BLASTX nr result

ID: Cnidium21_contig00011705 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00011705
         (1089 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002314739.1| predicted protein [Populus trichocarpa] gi|2...   264   3e-68
ref|XP_002312505.1| predicted protein [Populus trichocarpa] gi|2...   248   2e-63
ref|XP_004140447.1| PREDICTED: zinc finger CCCH domain-containin...   205   1e-50
ref|XP_003532678.1| PREDICTED: zinc finger CCCH domain-containin...   184   3e-44
ref|XP_002876801.1| hypothetical protein ARALYDRAFT_484140 [Arab...   147   6e-33

>ref|XP_002314739.1| predicted protein [Populus trichocarpa] gi|222863779|gb|EEF00910.1|
            predicted protein [Populus trichocarpa]
          Length = 735

 Score =  264 bits (675), Expect = 3e-68
 Identities = 156/373 (41%), Positives = 209/373 (56%), Gaps = 11/373 (2%)
 Frame = +1

Query: 1    KGDMCPFMHAPYSLNNKATQSGGATPVSESQPNKKTFGGLGKHTQVQKFSQGNAPKSAIL 180
            KGD C F H P   +N+ +Q+   TP +E+ P +K FGGL K TQ QK  Q N  K+   
Sbjct: 132  KGDRCAFSHGPNHASNRVSQTMAFTPGTEAHPPEKAFGGLQKCTQEQKLPQVNLSKAVEP 191

Query: 181  PPREKSADAVKKSPLRNENSISRNVSSAAGLDDDLPQYRPGNVHXXXXXXXXXXXXXXHQ 360
            P   K     + +  RN   ++RNV      DD++P+Y+  N+               H 
Sbjct: 192  PTVAKPVSKAEIASARNSAGVARNVVPPKSTDDEVPRYKSSNL-PPEVNGNSSRSNQLHL 250

Query: 361  VHIVEDQSVSNVKDADEVSRELSPGFDVLVDDELMDSEYYPDED--GIYTGHDGMNLDAT 534
              + +D    N KDADE  RE SPGFDVLVDDEL DS+YY  ED  G   GH+G NL++ 
Sbjct: 251  SRVADDHVNHNGKDADEYLRESSPGFDVLVDDELRDSDYYHGEDQFGRTIGHEGRNLNSV 310

Query: 535  NEYGIRRAAGYSPVADADRDMYHDERNYDSFERLQGHYXXXXXXXXXXXXXXXXAYLERR 714
            +EYG    A Y  + D D++ Y D R YD +E +QG +                A+LERR
Sbjct: 311  DEYGRGHPADYGSLPD-DQERYGDPRGYDPYEHMQGQHAWEQHRASSERMLVAPAHLERR 369

Query: 715  RYPRADSPGRINGSDLRHHLSKQKRNTGLRSIISRDRTREGYADDRSYRAPGR---DHLP 885
             Y +ADSP  I GSDLR+ LSKQ+R  GLRS++S D     + ++R Y+   R    HL 
Sbjct: 370  GYSKADSPEHIEGSDLRYLLSKQRRVNGLRSVVSNDFVPGNHVEERGYQGSSRRDSHHLL 429

Query: 886  THDNFVSSRLRGRIKIPGRSVSPIPPL-SEKEIDRARHRSRLSSERPL-----GRLKDRI 1047
            +H++ +SSRLRGRIK+PG S +    L +E+EIDR R+R RLS  R L     GR +DR+
Sbjct: 430  SHESPISSRLRGRIKLPGGSPNEGGDLHAEREIDRGRNRGRLSPVRSLISSQQGRFRDRM 489

Query: 1048 KGRVQEDFINERN 1086
            K RV+ED+   RN
Sbjct: 490  KARVEEDYNEGRN 502


>ref|XP_002312505.1| predicted protein [Populus trichocarpa] gi|222852325|gb|EEE89872.1|
            predicted protein [Populus trichocarpa]
          Length = 721

 Score =  248 bits (633), Expect = 2e-63
 Identities = 148/373 (39%), Positives = 202/373 (54%), Gaps = 11/373 (2%)
 Frame = +1

