BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00011686
         (943 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270280.1| PREDICTED: probable ribosome-binding factor ...   263   4e-68
ref|XP_003631582.1| PREDICTED: probable ribosome-binding factor ...   253   5e-65
ref|XP_002513014.1| Ribosome-binding factor A, putative [Ricinus...   251   1e-64
ref|XP_004151338.1| PREDICTED: probable ribosome-binding factor ...   245   1e-62
ref|XP_002306146.1| predicted protein [Populus trichocarpa] gi|2...   244   2e-62

>ref|XP_002270280.1| PREDICTED: probable ribosome-binding factor A, chloroplastic
           isoform 1 [Vitis vinifera]
          Length = 223

 Score =  263 bits (672), Expect = 4e-68
 Identities = 137/170 (80%), Positives = 153/170 (90%), Gaps = 2/170 (1%)
 Frame = +1

Query: 160 IKCMANQRRVKMVAKQIRRELSAMLLSDNVLQFAVLPEAALGADRYLSCLTTISDVEVSS 339
           ++CMANQRRVKMVAKQIRRELS MLL+D VLQFAVLPEAALGADRYLS LTTISDVEVS+
Sbjct: 55  VRCMANQRRVKMVAKQIRRELSDMLLTDKVLQFAVLPEAALGADRYLSSLTTISDVEVSA 114

Query: 340 DLQVAKVYVSVFGDERGKDVAISGLKSKAKYVRSELGRRMKLRLTPEIRFIEDESIERGS 519
           DLQV KVYVSVFGDE+GK+VAI+GLKSKAKYVRSELGRRMKLRLTPEIRF+EDES+ERGS
Sbjct: 115 DLQVVKVYVSVFGDEKGKEVAIAGLKSKAKYVRSELGRRMKLRLTPEIRFVEDESLERGS 174

Query: 520 RVIAILDRLKDEKTVVESPDDQDQSSDLTEDNSW--DGDDPDEEGIIYVK 663
           RVIAILDR+K+EK +  S D   +SSDL +D+ W  DGDDPD E IIY+K
Sbjct: 175 RVIAILDRIKNEKKMAGSQDQPSESSDLPQDDDWEGDGDDPD-ENIIYIK 223


>ref|XP_003631582.1| PREDICTED: probable ribosome-binding factor A, chloroplastic
           isoform 2 [Vitis vinifera]
          Length = 215

 Score =  253 bits (646), Expect = 5e-65
 Identities = 128/157 (81%), Positives = 144/157 (91%)
 Frame = +1

Query: 160 IKCMANQRRVKMVAKQIRRELSAMLLSDNVLQFAVLPEAALGADRYLSCLTTISDVEVSS 339
           ++CMANQRRVKMVAKQIRRELS MLL+D VLQFAVLPEAALGADRYLS LTTISDVEVS+
Sbjct: 55  VRCMANQRRVKMVAKQIRRELSDMLLTDKVLQFAVLPEAALGADRYLSSLTTISDVEVSA 114

Query: 340 DLQVAKVYVSVFGDERGKDVAISGLKSKAKYVRSELGRRMKLRLTPEIRFIEDESIERGS 519
           DLQV KVYVSVFGDE+GK+VAI+GLKSKAKYVRSELGRRMKLRLTPEIRF+EDES+ERGS
Sbjct: 115 DLQVVKVYVSVFGDEKGKEVAIAGLKSKAKYVRSELGRRMKLRLTPEIRFVEDESLERGS 174

Query: 520 RVIAILDRLKDEKTVVESPDDQDQSSDLTEDNSWDGD 630
           RVIAILDR+K+EK +  S D   +SSDL +D+ W+GD
Sbjct: 175 RVIAILDRIKNEKKMAGSQDQPSESSDLPQDDDWEGD 211


>ref|XP_002513014.1| Ribosome-binding factor A, putative [Ricinus communis]
           gi|223548025|gb|EEF49517.1| Ribosome-binding factor A,
           putative [Ricinus communis]
          Length = 221

 Score =  251 bits (642), Expect = 1e-64
 Identities = 132/169 (78%), Positives = 150/169 (88%), Gaps = 1/169 (0%)
 Frame = +1

Query: 160 IKCMANQRRVKMVAKQIRRELSAMLLSDNVLQFAVLPEAALGADRYLSCLTTISDVEVSS 339
           IKCMAN RRVKMVAKQI+RELS MLL+D VLQ+A+LPEAALGAD+YLS LTTISDVEVS+
Sbjct: 54  IKCMANPRRVKMVAKQIQRELSDMLLTDKVLQYAILPEAALGADKYLSSLTTISDVEVST 113

