BLASTX nr result

ID: Cnidium21_contig00011674 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00011674
         (1175 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002534310.1| conserved hypothetical protein [Ricinus comm...   141   4e-31
emb|CAN62228.1| hypothetical protein VITISV_008028 [Vitis vinifera]   134   4e-29
ref|XP_002310570.1| predicted protein [Populus trichocarpa] gi|2...   122   2e-25
ref|XP_002307093.1| predicted protein [Populus trichocarpa] gi|2...   118   3e-24
ref|XP_003601970.1| hypothetical protein MTR_3g087390 [Medicago ...   117   4e-24

>ref|XP_002534310.1| conserved hypothetical protein [Ricinus communis]
            gi|223525518|gb|EEF28072.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 498

 Score =  141 bits (355), Expect = 4e-31
 Identities = 147/440 (33%), Positives = 171/440 (38%), Gaps = 130/440 (29%)
 Frame = -1

Query: 1175 FDP-----PIPTLTRPQTHSSILNLDMPSWSK-------------------SQTNPFFTT 1068
            FDP     P P LT P   +S+LNLDM  WSK                   S T  FFT 
Sbjct: 74   FDPLSSSRPPPPLTHP---NSLLNLDMV-WSKNLRSDTNCTDLGGFIATSSSPTQQFFTN 129

Query: 1067 QT---PMSFPQIS----EXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARNPKKRSRASR 909
            QT   P   P I     +                               RNPKKRSRASR
Sbjct: 130  QTQTGPTYNPSIQIPPVQETTAPSRGPGSASASGSNGHQTNNTTTTNIVRNPKKRSRASR 189

Query: 908  RAPTTVLTTDTSNFRAMVQEFTGIPAPPFTSSPFPRTRLDLFTSPTPSSFRSQPSNFNQN 729
            RAPTTVLTTDT+NFRAMVQEFTGIPAPPFTSSPFPR+RLDLF +   SS RS  S+   +
Sbjct: 190  RAPTTVLTTDTTNFRAMVQEFTGIPAPPFTSSPFPRSRLDLFGTAAASSLRSVVSHLEPS 249

Query: 728  H--HLLRPFPQKFQPQVSPFXXXXXXXXXXXXXSAPTT----------------TPPSDQ 603
            H  +LLRPF QK QP   PF             ++ TT                T  +  
Sbjct: 250  HPSYLLRPFAQKIQP---PFLSSSSSSSMIDAIASSTTTSTNINSNATTNTTTNTTSNSD 306

Query: 602  LGLLKPPQGXXXXXXXXXXXXXXXXLTFQSFLQPS----------------------SSN 489
            L LLK PQ                 L F S  QPS                       SN
Sbjct: 307  LSLLKYPQN-----LLNINMHNSPMLNFHSLFQPSPKYSLPNSSILATKPQEGSLDTPSN 361

Query: 488  D---------QFGLTSHHAQLNAN-------------NPSPHLSKVVSSPRNHQEDGN-- 381
            D         +FGL+  H   N                 S H S   SS  N+   GN  
Sbjct: 362  DPHLKMGVLEEFGLSHGHVSTNLTGLHNLVSSSDTTLRRSDHNSS-SSSNNNNNNSGNWG 420

Query: 380  ------------------GYNFSGSASS---------NLNFS--------GGKAVADNVS 306
                               YN + S+S+          +N+S        G K    NV 
Sbjct: 421  DRRVGSNEGDHLLRSINGNYNNNNSSSNTQRVVANNGKVNYSASSSDFNHGDKGPETNVV 480

Query: 305  ASGSTTRGEGLMDSWICSSD 246
               + TR EG+++SWICSSD
Sbjct: 481  V--ANTRSEGMVESWICSSD 498


>emb|CAN62228.1| hypothetical protein VITISV_008028 [Vitis vinifera]
          Length = 422

 Score =  134 bits (337), Expect = 4e-29
 Identities = 140/414 (33%), Positives = 167/414 (40%), Gaps = 104/414 (25%)
 Frame = -1

Query: 1175 FDPPIPTLTRPQTHSSILNLDMPSWSK------------------SQTNPFFTTQT---- 1062
            FDP   + T+ Q  +S+LNLDM  WSK                  S T PF   Q     
Sbjct: 33   FDPLSRSPTQLQNPNSLLNLDMV-WSKTLRSDPNCTEIGGILASSSSTPPFSGAQGQIRA 91

Query: 1061 --PMSFPQISEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARNPKKRSRASRRAPTTVL 888
              P S P +                                ARNPKKRSRASRRAPTTVL
Sbjct: 92   TFPSSLPSMP---------FPPAPENAARATASASNDQTNVARNPKKRSRASRRAPTTVL 142

Query: 887  TTDTSNFRAMVQEFTGIPAPPFTSSPFPRTRLDLFTSPTPSSFRSQPSNFNQNHHLLRPF 708
            TTDT+NFRAMVQEFTGIPA PFTSSPFPR+RLDLF   T S+ RS   +     +LLRPF
Sbjct: 143  TTDTTNFRAMVQEFTGIPAQPFTSSPFPRSRLDLF--GTASTMRSGHLDHAPPSYLLRPF 200

