BLASTX nr result

ID: Cnidium21_contig00011619 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00011619
         (1700 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002311805.1| chromatin remodeling complex subunit [Populu...   160   7e-37
emb|CBI26124.3| unnamed protein product [Vitis vinifera]              157   1e-35
ref|XP_002516857.1| conserved hypothetical protein [Ricinus comm...   117   7e-24
ref|XP_003609575.1| Helicase swr1 [Medicago truncatula] gi|35551...   104   8e-20
ref|XP_003609574.1| Helicase swr1 [Medicago truncatula] gi|35551...   104   8e-20

>ref|XP_002311805.1| chromatin remodeling complex subunit [Populus trichocarpa]
            gi|222851625|gb|EEE89172.1| chromatin remodeling complex
            subunit [Populus trichocarpa]
          Length = 3427

 Score =  160 bits (406), Expect = 7e-37
 Identities = 149/483 (30%), Positives = 194/483 (40%), Gaps = 9/483 (1%)
 Frame = +3

Query: 3    EEQWTEDEFEKLCQAESPHSPKMKDEVKEMNLPMVTSENSDVDVKAEMMVPSEQPIQPPV 182
            EEQWTE+EFEK+C+AESP SP  K+E  E NL    S +      +E   P + P  PP 
Sbjct: 1684 EEQWTEEEFEKMCEAESPDSPMRKEETGERNLLKDASGSLLAIGSSEPQAPPQLPRPPPS 1743

Query: 183  AQSVQPTLAXXXXXXXXXXXXXXXKTTEPPLVHSTQSLAAQSGPLQQAALSPVQAAYPSV 362
             +   P  +                 +  PL            P     L P  +A P  
Sbjct: 1744 VEPPPPPPSVEPLPPPPSVEPLPPPPSAEPL----------PPPPSAEPLPPPPSAEPLP 1793

Query: 363  SQAGHTPIMQPTQRSKDTAP-KRGRGRPKRLTTQISPSHVAVPSLSGTGNTSMGSQTGTV 539
                  P+    Q+SK+  P KRGRGRP+R+T   +P  +A+    GTG      Q G  
Sbjct: 1794 PPPSVGPL--SLQQSKEVTPSKRGRGRPRRVTLDKAPVAMALSVPLGTGKVDTELQKGME 1851

Query: 540  SNSFVEAGLDHVPSSAVG-NSFGTIQQSGGVDXXXXXXXXXXXXXXXXXXXVPCPIPVPD 716
            S S   +  D  P   +G NS GT     G+                        +P+  
Sbjct: 1852 SCSSKTSAPDSSPVPNLGSNSRGTPHSGSGISPCTQPITPVSVTLGTQTTPASLSMPLQS 1911

Query: 717  KRRGRKGQSGVETPRRRGRKPIVGASTTPLLSPSHGTENLSMVSKGEXXXXXXXXXXXXX 896
            + RGRK Q GV+TPRRRG+   V  S+TP  S                            
Sbjct: 1912 RGRGRKVQGGVQTPRRRGKNQ-VAISSTPASS---------------------------- 1942

Query: 897  XXXKGVDKETXXXXXXXXXXXXEKIKPQDVQVSSSCFLSNPSVPA-GTSVKADELHAGTS 1073
                                    I  Q V VS      NPS+ A G +V +    A  S
Sbjct: 1943 ------------------AVPDPNINDQSVNVS-----VNPSIIAMGGTVSS----APMS 1975

Query: 1074 NPEQNVPFSPLPPEAQAAT----VGTDTSSQQNPQLSSVTSVAQSTSPSQVVPKQVKGRG 1241
                N+P S       A T     GT   S+  P   S++ + QS +PS  VP QVKG+ 
Sbjct: 1976 QHPSNLPGSAAAEGTNATTHHSGPGTTLDSEPKPPNPSISPIIQSIAPSPSVPMQVKGQN 2035

