BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00011692
         (1321 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276935.1| PREDICTED: pentatricopeptide repeat-containi...    81   7e-13
emb|CBI26127.3| unnamed protein product [Vitis vinifera]               81   7e-13
ref|XP_002314475.1| predicted protein [Populus trichocarpa] gi|2...    80   1e-12
ref|XP_003516564.1| PREDICTED: pentatricopeptide repeat-containi...    52   9e-11
ref|XP_002516850.1| pentatricopeptide repeat-containing protein,...    73   1e-10

>ref|XP_002276935.1| PREDICTED: pentatricopeptide repeat-containing protein At2g36980,
           mitochondrial-like [Vitis vinifera]
          Length = 623

 Score = 80.9 bits (198), Expect = 7e-13
 Identities = 43/89 (48%), Positives = 57/89 (64%), Gaps = 8/89 (8%)
 Frame = -1

Query: 685 LLNIVSWNAIIDAYMKIRDTQKAFYAFEEVPDKSIV----RTSGYARNGRGVEAVRFFRD 518
           +L  VSWNA+IDA+MKI DT +AF  F+  P+K++V      +GYARNG G +A+ FF  
Sbjct: 266 ILTQVSWNAMIDAHMKIGDTHEAFLVFQLAPEKNVVSWTSMITGYARNGHGEQALSFFVK 325

Query: 517 MIRNGLQPISFSLG----ACYLLATFGQG 443
           M+ N +QP  F+ G    AC  LAT G G
Sbjct: 326 MMENHIQPDDFTFGAVLHACSSLATLGHG 354


>emb|CBI26127.3| unnamed protein product [Vitis vinifera]
          Length = 603

 Score = 80.9 bits (198), Expect = 7e-13
 Identities = 43/89 (48%), Positives = 57/89 (64%), Gaps = 8/89 (8%)
 Frame = -1

Query: 685 LLNIVSWNAIIDAYMKIRDTQKAFYAFEEVPDKSIV----RTSGYARNGRGVEAVRFFRD 518
           +L  VSWNA+IDA+MKI DT +AF  F+  P+K++V      +GYARNG G +A+ FF  
Sbjct: 246 ILTQVSWNAMIDAHMKIGDTHEAFLVFQLAPEKNVVSWTSMITGYARNGHGEQALSFFVK 305

Query: 517 MIRNGLQPISFSLG----ACYLLATFGQG 443
           M+ N +QP  F+ G    AC  LAT G G
Sbjct: 306 MMENHIQPDDFTFGAVLHACSSLATLGHG 334


>ref|XP_002314475.1| predicted protein [Populus trichocarpa] gi|222863515|gb|EEF00646.1|
           predicted protein [Populus trichocarpa]
          Length = 492

 Score = 80.1 bits (196), Expect = 1e-12
 Identities = 45/88 (51%), Positives = 55/88 (62%), Gaps = 8/88 (9%)
 Frame = -1

Query: 682 LNIVSWNAIIDAYMKIRDTQKAFYAFEEVPDKSIV----RTSGYARNGRGVEAVRFFRDM 515
           L  VSWNAIID +MK  DT +AF +F+ +PDK++V      +GYARNG G EA+ FF  M
Sbjct: 136 LTQVSWNAIIDVFMKAGDTSEAFLSFQRMPDKNVVSWTSMITGYARNGYGEEALDFFVGM 195

Query: 514 IRNGLQPISFSLG----ACYLLATFGQG 443
           IRN L P  F+ G    AC  LA  G G
Sbjct: 196 IRNCLLPDDFTFGAVLHACSSLAILGHG 223



 Score = 48.9 bits (115), Expect(2) = 1e-06
 Identities = 21/29 (72%), Positives = 24/29 (82%)
 Frame = -2

