BLASTX nr result
ID: Cnidium21_contig00011686
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cnidium21_contig00011686 (943 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002270280.1| PREDICTED: probable ribosome-binding factor ... 263 4e-68 ref|XP_003631582.1| PREDICTED: probable ribosome-binding factor ... 253 5e-65 ref|XP_002513014.1| Ribosome-binding factor A, putative [Ricinus... 251 1e-64 ref|XP_004151338.1| PREDICTED: probable ribosome-binding factor ... 245 1e-62 ref|XP_002306146.1| predicted protein [Populus trichocarpa] gi|2... 244 2e-62 >ref|XP_002270280.1| PREDICTED: probable ribosome-binding factor A, chloroplastic isoform 1 [Vitis vinifera] Length = 223 Score = 263 bits (672), Expect = 4e-68 Identities = 137/170 (80%), Positives = 153/170 (90%), Gaps = 2/170 (1%) Frame = +1 Query: 160 IKCMANQRRVKMVAKQIRRELSAMLLSDNVLQFAVLPEAALGADRYLSCLTTISDVEVSS 339 ++CMANQRRVKMVAKQIRRELS MLL+D VLQFAVLPEAALGADRYLS LTTISDVEVS+ Sbjct: 55 VRCMANQRRVKMVAKQIRRELSDMLLTDKVLQFAVLPEAALGADRYLSSLTTISDVEVSA 114 Query: 340 DLQVAKVYVSVFGDERGKDVAISGLKSKAKYVRSELGRRMKLRLTPEIRFIEDESIERGS 519 DLQV KVYVSVFGDE+GK+VAI+GLKSKAKYVRSELGRRMKLRLTPEIRF+EDES+ERGS Sbjct: 115 DLQVVKVYVSVFGDEKGKEVAIAGLKSKAKYVRSELGRRMKLRLTPEIRFVEDESLERGS 174 Query: 520 RVIAILDRLKDEKTVVESPDDQDQSSDLTEDNSW--DGDDPDEEGIIYVK 663 RVIAILDR+K+EK + S D +SSDL +D+ W DGDDPD E IIY+K Sbjct: 175 RVIAILDRIKNEKKMAGSQDQPSESSDLPQDDDWEGDGDDPD-ENIIYIK 223 >ref|XP_003631582.1| PREDICTED: probable ribosome-binding factor A, chloroplastic isoform 2 [Vitis vinifera] Length = 215 Score = 253 bits (646), Expect = 5e-65 Identities = 128/157 (81%), Positives = 144/157 (91%) Frame = +1 Query: 160 IKCMANQRRVKMVAKQIRRELSAMLLSDNVLQFAVLPEAALGADRYLSCLTTISDVEVSS 339 ++CMANQRRVKMVAKQIRRELS MLL+D VLQFAVLPEAALGADRYLS LTTISDVEVS+ Sbjct: 55 VRCMANQRRVKMVAKQIRRELSDMLLTDKVLQFAVLPEAALGADRYLSSLTTISDVEVSA 114 Query: 340 DLQVAKVYVSVFGDERGKDVAISGLKSKAKYVRSELGRRMKLRLTPEIRFIEDESIERGS 519 DLQV KVYVSVFGDE+GK+VAI+GLKSKAKYVRSELGRRMKLRLTPEIRF+EDES+ERGS Sbjct: 115 DLQVVKVYVSVFGDEKGKEVAIAGLKSKAKYVRSELGRRMKLRLTPEIRFVEDESLERGS 174 Query: 520 RVIAILDRLKDEKTVVESPDDQDQSSDLTEDNSWDGD 630 RVIAILDR+K+EK + S D +SSDL +D+ W+GD Sbjct: 175 RVIAILDRIKNEKKMAGSQDQPSESSDLPQDDDWEGD 211 >ref|XP_002513014.1| Ribosome-binding factor A, putative [Ricinus communis] gi|223548025|gb|EEF49517.1| Ribosome-binding factor A, putative [Ricinus communis] Length = 221 Score = 251 bits (642), Expect = 1e-64 Identities = 132/169 (78%), Positives = 