BLASTX nr result
ID: Cnidium21_contig00011692
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cnidium21_contig00011692 (1321 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002276935.1| PREDICTED: pentatricopeptide repeat-containi... 81 7e-13 emb|CBI26127.3| unnamed protein product [Vitis vinifera] 81 7e-13 ref|XP_002314475.1| predicted protein [Populus trichocarpa] gi|2... 80 1e-12 ref|XP_003516564.1| PREDICTED: pentatricopeptide repeat-containi... 52 9e-11 ref|XP_002516850.1| pentatricopeptide repeat-containing protein,... 73 1e-10 >ref|XP_002276935.1| PREDICTED: pentatricopeptide repeat-containing protein At2g36980, mitochondrial-like [Vitis vinifera] Length = 623 Score = 80.9 bits (198), Expect = 7e-13 Identities = 43/89 (48%), Positives = 57/89 (64%), Gaps = 8/89 (8%) Frame = -1 Query: 685 LLNIVSWNAIIDAYMKIRDTQKAFYAFEEVPDKSIV----RTSGYARNGRGVEAVRFFRD 518 +L VSWNA+IDA+MKI DT +AF F+ P+K++V +GYARNG G +A+ FF Sbjct: 266 ILTQVSWNAMIDAHMKIGDTHEAFLVFQLAPEKNVVSWTSMITGYARNGHGEQALSFFVK 325 Query: 517 MIRNGLQPISFSLG----ACYLLATFGQG 443 M+ N +QP F+ G AC LAT G G Sbjct: 326 MMENHIQPDDFTFGAVLHACSSLATLGHG 354 >emb|CBI26127.3| unnamed protein product [Vitis vinifera] Length = 603 Score = 80.9 bits (198), Expect = 7e-13 Identities = 43/89 (48%), Positives = 57/89 (64%), Gaps = 8/89 (8%) Frame = -1 Query: 685 LLNIVSWNAIIDAYMKIRDTQKAFYAFEEVPDKSIV----RTSGYARNGRGVEAVRFFRD 518 +L VSWNA+IDA+MKI DT +AF F+ P+K++V +GYARNG G +A+ FF Sbjct: 246 ILTQVSWNAMIDAHMKIGDTHEAFLVFQLAPEKNVVSWTSMITGYARNGHGEQALSFFVK 305 Query: 517 MIRNGLQPISFSLG----ACYLLATFGQG 443 M+ N +QP F+ G AC LAT G G Sbjct: 306 MMENHIQPDDFTFGAVLHACSSLATLGHG 334 >ref|XP_002314475.1| predicted protein [Populus trichocarpa] gi|222863515|gb|EEF00646.1| predicted protein [Populus trichocarpa] Length = 492 Score = 80.1 bits (196), Expect = 1e-12 Identities = 45/88 (51%), Positives = 55/88 (62%), Gaps = 8/88 (9%) Frame = -1 Query: 682 LNIVSWNAIIDAYMKIRDTQKAFYAFEEVPDKSIV----RTSGYARNGRGVEAVRFFRDM 515 L VSWNAIID +MK DT +AF +F+ +PDK++V +GYARNG G EA+ FF M Sbjct: 136 LTQVSWNAIIDVFMKAGDTSEAFLSFQRMPDKNVVSWTSMITGYARNGYGEEALDFFVGM 195 Query: 514 IRNGLQPISFSLG----ACYLLATFGQG 443 IRN L P F+ G AC LA G G Sbjct: 196 IRNCLLPDDFTFGAVLHACSSLAILGHG 223 Score = 48.9 bits (115), Expect(2) = 1e-06 Identities = 21/29 (72%), Positives = 24/29 (82%) Frame = -2 Query: 276 MLASGVNPDKVTFTGLLMACSH*GLIDKG 190 M+ASG+ PDKVTF GL + CSH GLIDKG Sbjct: 296 MVASGIKPDKVTFIGLFLTCSHSGLIDKG 324 Score = 30.8 bits (68), Expect(2) = 1e-06 Identities = 12/25 (48%), Positives = 22/25 (88%) Frame = -3 Query: 365 KDVVSWNTILLAYGMNGWASKALQV 291 KD+VS+N++L A+G++G ++ALQ+ Sbjct: 268 KDLVSFNSMLFAFGLHGKGTQALQL 292 >ref|XP_003516564.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520-like [Glycine max] Length = 516 Score = 52.0 bits (123), Expect(2) = 9e-11 Identities = 29/87 (33%), Positives = 48/87 (55%), Gaps = 8/87 (9%) Frame = -1 Query: 679 NIVSWNAIIDAYMKIRDTQKAFYAFEEVPDKSIVRTS----GYARNGRGVEAVRFFRDMI 512 +IVSWN +ID Y+K + A+ F+ +P+K+++ + G+ R G EA+ + M+ Sbjct: 175 DIVSWNIMIDGYIKFGNLDMAYKIFQAMPEKNVISWTTMIVGFVRIGMHKEALSLLQQML 234 Query: 511 RNGLQP----ISFSLGACYLLATFGQG 443 G++P +S SL AC L QG Sbjct: 235 VAGIKPDSITLSCSLSACAGLGALEQG 261 Score = 42.0 bits (97), Expect(2) = 9e-11 Identities = 21/64 (32%), Positives = 32/64 (50%), Gaps = 6/64 (9%) Frame = -2 Query: 357 SLLEYNFACVWNEWMGXXXXXXXXSR------RMLASGVNPDKVTFTGLLMACSH*GLID 196 S LE C W +G +M +G+NP+ +TFT +L ACSH GL + Sbjct: 301 SKLEKKCVCAWTAIIGGLAIHGKGREALDWFTQMQKAGINPNSITFTAILTACSHAGLTE 360 Query: 195 KGRA 184 +G++ Sbjct: 361 EGKS 364 >ref|XP_002516850.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] gi|223543938|gb|EEF45464.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] Length = 623 Score = 73.2 bits (178), Expect = 1e-10 Identities = 42/88 (47%), Positives = 52/88 (59%), Gaps = 8/88 (9%) Frame = -1 Query: 682 LNIVSWNAIIDAYMKIRDTQKAFYAFEEVPDKSIV----RTSGYARNGRGVEAVRFFRDM 515 L VSWNAIIDAYMK+ +A+ F+ +P+K+IV +GYARNG G EA+RFF M Sbjct: 267 LTQVSWNAIIDAYMKVGYVNEAYLMFQSLPEKNIVSWTSMITGYARNGYGEEALRFFVAM 326 Query: 514 IRNGLQPISFSLG----ACYLLATFGQG 443 N P F+ G AC LA G G Sbjct: 327 ASNCFLPDDFTFGAVLHACSSLAVLGHG 354 Score = 45.1 bits (105), Expect(2) = 3e-06 Identities = 19/30 (63%), Positives = 23/30 (76%) Frame = -2 Query: 276 MLASGVNPDKVTFTGLLMACSH*GLIDKGR 187 M+ G PDK+TF GLLM CSH GLI++GR Sbjct: 427 MMTCGTKPDKMTFIGLLMTCSHSGLIEEGR 456 Score = 33.5 bits (75), Expect(2) = 3e-06 Identities = 14/25 (56%), Positives = 22/25 (88%) Frame = -3 Query: 365 KDVVSWNTILLAYGMNGWASKALQV 291 KD+VS+N +L A+G++G AS+ALQ+ Sbjct: 399 KDLVSFNALLFAFGLHGKASEALQL 423