Query: 1    KGDMCPFMHAPYSLNNKATQSGGATPVSESQPNKKTFGGLGKHTQVQKFSQGNAPKSAIL 180
            KGD C F H P    NK +Q    TP +E+ P KK FGGL K  Q  K  Q    K+   
Sbjct: 117  KGDKCAFSHGPNLAGNKVSQPMAPTPGAEALPPKKAFGGLQKCAQEHKIPQTKISKAVEA 176

Query: 181  PPREKSADAVKKSPLRNENSISRNVSSAAGLDDDLPQYRPGNVHXXXXXXXXXXXXXXHQ 360
            P   K     +    RN   + R+      +D ++P+Y+  N+               HQ
Sbjct: 177  PSVAKPVSKAEIVHARNIAGVVRSAVPPTSMDGEIPRYKAANL-PLMVNGNLSRSSRLHQ 235

Query: 361  VHIVEDQSVSNVKDADEVSRELSPGFDVLVDDELMDSEYYPDED--GIYTGHDGMNLDAT 534
            + + +D  + N KDADE  RE SPGFDVLVD+EL DS+YY  E+  G  TG++G NL++ 
Sbjct: 236  LQVADDHVIQNGKDADEYLRESSPGFDVLVDNELRDSDYYHGEEQLGRTTGNEGRNLNSV 295

Query: 535  NEYGIRRAAGYSPVADADRDMYHDERNYDSFERLQGHYXXXXXXXXXXXXXXXXAYLERR 714
            +EY    +A Y  + D D++MY D R YDS+E   G +                   ERR
Sbjct: 296  DEYDTGHSADYGLLHD-DQEMYRDPRGYDSYELTPGQHAWEQHRASSERMLMAPVLPERR 354

Query: 715  RYPRADSPGRINGSDLRHHLSKQKRNTGLRSIISRDRTREGYADDRSYRAPGR---DHLP 885
             Y +ADSP     SDLR+ LSKQ+R  GLRS++S D   E + ++R YR   R     LP
Sbjct: 355  GYAKADSPEHTEESDLRYRLSKQRRVNGLRSVVSNDFVPENHVEERGYRGSSRRDSHQLP 414

Query: 886  THDNFVSSRLRGRIKIPGRSVSPIPPL-SEKEIDRARHRSRLSSER-----PLGRLKDRI 1047
            +H++ +SSRLRGRIK+PGRS +    + +E+EIDR R+R RLS  R       GRL+DR+
Sbjct: 415  SHESSISSRLRGRIKLPGRSPNNGGDVRAEREIDRGRNRGRLSPVRSPVTSQQGRLRDRM 474

Query: 1048 KGRVQEDFINERN 1086
            K RV+ED+   R+
Sbjct: 475  KARVEEDYNEGRS 487


>ref|XP_004140447.1| PREDICTED: zinc finger CCCH domain-containing protein 17-like
            [Cucumis sativus] gi|449487921|ref|XP_004157867.1|
            PREDICTED: zinc finger CCCH domain-containing protein
            17-like [Cucumis sativus]
          Length = 721

 Score =  205 bits (522), Expect = 1e-50
 Identities = 135/375 (36%), Positives = 188/375 (50%), Gaps = 14/375 (3%)
 Frame = +1

Query: 1    KGDMCPFMHAPYSLN-NKATQSGGATPVSESQPNKKTFGGLGKHTQVQKFSQGNAPKS-- 171
            KGD C F+H P S+  NK  Q G      E    KK  GG  + +Q QK  Q N  KS  
Sbjct: 132  KGDRCAFLHGPPSVQTNKVPQMGANAQAGEPPSVKKVSGGTQRSSQEQKIPQANFLKSIS 191

Query: 172  -AILPPREKSADAVKKSPLRNENSISRNVSSAAGLDDDLPQYRPGNVHXXXXXXXXXXXX 348
             + +    K      K    NE SI       A + D   +Y+  N              
Sbjct: 192  GSSVKIATKDETVPSKIGKLNEKSIP-----PAEMADGGSRYKTTNALPTINECSLSRAN 246