150/169 (88%), Gaps = 1/169 (0%) Frame = +1 Query: 160 IKCMANQRRVKMVAKQIRRELSAMLLSDNVLQFAVLPEAALGADRYLSCLTTISDVEVSS 339 IKCMAN RRVKMVAKQI+RELS MLL+D VLQ+A+LPEAALGAD+YLS LTTISDVEVS+ Sbjct: 54 IKCMANPRRVKMVAKQIQRELSDMLLTDKVLQYAILPEAALGADKYLSSLTTISDVEVST 113 Query: 340 DLQVAKVYVSVFGDERGKDVAISGLKSKAKYVRSELGRRMKLRLTPEIRFIEDESIERGS 519 DLQV KVYVSVFGD+RGK+VAI+GLK+KAKYVRSELGRRMKLRLTPEIRFIEDES ERGS Sbjct: 114 DLQVVKVYVSVFGDDRGKEVAIAGLKAKAKYVRSELGRRMKLRLTPEIRFIEDESFERGS 173 Query: 520 RVIAILDRLKDEKTVVESPDDQDQSSDLTEDN-SWDGDDPDEEGIIYVK 663 RV+AILD++K EK S D+ +SSD +D+ W+GDDPD EGIIYVK Sbjct: 174 RVLAILDKIKAEKENTGSEDELSESSDSPQDDRDWEGDDPD-EGIIYVK 221 >ref|XP_004151338.1| PREDICTED: probable ribosome-binding factor A, chloroplastic-like [Cucumis sativus] gi|449529960|ref|XP_004171965.1| PREDICTED: probable ribosome-binding factor A, chloroplastic-like [Cucumis sativus] Length = 225 Score = 245 bits (625), Expect = 1e-62 Identities = 130/170 (76%), Positives = 147/170 (86%), Gaps = 2/170 (1%) Frame = +1 Query: 160 IKCMANQRRVKMVAKQIRRELSAMLLSDNVLQFAVLPEAALGADRYLSCLTTISDVEVSS 339 I+CMAN RR+KMVAKQI+RELS MLL+D VLQFA+LPEA+LGAD+YLS LTTI+DVEVS+ Sbjct: 57 IRCMANSRRIKMVAKQIQRELSDMLLTDKVLQFAILPEASLGADKYLSSLTTITDVEVSA 116 Query: 340 DLQVAKVYVSVFGDERGKDVAISGLKSKAKYVRSELGRRMKLRLTPEIRFIEDESIERGS 519 DLQV KVYVSVFGDERGKDVAI+GLKSKAKYVRS LG+RMKLRLTPEIRFIEDES ERGS Sbjct: 117 DLQVVKVYVSVFGDERGKDVAIAGLKSKAKYVRSVLGKRMKLRLTPEIRFIEDESFERGS 176 Query: 520 RVIAILDRLKDEK--TVVESPDDQDQSSDLTEDNSWDGDDPDEEGIIYVK 663 RVIAILDR+KD+K TV E D + S L +D W GDD DE+ IIYV+ Sbjct: 177 RVIAILDRIKDKKKDTVDEDFDQPELSDALDDDRDWKGDDADED-IIYVQ 225 >ref|XP_002306146.1| predicted protein [Populus trichocarpa] gi|222849110|gb|EEE86657.1| predicted protein [Populus trichocarpa] Length = 166 Score = 244 bits (623), Expect = 2e-62 Identities = 130/167 (77%), Positives = 146/167 (87%), Gaps = 2/167 (1%) Frame = +1 Query: 169 MANQRRVKMVAKQIRRELSAMLLSDNVLQFAVLPEAALGADRYLSCLTTISDVEVSSDLQ 348 MAN RRVKMVAKQI+RELS MLL+D VLQ+AVLPEAALGAD+YLS LTTISDVEVS+DLQ Sbjct: 1 MANPRRVKMVAKQIQRELSDMLLTDKVLQYAVLPEAALGADKYLSSLTTISDVEVSADLQ 60 Query: 349 VAKVYVSVFGDERGKDVAISGLKSKAKYVRSELGRRMKLRLTPEIRFIEDESIERGSRVI 528 V KVYVSVFGD+RGK+VAI+GLKSKAKYVRS+LGRRMKLRLTPEIRFIEDE +ERGSRVI Sbjct: 61 VVKVYVSVFGDDRGKEVAIAGLKSKAKYVRSQLGRRMKLRLTPEIRFIEDEGLERGSRVI 120 Query: 529 AILDRLKDEKTVVESPDDQ--DQSSDLTEDNSWDGDDPDEEGIIYVK 663 AILDR+K EK ES D+ D S+ + D W+GDDPDE+ IIYVK Sbjct: 121 AILDRIKAEKDNAESQVDELSDSSNSIQYDEDWEGDDPDED-IIYVK 166