BLASTX nr result

ID: Cnidium21_contig00011733 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00011733
         (1518 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_173402.1| hypothetical protein NitaMp056 [Nicotiana tabac...   236   9e-60
ref|XP_004153710.1| PREDICTED: LOW QUALITY PROTEIN: NADH-ubiquin...   215   2e-53
ref|XP_003588292.1| NADH-ubiquinone oxidoreductase chain [Medica...   215   2e-53
ref|XP_003588285.1| NADH-ubiquinone oxidoreductase chain [Medica...   215   2e-53
ref|XP_004153322.1| PREDICTED: NADH-ubiquinone oxidoreductase ch...   213   8e-53

>ref|YP_173402.1| hypothetical protein NitaMp056 [Nicotiana tabacum]
            gi|56806565|dbj|BAD83466.1| hypothetical protein
            (mitochondrion) [Nicotiana tabacum]
          Length = 142

 Score =  236 bits (603), Expect = 9e-60
 Identities = 121/129 (93%), Positives = 122/129 (94%)
 Frame = -3

Query: 1516 ATCRETCTCGSGRGPRYTVLICVGSCNLSEIVMAQKQIWSGIPLFPVLVMFFISRLAETN 1337
            ATCRETCTCGSGRGPRYTVLICVGS N SEIVMAQKQIWSGIPLFPVLVMFFISRLAETN
Sbjct: 14   ATCRETCTCGSGRGPRYTVLICVGSRNSSEIVMAQKQIWSGIPLFPVLVMFFISRLAETN 73

Query: 1336 RAPFDLPEAEAESVAGYNVEYARDAILNSSLLAEANVPGFRRLILTKTRGGSLPT*KPSI 1157
            RAPFDLPEAEAESVAGYNVEYARDAILNSSLLAEANVPG R LILT+TRGGSLPT K SI
Sbjct: 74   RAPFDLPEAEAESVAGYNVEYARDAILNSSLLAEANVPGSRGLILTETRGGSLPTSKYSI 133

Query: 1156 LGKPKNVSA 1130
            LGKPK VSA
Sbjct: 134  LGKPKKVSA 142


>ref|XP_004153710.1| PREDICTED: LOW QUALITY PROTEIN: NADH-ubiquinone oxidoreductase chain
            1-like [Cucumis sativus]
          Length = 166

 Score =  215 bits (548), Expect = 2e-53
 Identities = 113/132 (85%), Positives = 116/132 (87%)
 Frame = -3

Query: 1516 ATCRETCTCGSGRGPRYTVLICVGSCNLSEIVMAQKQIWSGIPLFPVLVMFFISRLAETN 1337
            ATCRETCTCGSGRGPRYTVLICVG  N SEIVMAQKQIWSGIPLFPVLVMFFISRLAETN
Sbjct: 15   ATCRETCTCGSGRGPRYTVLICVGPRNSSEIVMAQKQIWSGIPLFPVLVMFFISRLAETN 74

Query: 1336 RAPFDLPEAEAESVAGYNVEYARDAILNSSLLAEANVPGFRRLILTKTRGGSLPT*KPSI 1157
            RAPFDLPEAEAESVAGYNVEYARDAILNS LLAEANVPG R LILT+TRGGSLP  +   
Sbjct: 75   RAPFDLPEAEAESVAGYNVEYARDAILNSPLLAEANVPGSRGLILTETRGGSLPIXR--- 131

Query: 1156 LGKPKNVSA*RE 1121
              +PK VSA  E
Sbjct: 132  -FQPKKVSAGNE 142


>ref|XP_003588292.1| NADH-ubiquinone oxidoreductase chain [Medicago truncatula]
            gi|355477340|gb|AES58543.1| NADH-ubiquinone
            oxidoreductase chain [Medicago truncatula]
          Length = 335

 Score =  215 bits (548), Expect = 2e-53
 Identities = 108/115 (93%), Positives = 109/115 (94%)
 Frame = -3

