKNQVSWIWEYQEENYAIYGVDEIRFRVNNISYPPIPIEADKESNRFAPMVITGSL 364 + K QV WIW+YQE+ + I G+DEIRF+V ++SYPPIP+E KES FAPMVI GSL Sbjct: 122 PNPEKKGQVIWIWDYQEQKFPIDGIDEIRFQVQSVSYPPIPVEQPKESKPFAPMVIMGSL 181 Query: 363 DADGLGPVSWW 331 D DGLGPVSWW Sbjct: 182 DYDGLGPVSWW 192 >ref|XP_002271507.2| PREDICTED: DNA-directed RNA polymerase III subunit RPC8-like [Vitis vinifera] gi|296086693|emb|CBI32328.3| unnamed protein product [Vitis vinifera] Length = 192 Score = 304 bits (778), Expect = 3e-80 Identities = 141/191 (73%), Positives = 166/191 (86%) Frame = -3 Query: 903 FYLSEIEHTMRVPPHLLNLPLTEAIQGELERLFLDKVVANLGLVVSVYDIKSINGGFLFP 724 F+LS IEHT+R+PPHLL+LPL EAI+GELE LFLDKV+ANLGL +SVYDI+SI+GGF+FP Sbjct: 2 FFLSLIEHTLRLPPHLLDLPLNEAIKGELESLFLDKVLANLGLCISVYDIRSIDGGFVFP 61 Query: 723 SDGASTYTVNFRLVVFRPFVGEVVTAKLLESTANGLRLSLGFFDDIYVPAHLMPNPSHFE 544 DGASTYTV FRLV+FRPFVGE++TAKL ES ANGL+LSLGFFDDIY+P HLMPNP H E Sbjct: 62 GDGASTYTVEFRLVMFRPFVGEIITAKLKESDANGLQLSLGFFDDIYIPVHLMPNPCHCE 121 Query: 543 ADSVNKNQVSWIWEYQEENYAIYGVDEIRFRVNNISYPPIPIEADKESNRFAPMVITGSL 364 D NK+QV WIW+YQE+ + I G+DEIRF+V ++SYPPIP+E KES FAPM+I GSL Sbjct: 122 PDPENKSQVIWIWDYQEQKFPIDGLDEIRFQVQSVSYPPIPVEQPKESKPFAPMMIMGSL 181 Query: 363 DADGLGPVSWW 331 D DGLGPVSWW Sbjct: 182 DYDGLGPVSWW 192 >ref|XP_002520987.1| DNA-directed RNA polymerase III 25 kD polypeptide, putative [Ricinus communis] gi|223539824|gb|EEF41404.1| DNA-directed RNA polymerase III 25 kD polypeptide, putative [Ricinus communis] Length = 194 Score = 263 bits (672), Expect = 6e-68 Identities = 122/195 (62%), Positives = 158/195 (81%), Gaps = 4/195 (2%) Frame = -3 Query: 903 FYLSEIEHTMRVPPHLLNLPLTEAIQGELERLFLDKVVANLGLVVSVYDIKSINGGFLFP 724 FYLSEIEHT+R+PP LL+LPL +A++ ELE +FLDKV+ANLGL +SVYD+ I+GGF+FP Sbjct: 2 FYLSEIEHTLRLPPSLLSLPLQDAVKKELEIIFLDKVIANLGLCISVYDVTHIDGGFIFP 61 Query: 723 SDGASTYTVNFRLVVFRPFVGEVVTAKLLESTANGLRLSLGFFDDIYVPAHLMPNPSHFE 544 DGASTYTV FR+VVFRPFVGE++ AKL ES +GLRLSLGFFDDIY+P+H +P PS+ + Sbjct: 62 GDGASTYTVRFRIVVFRPFVGEIIVAKLKESNNDGLRLSLGFFDDIYIPSHRLPKPSYSQ 121 Query: 543 ADSVNKNQVSWIWEYQEEN----YAIYGVDEIRFRVNNISYPPIPIEADKESNRFAPMVI 376 D N+ Q WIWE+ E+ + I G+DEI+FRV+++ YPP+P+E ++ FAPMVI Sbjct: 122 QDPENRYQAIWIWEFVSEDNKMEFNIDGLDEIKFRVDSVKYPPVPLE--QQEKPFAPMVI 179 Query: 375 TGSLDADGLGPVSWW 331 TGS+D +GLGPVSWW Sbjct: 180 TGSIDDEGLGPVSWW 194 >ref|XP_002889618.