Query: 349  XXHQVHIVEDQSVSNVKDADEVSRELSPGFDVLVDDELMDSEYYPDED--GIYTGHDGMN 522
               Q H+++D  + N KDADE  +E SPGFDVLVDDEL  S YY  E+  G   GH+G N
Sbjct: 247  RLQQSHVIDDHGLQNGKDADEFLKESSPGFDVLVDDELRGSGYYGSEEQYGRSRGHEGGN 306

Query: 523  LDATNEYGIRRAAGYSPVADADRDMYHDERNYDSFERLQGHYXXXXXXXXXXXXXXXXAY 702
            + + N+Y I  +A Y  + D D D+Y+D  +YD   R  G Y                A 
Sbjct: 307  MTSMNDYDINHSADYKMMGDVDHDVYNDVTDYDYESRQGGQYGWDHRRTSSDKLSLSSAQ 366

Query: 703  LERRRYPRADSPGRINGSDLRHHLSKQKRNTGLRSIISRDRTREGYADDRSYRAPGRDHL 882
            +ERR +P+++SP  +   DLRH L+KQ+R  GLRS+I+ +       ++R+YR+  RD  
Sbjct: 367  MERRIFPKSNSPEHVQNVDLRHRLNKQRRGNGLRSVINNENA-ASRPEERNYRSSRRDSH 425

Query: 883  PTHDNFVSSRLRGRIKIPGRSVSPIPPLS---EKEIDRARHRSRLSSERP-----LGRLK 1038
             + ++ VS+RLRGRIK+P R  SP+       E++++R R   R S  R       G  +
Sbjct: 426  SSQESTVSNRLRGRIKLP-RIPSPVRSSDIRPERDLNRGRPWGRSSPGRSQSLSNQGSNR 484

Query: 1039 DRIKGRVQEDFINER 1083
            D IKGR++ED+ NER
Sbjct: 485  DEIKGRLEEDYNNER 499


>ref|XP_003532678.1| PREDICTED: zinc finger CCCH domain-containing protein 17-like
            [Glycine max]
          Length = 710

 Score =  184 bits (468), Expect = 3e-44
 Identities = 130/376 (34%), Positives = 190/376 (50%), Gaps = 20/376 (5%)
 Frame = +1

Query: 1    KGDMCPFMHAPY----SLNNKATQSGGATPVSESQPN-KKTFGGLGKHTQVQKFSQGNAP 165
            KGD C F+H P     S  NK       T      P+ KK F    K+TQ +K SQGN  
Sbjct: 132  KGDRCAFLHGPPAPTPSTGNKVAAQVPVTIQGAENPSFKKPFVSNEKYTQERKTSQGNFA 191

Query: 166  KSAILPPREKSADAVKKSPLRNENSISRNVSS-AAGLDDDLPQYRPGNVHXXXXXXXXXX 342
            KS   P   K +  ++ +P RN   + + V   +A  +++  +++  +            
Sbjct: 192  KSGGAP-EAKPSPKIETAPQRNMFELEKKVPPPSAEFNNEASRFKTISP-PVTNGPIVAR 249

Query: 343  XXXXHQVHIVEDQSVSNVKDADEVSRELSPGFDVLVDDELMDSEYYPDED--GIYTGHDG 516
                HQ  + +D +  + KD+DE  RE SPGFDVLV DEL +S+YY  ED  G   G D 
Sbjct: 250  SNRLHQARVPDDHNFQSGKDSDEFLRESSPGFDVLVADELRNSDYYHGEDEFGKARGQDE 309

Query: 517  MNLDATNEYGIRRAAGYSPVADADRDMYHDERNYDSFERLQGHYXXXXXXXXXXXXXXXX 696
             NLD+ NEY +  +  YS  AD DR+ +   + Y+S++ +Q  Y                
Sbjct: 310  RNLDSLNEYDLGHSGDYSLAADIDRERFRGPQGYESYDHMQEPYAWEQHRKPS------- 362

