BLASTX nr result
ID: Cnidium21_contig00011634
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cnidium21_contig00011634 (888 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004150740.1| PREDICTED: DNA-directed RNA polymerase II su... 339 6e-91 ref|NP_001236982.1| DNA-directed RNA polymerase II subunit RPB7 ... 337 2e-90 ref|XP_002282298.1| PREDICTED: DNA-directed RNA polymerase II su... 337 2e-90 gb|AFK39298.1| unknown [Lotus japonicus] 337 3e-90 dbj|BAJ94721.1| predicted protein [Hordeum vulgare subsp. vulgare] 337 3e-90 >ref|XP_004150740.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB7-like [Cucumis sativus] gi|449518487|ref|XP_004166273.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB7-like [Cucumis sativus] Length = 176 Score = 339 bits (869), Expect = 6e-91 Identities = 163/175 (93%), Positives = 172/175 (98%) Frame = -1 Query: 855 MFFHIVLERNMQLHPRHFGRDLRPKLVSKLMKDVEGTCSGRHGFIVAITGVENVGNGLIR 676 MFFHIVLERNMQLHPRHFGR+LR LVSKLMKDVEGTCSGRHGF+VAITG+EN+G GLIR Sbjct: 1 MFFHIVLERNMQLHPRHFGRNLRENLVSKLMKDVEGTCSGRHGFVVAITGIENIGKGLIR 60 Query: 675 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 496 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ Sbjct: 61 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 120 Query: 495 SGDMPNYTTSDGSVKIQKESEVRLKIIGTRVDATEIFCIGTIKDDFLGVISDPTS 331 SGD+PNYTTSDGSVKIQK+SEVRLKIIGTRVDATEIFCIGTIKDDFLGVI+DP++ Sbjct: 121 SGDVPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDPSA 175 >ref|NP_001236982.1| DNA-directed RNA polymerase II subunit RPB7 [Glycine max] gi|356512183|ref|XP_003524800.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB7-like [Glycine max] gi|1173137|sp|P46279.1|RPB7_SOYBN RecName: Full=DNA-directed RNA polymerase II subunit RPB7; Short=RNA polymerase II subunit B7 gi|170052|gb|AAA34005.1| RNA polymerase II [Glycine max] gi|255626843|gb|ACU13766.1| unknown [Glycine max] Length = 176 Score = 337 bits (865), Expect = 2e-90 Identities = 162/175 (92%), Positives = 171/175 (97%) Frame = -1 Query: 855 MFFHIVLERNMQLHPRHFGRDLRPKLVSKLMKDVEGTCSGRHGFIVAITGVENVGNGLIR 676 MFFHIVLERNMQLHPR+FGR+LR LVSKLMKDVEGTCSGRHGF+VA+TG+EN+G GLIR Sbjct: 1 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 60 Query: 675 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 496 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ Sbjct: 61 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 120 Query: 495 SGDMPNYTTSDGSVKIQKESEVRLKIIGTRVDATEIFCIGTIKDDFLGVISDPTS 331 SGDMPNYTTSDGSVKIQK+SEVRLKIIGTRVDATEIFCIGTIKDDFLGVI+DP + Sbjct: 121 SGDMPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDPAT 175 >ref|XP_002282298.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB7 [Vitis vinifera] gi|147841138|emb|CAN75204.1| hypothetical protein VITISV_042914 [Vitis vinifera] gi|297745997|emb|CBI16053.3| unnamed protein product [Vitis vinifera] Length = 176 Score = 337 bits (864), Expect = 2e-90 Identities = 163/175 (93%), Positives = 170/175 (97%) Frame = -1 Query: 855 MFFHIVLERNMQLHPRHFGRDLRPKLVSKLMKDVEGTCSGRHGFIVAITGVENVGNGLIR 676 MFFHIVLERNMQLHPRHFGR LR LV+KL+KDVEGTCSGRHGF+VAITG+ENVG GLIR Sbjct: 1 MFFHIVLERNMQLHPRHFGRHLRDNLVAKLVKDVEGTCSGRHGFVVAITGIENVGKGLIR 60 Query: 675 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 496 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ Sbjct: 61 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 120 Query: 495 SGDMPNYTTSDGSVKIQKESEVRLKIIGTRVDATEIFCIGTIKDDFLGVISDPTS 331 SGDMPNYTTSDGSVKIQK+SEVRLKIIGTRVDATEIFCIGTIKDDFLGVI+DP + Sbjct: 121 SGDMPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDPVT 175 >gb|AFK39298.1| unknown [Lotus japonicus] Length = 176 Score = 337 bits (863), Expect = 3e-90 Identities = 162/175 (92%), Positives = 171/175 (97%) Frame = -1 Query: 855 MFFHIVLERNMQLHPRHFGRDLRPKLVSKLMKDVEGTCSGRHGFIVAITGVENVGNGLIR 676 MFFHIVLERNMQLHPR+FGR+LR LV+KLMKDVEGTCSGRHGF+VA+TG+ENVG GLIR Sbjct: 1 MFFHIVLERNMQLHPRYFGRNLRDNLVAKLMKDVEGTCSGRHGFVVAVTGIENVGKGLIR 60 Query: 675 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 496 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ Sbjct: 61 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 120 Query: 495 SGDMPNYTTSDGSVKIQKESEVRLKIIGTRVDATEIFCIGTIKDDFLGVISDPTS 331 SGDMPNYTTSDGSVKIQK+SEVRLKIIGTRVDATEIFCIGTIKDDFLGVI+DP + Sbjct: 121 SGDMPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDPVA 175 >dbj|BAJ94721.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 236 Score = 337 bits (863), Expect = 3e-90 Identities = 163/179 (91%), Positives = 173/179 (96%) Frame = -1 Query: 873 QNTKQKMFFHIVLERNMQLHPRHFGRDLRPKLVSKLMKDVEGTCSGRHGFIVAITGVENV 694 + +++MFFHIVLERNMQLHPRHFG LR KLV+KLMKDVEGTCSGRHGF+VAITGVE++ Sbjct: 54 EEEEEEMFFHIVLERNMQLHPRHFGPHLRDKLVAKLMKDVEGTCSGRHGFVVAITGVEDI 113 Query: 693 GNGLIRDGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIP 514 G GLIR+GTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIP Sbjct: 114 GKGLIREGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIP 173 Query: 513 DDMEFQSGDMPNYTTSDGSVKIQKESEVRLKIIGTRVDATEIFCIGTIKDDFLGVISDP 337 DDMEFQSGD+PNYTTSDGSVKIQKESEVRLKIIGTRVDATEIFCIGTIKDDFLGVISDP Sbjct: 174 DDMEFQSGDVPNYTTSDGSVKIQKESEVRLKIIGTRVDATEIFCIGTIKDDFLGVISDP 232