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297335460|gb|EFH65877.1| predicted protein [Arabidopsis lyrata subsp. lyrata] Length = 204 Score = 261 bits (667), Expect = 2e-67 Identities = 123/193 (63%), Positives = 154/193 (79%), Gaps = 2/193 (1%) Frame = -3 Query: 903 FYLSEIEHTMRVPPHLLNLPLTEAIQGELERLFLDKVVANLGLVVSVYDIKSINGGFLFP 724 FYLSE+EH++RVPPHLLNLPL +AI+ L+ +FLDKV+A+LGL VSVYDIKSI GGF+ P Sbjct: 2 FYLSELEHSLRVPPHLLNLPLEDAIKSVLQNVFLDKVLADLGLCVSVYDIKSIEGGFVLP 61 Query: 723 SDGASTYTVNFRLVVFRPFVGEVVTAKLLESTANGLRLSLGFFDDIYVPAHLMPNPSHFE 544 DGA+TY V FR+VVFRPFVGEV+ AK ES +NGLRL+LGFFDDIYVPA LMP P+ E Sbjct: 62 GDGAATYKVGFRIVVFRPFVGEVIAAKFKESDSNGLRLTLGFFDDIYVPAPLMPKPNRCE 121 Query: 543 ADSVNKNQVSWIWEYQE--ENYAIYGVDEIRFRVNNISYPPIPIEADKESNRFAPMVITG 370 D N+ Q+ W+WEY E E++ I +I+FRV +ISYP +P E +++ FAPMV+TG Sbjct: 122 PDPYNRKQMIWVWEYGEPLEDFIIDDSCQIKFRVESISYPSVPTERAEDAKPFAPMVVTG 181 Query: 369 SLDADGLGPVSWW 331 ++D DGLGPVSWW Sbjct: 182 NMDEDGLGPVSWW 194 >ref|NP_172164.1| RNA polymerase Rpb7 N-terminal domain-containing protein [Arabidopsis thaliana] gi|7523702|gb|AAF63141.1|AC011001_11 hypothetical protein [Arabidopsis thaliana] gi|17529108|gb|AAL38764.1| putative RNA polymerase [Arabidopsis thaliana] gi|23296904|gb|AAN13199.1| putative RNA polymerase [Arabidopsis thaliana] gi|332189917|gb|AEE28038.1| RNA polymerase Rpb7 N-terminal domain-containing protein [Arabidopsis thaliana] Length = 204 Score = 261 bits (666), Expect = 3e-67 Identities = 121/193 (62%), Positives = 153/193 (79%), Gaps = 2/193 (1%) Frame = -3 Query: 903 FYLSEIEHTMRVPPHLLNLPLTEAIQGELERLFLDKVVANLGLVVSVYDIKSINGGFLFP 724 FYLSE+EH++RVPPHLLNLPL +AI+ L+ +FLDKV+A+LGL VS+YDIKS+ GGF+ P Sbjct: 2 FYLSELEHSLRVPPHLLNLPLEDAIKSVLQNVFLDKVLADLGLCVSIYDIKSVEGGFVLP 61 Query: 723 SDGASTYTVNFRLVVFRPFVGEVVTAKLLESTANGLRLSLGFFDDIYVPAHLMPNPSHFE 544 DGA+TY V R+VVFRPFVGEV+ AK ES ANGLRL+LGFFDDIYVPA LMP P+ E Sbjct: 62 GDGAATYKVGLRIVVFRPFVGEVIAAKFKESDANGLRLTLGFFDDIYVPAPLMPKPNRCE 121 Query: 543 ADSVNKNQVSWIWEYQE--ENYAIYGVDEIRFRVNNISYPPIPIEADKESNRFAPMVITG 370 D N+ Q+ W+WEY E E+Y + +I+FRV +ISYP +P E +++ FAPMV+TG Sbjct: 122 PDPYNRKQMIWVWEYGEPKEDYIVDDACQIKFRVESISYPSVPTERAEDAKPFAPMVVTG 181 Query: 369 SLDADGLGPVSWW 331 ++D DGLGPVSWW Sbjct: 182 NMDDDGLGPVSWW 194