BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00011633
         (971 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003598202.1| 60S ribosomal protein L23 [Medicago truncatu...   117   3e-24
ref|XP_002531249.1| hypothetical protein RCOM_0494170 [Ricinus c...   110   5e-22
ref|XP_003612608.1| Replication protein A 70 kDa DNA-binding sub...    94   4e-17
ref|XP_003605496.1| hypothetical protein MTR_4g032310 [Medicago ...    93   8e-17
ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative rib...    92   2e-16

>ref|XP_003598202.1| 60S ribosomal protein L23 [Medicago truncatula]
           gi|355487250|gb|AES68453.1| 60S ribosomal protein L23
           [Medicago truncatula]
          Length = 547

 Score =  117 bits (294), Expect = 3e-24
 Identities = 67/192 (34%), Positives = 105/192 (54%)
 Frame = -2

Query: 688 VLWGIWTARNFKVWENKVLSPEVAMQWSIKQVSQWREVQSLKTGRSNLRTQGQALEAGRW 509
           +LW IW  RN KVW+ ++    +A+Q + + + QW+  ++  T     + Q    +   W
Sbjct: 2   MLWCIWRRRNDKVWDGQLQPSNIAVQLARELLFQWQAARNSAT----TQVQQSPQDTIAW 57

Query: 508 KAPEVNKLKVNVDASVVPGSNSYSVGMILRDHMGGFRKARNLRCEGEVSVFEAEARGVLE 329
           + P    LK NVDA++    N +  GM +RD  G F KA     EG     EAEA G+ +
Sbjct: 58  QPPAAGFLKCNVDAAIFSEQNRFGTGMCVRDQRGRFLKAATNWYEGCPPPQEAEAVGLRD 117

Query: 328 AIRWVMELGVADVVVENDSMLTVQAIRKGAEILHEVGHLLQESRSLIQARSDISVSFIRK 149
           AI W+ +L +++V +E D  L V +I        E G ++ + RSL+Q  ++  +SF+R+
Sbjct: 118 AILWLGQLELSNVQLELDCKLVVDSIYDKNNNQAEFGSIIDDCRSLLQQFTNFKISFVRR 177

Query: 148 QANIVAHMLARV 113
           QAN+VAH  ARV
Sbjct: 178 QANVVAHSFARV 189


>ref|XP_002531249.1| hypothetical protein RCOM_0494170 [Ricinus communis]
           gi|223529168|gb|EEF31146.1| hypothetical protein
           RCOM_0494170 [Ricinus communis]
          Length = 329

 Score =  110 bits (275), Expect = 5e-22
 Identities = 69/198 (34%), Positives = 102/198 (51%)
 Frame = -2

Query: 664 RNFKVWENKVLSPEVAMQWSIKQVSQWREVQSLKTGRSNLRTQGQALEAGRWKAPEVNKL 485
           RN  +WE ++  P   +  ++  +  W    SL+   +  R     LE      P+   +
Sbjct: 120 RNLCLWEGQLQQPAQTVFCALSFLCDWASACSLQRNGNEARVM---LEVLTCCPPQPGFV 176

Query: 484 KVNVDASVVPGSNSYSVGMILRDHMGGFRKARNLRCEGEVSVFEAEARGVLEAIRWVMEL 305
           K NVD +V   S     GM++RD  G F    +    G  +V  AEA G+ EA++WV+ L
Sbjct: 177 KCNVDGAVFTASGRSGFGMVIRDSAGSFVMGADGSSPGLFNVKLAEAIGLREAVQWVLSL 236

Query: 304 GVADVVVENDSMLTVQAIRKGAEILHEVGHLLQESRSLIQARSDISVSFIRKQANIVAHM 125
           G ++V+ E D+ + V A+  GA  L E G ++ + R L+Q   + SV FIRKQAN+VAH 
Sbjct: 237 GRSNVIFEYDAKVVVDAVLSGAADLFEFGAVIADCRLLLQHGCNYSVQFIRKQANLVAHS 296

Query: 124 LARVPCEVNCSNDFSSPP 71
           LAR     +  N FS PP
Sbjct: 297 LARASHLQDGFNMFSVPP 314


>ref|XP_003612608.1| Replication protein A 70 kDa DNA-binding subunit [Medicago
            truncatula] gi|355513943|gb|AES95566.1| Replication
            protein A 70 kDa DNA-binding subunit [Medicago
            truncatula]
          Length = 1723

 Score = 94.4 bits (233), Expect = 4e-17
 Identities = 57/192 (29%), Positives = 90/192 (46%), Gaps = 1/192 (0%)
 Frame = -2

Query: 688  VLWGIWTARNFKVWENKVLSPEVAMQWSIKQVSQWREVQSLKTGRSNLRTQGQALEAGRW 509
            V+W IW  RN  +W N+V++        +  ++ W+  Q +                  W
Sbjct: 1523 VMWSIWKQRNDCIWRNEVMTTAAVRDRGLNLLTGWQNAQDI------------------W 1564