Query: 276 MLASGVNPDKVTFTGLLMACSH*GLIDKG 190
           M+ASG+ PDKVTF GL + CSH GLIDKG
Sbjct: 296 MVASGIKPDKVTFIGLFLTCSHSGLIDKG 324



 Score = 30.8 bits (68), Expect(2) = 1e-06
 Identities = 12/25 (48%), Positives = 22/25 (88%)
 Frame = -3

Query: 365 KDVVSWNTILLAYGMNGWASKALQV 291
           KD+VS+N++L A+G++G  ++ALQ+
Sbjct: 268 KDLVSFNSMLFAFGLHGKGTQALQL 292


>ref|XP_003516564.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Glycine max]
          Length = 516

 Score = 52.0 bits (123), Expect(2) = 9e-11
 Identities = 29/87 (33%), Positives = 48/87 (55%), Gaps = 8/87 (9%)
 Frame = -1

Query: 679 NIVSWNAIIDAYMKIRDTQKAFYAFEEVPDKSIVRTS----GYARNGRGVEAVRFFRDMI 512
           +IVSWN +ID Y+K  +   A+  F+ +P+K+++  +    G+ R G   EA+   + M+
Sbjct: 175 DIVSWNIMIDGYIKFGNLDMAYKIFQAMPEKNVISWTTMIVGFVRIGMHKEALSLLQQML 234

Query: 511 RNGLQP----ISFSLGACYLLATFGQG 443
             G++P    +S SL AC  L    QG
Sbjct: 235 VAGIKPDSITLSCSLSACAGLGALEQG 261



 Score = 42.0 bits (97), Expect(2) = 9e-11
 Identities = 21/64 (32%), Positives = 32/64 (50%), Gaps = 6/64 (9%)
 Frame = -2

Query: 357 SLLEYNFACVWNEWMGXXXXXXXXSR------RMLASGVNPDKVTFTGLLMACSH*GLID 196
           S LE    C W   +G                +M  +G+NP+ +TFT +L ACSH GL +
Sbjct: 301 SKLEKKCVCAWTAIIGGLAIHGKGREALDWFTQMQKAGINPNSITFTAILTACSHAGLTE 360

Query: 195 KGRA 184
           +G++
Sbjct: 361 EGKS 364


>ref|XP_002516850.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223543938|gb|EEF45464.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 623

 Score = 73.2 bits (178), Expect = 1e-10
 Identities = 42/88 (47%), Positives = 52/88 (59%), Gaps = 8/88 (9%)
 Frame = -1

Query: 682 LNIVSWNAIIDAYMKIRDTQKAFYAFEEVPDKSIV----RTSGYARNGRGVEAVRFFRDM 515
           L  VSWNAIIDAYMK+    +A+  F+ +P+K+IV      +GYARNG G EA+RFF  M
Sbjct: 267 LTQVSWNAIIDAYMKVGYVNEAYLMFQSLPEKNIVSWTSMITGYARNGYGEEALRFFVAM 326

Query: 514 IRNGLQPISFSLG----ACYLLATFGQG 443
             N   P  F+ G    AC  LA  G G
Sbjct: 327 ASNCFLPDDFTFGAVLHACSSLAVLGHG 354



 Score = 45.1 bits (105), Expect(2) = 3e-06
 Identities = 19/30 (63%), Positives = 23/30 (76%)
 Frame = -2

Query: 276 MLASGVNPDKVTFTGLLMACSH*GLIDKGR 187
           M+  G  PDK+TF GLLM CSH GLI++GR
Sbjct: 427 MMTCGTKPDKMTFIGLLMTCSHSGLIEEGR 456



 Score = 33.5 bits (75), Expect(2) = 3e-06
 Identities = 14/25 (56%), Positives = 22/25 (88%)
 Frame = -3

Query: 365 KDVVSWNTILLAYGMNGWASKALQV 291
           KD+VS+N +L A+G++G AS+ALQ+
Sbjct: 399 KDLVSFNALLFAFGLHGKASEALQL 423