Query: 697  AYLERRRYPRADSPGRINGSDLRHHLSKQKRNTGLRSIISRDRTREGYADDRSYRAPGRD 876
            ++L RR   R+DSP     SDLRHHLSK+++  GL+S+IS D    G+ +++S R+  R 
Sbjct: 363  SHLGRRTRRRSDSPENAEVSDLRHHLSKRRKGNGLKSVISHDHAHGGHGEEQSRRSFSRK 422

Query: 877  ---HLPTHDNFVSSRLRGRIKIPGRSVSPIPPLSEKEIDRARHRSRLSSER--------- 1020
                LP +++ + +R RGRIK+P       P   E+E D  R R+RL S R         
Sbjct: 423  DSLELPLNESSLGNRFRGRIKLPENGDGDHP---ERE-DGGRFRNRLPSGRLPATHHLSP 478

Query: 1021 PLGRLKDRIKGRVQED 1068
              GR+ DRI+GR+Q+D
Sbjct: 479  REGRVHDRIRGRLQDD 494


>ref|XP_002876801.1| hypothetical protein ARALYDRAFT_484140 [Arabidopsis lyrata subsp.
            lyrata] gi|297322639|gb|EFH53060.1| hypothetical protein
            ARALYDRAFT_484140 [Arabidopsis lyrata subsp. lyrata]
          Length = 676

 Score =  147 bits (370), Expect = 6e-33
 Identities = 117/356 (32%), Positives = 169/356 (47%)
 Frame = +1

Query: 1    KGDMCPFMHAPYSLNNKATQSGGATPVSESQPNKKTFGGLGKHTQVQKFSQGNAPKSAIL 180
            KGDMC F+H P     K      A P ++ Q +KK    +  +T  +KF+  N  K+   
Sbjct: 130  KGDMCSFLHTPNPAAYKKLLPVEAKPAADPQFSKKP---IENNTGEKKFADANLSKAVKA 186

Query: 181  PPREKSADAVKKSPLRNENSISRNVSSAAGLDDDLPQYRPGNVHXXXXXXXXXXXXXXHQ 360
                 +A  V  + LR+   +   V    G D   P  +                   H+
Sbjct: 187  HVDISAAPRVTSAGLRDSRRVEGYVPEHMGYD---PVVQKKGTGVPSFTEGGHSTQLLHK 243

Query: 361  VHIVEDQSVSNVKDADEVSRELSPGFDVLVDDELMDSEYYPDEDGIYTGHDGMNLDATNE 540
                ++ S  N KDAD+V RE SPGFDVLVD+E  DSEYY  ED  Y        ++ NE
Sbjct: 244  YGSDDNNSFHNGKDADDVLRESSPGFDVLVDNEARDSEYYRVEDR-YGRRSQEGGNSVNE 302

Query: 541  YGIRRAAGYSPVADADRDMYHDERNYDSFERLQGHYXXXXXXXXXXXXXXXXAYLERRRY 720
            Y       +S +AD D   +HD+R +D +++ +  Y                 + ERR Y
Sbjct: 303  YD----PDFSAIAD-DEKAFHDQR-FDPYDQREDRYAWGNRRVSSERGD----HSERRVY 352

Query: 721  PRADSPGRINGSDLRHHLSKQKRNTGLRSIISRDRTREGYADDRSYRAPGRDHLPTHDNF 900
               +    I  SDLR+ L+KQ++  G+RS+ S D      + +R YR   RD L   ++ 
Sbjct: 353  AEDERSENILASDLRYRLAKQRKVNGVRSVGSHDYGAPDSSVERGYRDSRRDTL-RENSI 411

Query: 901  VSSRLRGRIKIPGRSVSPIPPLSEKEIDRARHRSRLSSERPLGRLKDRIKGRVQED 1068
             SSRL+GRIK+  RS        ++  +R R RS LSS+   GRL+DRIKGR++E+
Sbjct: 412  SSSRLQGRIKLRERSNGDEGHHFDRRNERGRDRSELSSQ---GRLRDRIKGRLEEN 464


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