Query: 707  PQKFQP----QVSPFXXXXXXXXXXXXXSAPTTT-------------------PPSDQLG 597
             QK QP       P               A TT                     PSD LG
Sbjct: 201  AQKLQPPPFASPPPSSSSSFSSSSMVDAIASTTNITSGSASNTSSNSTSINYQLPSD-LG 259

Query: 596  LLKPPQGXXXXXXXXXXXXXXXXLTFQSFLQ-----------------------PSSSN- 489
            L+K PQ                 L+ QSFLQ                       PS+ + 
Sbjct: 260  LVKQPQN------LLNMNVQNPILSIQSFLQTPLKYPHPNSAIMGSKPQGSLEIPSTDSH 313

Query: 488  ------DQFGLTSHH-----------------AQLNANNPSPHLSKVVSSPRNHQE---- 390
                  + FGL+  H                 A  + NNP      + SS  NH +    
Sbjct: 314  IKMGGLEDFGLSHGHVNTHLSGLPNLVSSDRTASRSDNNPPSWNDGLGSSGGNHGQLGPL 373

Query: 389  DGNGYNFSGSASSNLNFSG------GKAVADNVSASGSTTRGEGLMDSWICSSD 246
            +GN  N     +  +N+S       G  V +NVS     TR EG+++SWICSSD
Sbjct: 374  NGNYNNSQRVTNGKMNYSASSSDFHGDKVPENVS-----TRSEGMVESWICSSD 422


>ref|XP_002310570.1| predicted protein [Populus trichocarpa] gi|222853473|gb|EEE91020.1|
           predicted protein [Populus trichocarpa]
          Length = 527

 Score =  122 bits (305), Expect = 2e-25
 Identities = 65/91 (71%), Positives = 72/91 (79%), Gaps = 3/91 (3%)
 Frame = -1

Query: 941 RNPKKRSRASRRAPTTVLTTDTSNFRAMVQEFTGIPAPPFTSSPFPRTRLDLFTSPTPSS 762
           RNPKKRSRASRRAPTTVLTTDT+NFRAMVQEFTGIPAPPFTSSPFPR+RLDLF     S+
Sbjct: 172 RNPKKRSRASRRAPTTVLTTDTTNFRAMVQEFTGIPAPPFTSSPFPRSRLDLF-GTAAST 230

Query: 761 FRSQPSNF---NQNHHLLRPFPQKFQPQVSP 678
            RS  S+    +   +LLRPF Q+FQP   P
Sbjct: 231 LRSAVSHHLDPSPPPYLLRPFAQRFQPPPPP 261


>ref|XP_002307093.1| predicted protein [Populus trichocarpa] gi|222856542|gb|EEE94089.1|
           predicted protein [Populus trichocarpa]
          Length = 510

 Score =  118 bits (295), Expect = 3e-24
 Identities = 63/90 (70%), Positives = 71/90 (78%), Gaps = 2/90 (2%)
 Frame = -1

Query: 941 RNPKKRSRASRRAPTTVLTTDTSNFRAMVQEFTGIPAPPFTSSPFPRTRLDLF--TSPTP 768
           RNPKKRSRASRRAPTTVL+TDT+NFRAMVQEFTGIPAPPFTSSPFPR+RLDLF   + T 
Sbjct: 180 RNPKKRSRASRRAPTTVLSTDTTNFRAMVQEFTGIPAPPFTSSPFPRSRLDLFGTAASTL 239

Query: 767 SSFRSQPSNFNQNHHLLRPFPQKFQPQVSP 678
            S  SQ  + +   +LL PF +KFQP   P
Sbjct: 240 RSAVSQHLDPSPPPYLLGPFAKKFQPPPPP 269


>ref|XP_003601970.1| hypothetical protein MTR_3g087390 [Medicago truncatula]
           gi|355491018|gb|AES72221.1| hypothetical protein
           MTR_3g087390 [Medicago truncatula]
          Length = 460

 Score =  117 bits (294), Expect = 4e-24
 Identities = 65/91 (71%), Positives = 69/91 (75%), Gaps = 4/91 (4%)
 Frame = -1

Query: 941 RNPKKRSRASRRAPTTVLTTDTSNFRAMVQEFTGIPAPPFTSSPFPRTRLDLF----TSP 774
           RNPKKRSRASRRAPTTVLTTDT+NFRAMVQEFTGIPAPPF SSPFPRTRLDLF    +S 
Sbjct: 185 RNPKKRSRASRRAPTTVLTTDTTNFRAMVQEFTGIPAPPF-SSPFPRTRLDLFGSSVSSR 243

Query: 773 TPSSFRSQPSNFNQNHHLLRPFPQKFQPQVS 681
           + SS    P       +LLRPF QK QP  S
Sbjct: 244 SLSSXMDPPPLHQAPPYLLRPFAQKIQPHYS 274


Top