Query: 1516 ATCRETCTCGSGRGPRYTVLICVGSCNLSEIVMAQKQIWSGIPLFPVLVMFFISRLAETN 1337
            ATCRETCTCGSGRGPRYTVLICVG  N SEIVMAQKQIWSGIPLFPVLVMFFISRLAETN
Sbjct: 221  ATCRETCTCGSGRGPRYTVLICVGPRNSSEIVMAQKQIWSGIPLFPVLVMFFISRLAETN 280

Query: 1336 RAPFDLPEAEAESVAGYNVEYARDAILNSSLLAEANVPGFRRLILTKTRGGSLPT 1172
            RAPFDLPEAEAESVAGYNVEYARDAILNS LLAEANVPG R LILT+TRGGSLPT
Sbjct: 281  RAPFDLPEAEAESVAGYNVEYARDAILNSPLLAEANVPGSRGLILTETRGGSLPT 335


>ref|XP_003588285.1| NADH-ubiquinone oxidoreductase chain [Medicago truncatula]
            gi|355477333|gb|AES58536.1| NADH-ubiquinone
            oxidoreductase chain [Medicago truncatula]
          Length = 128

 Score =  215 bits (548), Expect = 2e-53
 Identities = 108/115 (93%), Positives = 109/115 (94%)
 Frame = -3

Query: 1516 ATCRETCTCGSGRGPRYTVLICVGSCNLSEIVMAQKQIWSGIPLFPVLVMFFISRLAETN 1337
            ATCRETCTCGSGRGPRYTVLICVG  N SEIVMAQKQIWSGIPLFPVLVMFFISRLAETN
Sbjct: 14   ATCRETCTCGSGRGPRYTVLICVGPRNSSEIVMAQKQIWSGIPLFPVLVMFFISRLAETN 73

Query: 1336 RAPFDLPEAEAESVAGYNVEYARDAILNSSLLAEANVPGFRRLILTKTRGGSLPT 1172
            RAPFDLPEAEAESVAGYNVEYARDAILNS LLAEANVPG R LILT+TRGGSLPT
Sbjct: 74   RAPFDLPEAEAESVAGYNVEYARDAILNSPLLAEANVPGSRGLILTETRGGSLPT 128


>ref|XP_004153322.1| PREDICTED: NADH-ubiquinone oxidoreductase chain 1-like, partial
            [Cucumis sativus] gi|449472154|ref|XP_004153510.1|
            PREDICTED: NADH-ubiquinone oxidoreductase chain 1-like,
            partial [Cucumis sativus]
            gi|449473509|ref|XP_004153902.1| PREDICTED:
            NADH-ubiquinone oxidoreductase chain 1-like, partial
            [Cucumis sativus] gi|449529808|ref|XP_004171890.1|
            PREDICTED: NADH-ubiquinone oxidoreductase chain 1-like,
            partial [Cucumis sativus]
          Length = 135

 Score =  213 bits (543), Expect = 8e-53
 Identities = 107/114 (93%), Positives = 108/114 (94%)
 Frame = -3

Query: 1516 ATCRETCTCGSGRGPRYTVLICVGSCNLSEIVMAQKQIWSGIPLFPVLVMFFISRLAETN 1337
            ATCRETCTCGSGRGPRYTVLICVG  N SEIVMAQKQIWSGIPLFPVLVMFFISRLAETN
Sbjct: 15   ATCRETCTCGSGRGPRYTVLICVGPRNSSEIVMAQKQIWSGIPLFPVLVMFFISRLAETN 74

Query: 1336 RAPFDLPEAEAESVAGYNVEYARDAILNSSLLAEANVPGFRRLILTKTRGGSLP 1175
            RAPFDLPEAEAESVAGYNVEYARDAILNS LLAEANVPG R LILT+TRGGSLP
Sbjct: 75   RAPFDLPEAEAESVAGYNVEYARDAILNSPLLAEANVPGSRGLILTETRGGSLP 128


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