Query: 508  KAPEVNKLKVNVDASVVPGSNSYSVGMILRDHMGGFRKARNLRCEGEVSVFEAEARGVLE 329
            + P+    K NVDA+    SN   +G+ +RD  G   KAR       + V E EA G+L 
Sbjct: 1565 RKPDEGHFKCNVDAAFFKESNRVGIGICIRDDSGRLVKARTSWSTLLLDVPEGEAIGLLY 1624

Query: 328  AIRWVMELGVADVVVENDSMLTVQAIRKGAEILHEVGHLLQESRSLIQA-RSDISVSFIR 152
            AIRW  E  + ++  E DS   V +       + ++G +++E R+   +  ++  V FIR
Sbjct: 1625 AIRWAKEQNLNNITFELDSKRVVYSFHNTRNDVSDLGAIIRECRTTFSSFFTNSRVEFIR 1684

Query: 151  KQANIVAHMLAR 116
            +QAN V H LAR
Sbjct: 1685 RQANEVVHSLAR 1696


>ref|XP_003605496.1| hypothetical protein MTR_4g032310 [Medicago truncatula]
           gi|355506551|gb|AES87693.1| hypothetical protein
           MTR_4g032310 [Medicago truncatula]
          Length = 283

 Score = 93.2 bits (230), Expect = 8e-17
 Identities = 63/215 (29%), Positives = 106/215 (49%), Gaps = 7/215 (3%)
 Frame = -2

Query: 694 AEVLWGIWTARNFKVWENKVLSPEVAMQWSIKQVSQWRE------VQSLKTGRSNLRTQG 533
           A VLW +W +RN ++W+N   + +  ++ + + ++ WR       VQ  +T  S    + 
Sbjct: 62  ASVLWSLWKSRNLRLWQNVRETSQAILECAKQILANWRTANRNTAVQQTETATS----RA 117

Query: 532 QALEAGRWKAPEVNKLKVNVDASVVPGSNSYSVGMILRDHMGGFRKARNLRCEGEVSVFE 353
           QA+++  W+ P   +LK NVD S     N    G  +R+  G   KA+ +      +   
Sbjct: 118 QAVQSF-WQKPAHCRLKCNVDVSFSEALNCVGFGFCIRNEFGNLIKAKTMWSNPVFASDV 176

Query: 352 AEARGVLEAIRWVMELGVADVVVENDSMLTVQAIRKGAEILHEVGHLLQE-SRSLIQARS 176
            EA G+  AIRWV EL + ++  E D+   V     G+  + E G +++E  RS     +
Sbjct: 177 GEALGLSNAIRWVHELQLLNINFELDAKKVVDYFNNGSNDISEFGSIVEECRRSHNFYFA 236

Query: 175 DISVSFIRKQANIVAHMLARVPCEVNCSNDFSSPP 71
           +  V F R+QAN VAH LA+    +   ++F+  P
Sbjct: 237 NSKVEFSRRQANEVAHTLAQEATSLASPHNFNDVP 271


>ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative ribonuclease H protein
            At1g65750-like [Vitis vinifera]
          Length = 820

 Score = 92.0 bits (227), Expect = 2e-16
 Identities = 59/221 (26%), Positives = 100/221 (45%), Gaps = 5/221 (2%)
 Frame = -2

Query: 688  VLWGIWTARNFKVWENKVLSPEVAMQWSIKQVSQWREVQSLKTGRSNLRTQGQALEAGRW 509
            V WG+W  RN  VW  ++   +  +      +  W            + +      + +W
Sbjct: 610  VCWGLWWRRNDVVWNGRIWHSQQVVNGCFTMLESWFHANETLATAVTVPSY-----SSKW 664

Query: 508  KAPEVNKLKVNVDASVVPGSNSYSVGMILRDH----MGGFRKARNLRCEGEVSVFEAEAR 341
            + P+   +K+NVD +V P   +  +G + RDH    MGGF K    +   +V     EA 
Sbjct: 665  QKPDYGWIKINVDGAVFPDKGA--IGAVFRDHQGRFMGGFAKPFPHQTLPKV----VEAL 718

Query: 340  GVLEAIRWVMELGVADVVVENDSMLTVQAIRKGAEILHEVGHLLQESRSLIQARSDISVS 161
            GV E + W+ E   + +VVE D +  VQAI+  +      G ++ +   ++Q   D+ V 
Sbjct: 719  GVREVLSWIHERSRSRIVVETDCLRVVQAIQHKSCPNTSFGFIIVDCLDVLQHLVDVQVV 778

Query: 160  FIRKQANIVAHMLARVPCEVNCSNDFS-SPPRMVLESMMYD 41
            + R+ AN  AH LA   C     + +  +PP+ +L  + YD
Sbjct: 779  YARRSANSAAHCLANGACSFTSLHIWGYTPPQCILSCLHYD 819