BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00011752
         (921 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAF43947.1|AC012188_24 Contains similarity to DNA Pol III Gam...    68   3e-09
ref|NP_172898.2| AAA-type ATPase family protein [Arabidopsis tha...    68   3e-09
ref|XP_002892809.1| hypothetical protein ARALYDRAFT_888824 [Arab...    68   3e-09

>gb|AAF43947.1|AC012188_24 Contains similarity to DNA Pol III Gamma and Tau from Chlamydia
            trachomatis gb|AE001306.1 and contains an AAA (ATPase)
            PF|00004 domain [Arabidopsis thaliana]
          Length = 1071

 Score = 68.2 bits (165), Expect = 3e-09
 Identities = 47/138 (34%), Positives = 68/138 (49%), Gaps = 3/138 (2%)
 Frame = -2

Query: 425  SNMLDDVWIRCIGRCHSKTLRHLLCSDGKLVLISKVK---VSQIHLKXXXXXXXXXXXXX 255
            S  L+D+WI+C+ RCHSKTL+ LL + GKL+ IS+V+   V+ I                
Sbjct: 874  SEKLNDIWIKCVDRCHSKTLKQLLYAHGKLLSISEVEGILVAYIAFGEGEIKARAERFVS 933

Query: 254  XXXXXKNMKLRYHKSCQG*ASMILMLC*LNFLSISKSLSMLVDDSDEVNETNERKPVVPS 75
                   M LR +   +     I++L     L+  ++  + V  S      NE    +P 
Sbjct: 934  SITNSIEMVLRRNVEVR-----IILLSETELLNSKQTRQIAVTTSSYTESGNE----IPM 984

Query: 74   SRIESIIYEQRLKTAWLQ 21
             RIE+II EQRL+T WLQ
Sbjct: 985  KRIEAIIQEQRLETEWLQ 1002


>ref|NP_172898.2| AAA-type ATPase family protein [Arabidopsis thaliana]
            gi|332191046|gb|AEE29167.1| AAA-type ATPase family
            protein [Arabidopsis thaliana]
          Length = 1116

 Score = 68.2 bits (165), Expect = 3e-09
 Identities = 47/138 (34%), Positives = 68/138 (49%), Gaps = 3/138 (2%)
 Frame = -2

Query: 425  SNMLDDVWIRCIGRCHSKTLRHLLCSDGKLVLISKVK---VSQIHLKXXXXXXXXXXXXX 255
            S  L+D+WI+C+ RCHSKTL+ LL + GKL+ IS+V+   V+ I                
Sbjct: 867  SEKLNDIWIKCVDRCHSKTLKQLLYAHGKLLSISEVEGILVAYIAFGEGEIKARAERFVS 926

Query: 254  XXXXXKNMKLRYHKSCQG*ASMILMLC*LNFLSISKSLSMLVDDSDEVNETNERKPVVPS 75
                   M LR +   +     I++L     L+  ++  + V  S      NE    +P 
Sbjct: 927  SITNSIEMVLRRNVEVR-----IILLSETELLNSKQTRQIAVTTSSYTESGNE----IPM 977

Query: 74   SRIESIIYEQRLKTAWLQ 21
             RIE+II EQRL+T WLQ
Sbjct: 978  KRIEAIIQEQRLETEWLQ 995


>ref|XP_002892809.1| hypothetical protein ARALYDRAFT_888824 [Arabidopsis lyrata subsp.
            lyrata] gi|297338651|gb|EFH69068.1| hypothetical protein
            ARALYDRAFT_888824 [Arabidopsis lyrata subsp. lyrata]
          Length = 1130

 Score = 67.8 bits (164), Expect = 3e-09
 Identities = 47/138 (34%), Positives = 68/138 (49%), Gaps = 3/138 (2%)
 Frame = -2

Query: 425  SNMLDDVWIRCIGRCHSKTLRHLLCSDGKLVLISKVK---VSQIHLKXXXXXXXXXXXXX 255
            S  L+D+WI+C+ RCHSKTL+ LL + GKL+ IS+V+   V+ I                
Sbjct: 881  SEKLNDIWIKCVDRCHSKTLKQLLYAHGKLLSISEVEGILVAYIAFGEREIKARAERFVS 940

Query: 254  XXXXXKNMKLRYHKSCQG*ASMILMLC*LNFLSISKSLSMLVDDSDEVNETNERKPVVPS 75
                   M LR +   +     I++L     L+  ++    V  S +    NE    +P 
Sbjct: 941  SITNSIEMVLRRNVEVR-----IILLSETELLNSKQTRQTAVTTSSDNESGNE----IPM 991

Query: 74   SRIESIIYEQRLKTAWLQ 21
             RIE+II EQRL+T WLQ
Sbjct: 992  KRIEAIIQEQRLETEWLQ 1009