Query: 340 DLQVAKVYVSVFGDERGKDVAISGLKSKAKYVRSELGRRMKLRLTPEIRFIEDESIERGS 519
           DLQV KVYVSVFGD+RGK+VAI+GLK+KAKYVRSELGRRMKLRLTPEIRFIEDES ERGS
Sbjct: 114 DLQVVKVYVSVFGDDRGKEVAIAGLKAKAKYVRSELGRRMKLRLTPEIRFIEDESFERGS 173

Query: 520 RVIAILDRLKDEKTVVESPDDQDQSSDLTEDN-SWDGDDPDEEGIIYVK 663
           RV+AILD++K EK    S D+  +SSD  +D+  W+GDDPD EGIIYVK
Sbjct: 174 RVLAILDKIKAEKENTGSEDELSESSDSPQDDRDWEGDDPD-EGIIYVK 221


>ref|XP_004151338.1| PREDICTED: probable ribosome-binding factor A, chloroplastic-like
           [Cucumis sativus] gi|449529960|ref|XP_004171965.1|
           PREDICTED: probable ribosome-binding factor A,
           chloroplastic-like [Cucumis sativus]
          Length = 225

 Score =  245 bits (625), Expect = 1e-62
 Identities = 130/170 (76%), Positives = 147/170 (86%), Gaps = 2/170 (1%)
 Frame = +1

Query: 160 IKCMANQRRVKMVAKQIRRELSAMLLSDNVLQFAVLPEAALGADRYLSCLTTISDVEVSS 339
           I+CMAN RR+KMVAKQI+RELS MLL+D VLQFA+LPEA+LGAD+YLS LTTI+DVEVS+
Sbjct: 57  IRCMANSRRIKMVAKQIQRELSDMLLTDKVLQFAILPEASLGADKYLSSLTTITDVEVSA 116

Query: 340 DLQVAKVYVSVFGDERGKDVAISGLKSKAKYVRSELGRRMKLRLTPEIRFIEDESIERGS 519
           DLQV KVYVSVFGDERGKDVAI+GLKSKAKYVRS LG+RMKLRLTPEIRFIEDES ERGS
Sbjct: 117 DLQVVKVYVSVFGDERGKDVAIAGLKSKAKYVRSVLGKRMKLRLTPEIRFIEDESFERGS 176

Query: 520 RVIAILDRLKDEK--TVVESPDDQDQSSDLTEDNSWDGDDPDEEGIIYVK 663
           RVIAILDR+KD+K  TV E  D  + S  L +D  W GDD DE+ IIYV+
Sbjct: 177 RVIAILDRIKDKKKDTVDEDFDQPELSDALDDDRDWKGDDADED-IIYVQ 225


>ref|XP_002306146.1| predicted protein [Populus trichocarpa] gi|222849110|gb|EEE86657.1|
           predicted protein [Populus trichocarpa]
          Length = 166

 Score =  244 bits (623), Expect = 2e-62
 Identities = 130/167 (77%), Positives = 146/167 (87%), Gaps = 2/167 (1%)
 Frame = +1

Query: 169 MANQRRVKMVAKQIRRELSAMLLSDNVLQFAVLPEAALGADRYLSCLTTISDVEVSSDLQ 348
           MAN RRVKMVAKQI+RELS MLL+D VLQ+AVLPEAALGAD+YLS LTTISDVEVS+DLQ
Sbjct: 1   MANPRRVKMVAKQIQRELSDMLLTDKVLQYAVLPEAALGADKYLSSLTTISDVEVSADLQ 60

Query: 349 VAKVYVSVFGDERGKDVAISGLKSKAKYVRSELGRRMKLRLTPEIRFIEDESIERGSRVI 528
           V KVYVSVFGD+RGK+VAI+GLKSKAKYVRS+LGRRMKLRLTPEIRFIEDE +ERGSRVI
Sbjct: 61  VVKVYVSVFGDDRGKEVAIAGLKSKAKYVRSQLGRRMKLRLTPEIRFIEDEGLERGSRVI 120

Query: 529 AILDRLKDEKTVVESPDDQ--DQSSDLTEDNSWDGDDPDEEGIIYVK 663
           AILDR+K EK   ES  D+  D S+ +  D  W+GDDPDE+ IIYVK
Sbjct: 121 AILDRIKAEKDNAESQVDELSDSSNSIQYDEDWEGDDPDED-IIYVK 166