Query: 1242 SKIQSENETPRRRGRKQIAASTAVPGGSGGQELTSSEP--PQKKSRVSSGKTAVASRRKQ 1415
             K QS   TPRRRGRK++  S +VP  S GQ L+ S P   Q KS  SSG  A+ +   Q
Sbjct: 2036 QKTQSGTGTPRRRGRKEVPVSPSVPDVSDGQ-LSKSNPTLSQDKSGESSGSKAIFTMSNQ 2094

Query: 1416 QNE 1424
            QN+
Sbjct: 2095 QND 2097



 Score = 65.1 bits (157), Expect = 5e-08
 Identities = 70/216 (32%), Positives = 97/216 (44%), Gaps = 34/216 (15%)
 Frame = +3

Query: 1149 SQQNPQLSSVTSVAQSTSPSQVVPKQVKGRGSKIQSENETPRRRGRKQIAASTAVPGGSG 1328
            SQ+     SVT + QS +P  +   QVK +G K  +  ETPRRRG+KQ + S AV   S 
Sbjct: 2246 SQEISSYPSVTPIFQSNTPEAM---QVKRQGRKAPTRVETPRRRGKKQGSVSLAV-DASV 2301

Query: 1329 GQELTSSEPPQKKSRVSSGKTAVASRRKQQNETQDLVNVIQ---------------AEAS 1463
             Q+   +   Q KSR S G  A++ R  Q N+ ++L NV+Q                EAS
Sbjct: 2302 DQDPIINAQTQNKSRDSLGGMAMSLRSGQGNDFKELKNVVQEACVPSGLVGQDPKRKEAS 2361

Query: 1464 ------EVHTSD---------SVVDPALSDKT-DRPYQSVENIQA-TSSTLAMEVAV--R 1586
                  ++ TSD          +     S KT    Y  VE   A  SS +++EVA    
Sbjct: 2362 GIPAFGQIQTSDVTDVARVMKEIFSETCSSKTKSGDYSGVEVRSAPVSSKMSVEVAKDRS 2421

Query: 1587 SPSKEFANVKVSQLDMPVSGDATLLTKMEASQSGVK 1694
            S  K  + V V + + PV   +   +K   S  GVK
Sbjct: 2422 SDCKALSAVSVLEAEAPVMRSSIDDSKQSGSGDGVK 2457


>emb|CBI26124.3| unnamed protein product [Vitis vinifera]
          Length = 2266

 Score =  157 bits (396), Expect = 1e-35
 Identities = 144/473 (30%), Positives = 190/473 (40%), Gaps = 6/473 (1%)
 Frame = +3

Query: 3    EEQWTEDEFEKLCQAESPHSPKMKDEVKEMNLPMVTSENSDVDVKAEMMVPSEQPIQPPV 182
            EEQWTE+EFEKLCQ +SP SPK+K+E+ E NLP+ +S         E   P+  P  P  
Sbjct: 1660 EEQWTEEEFEKLCQVDSPESPKLKEEMVETNLPIDSSGPVVATSNTESPAPAPAPAAPAA 1719

Query: 183  AQSVQPTLAXXXXXXXXXXXXXXXKTTEPPLVHSTQSLAAQSGPLQQAALSPVQAAYPSV 362
              +  P  A                              A + P    A +P     PS 
Sbjct: 1720 PAAPAPAPA--------------------------APAPAPAAPAPAPAPAPPPPPPPSA 1753

Query: 363  SQAGHTPIMQPTQRSKDTAP--KRGRGRPKRLTTQISPSHVAVPSLSGTGNTSMGSQTGT 536
                   +  P Q+SK+  P  +RGRGRPKR T  IS S V  P+ SG      GSQ G 
Sbjct: 1754 PS-----VEPPPQQSKEVTPPSRRGRGRPKRATLDIS-SAVVHPAPSGAEKLDTGSQKGN 1807

Query: 537  VSNSFVEAGLDHVPSSAVGNSFGTIQQSGGVDXXXXXXXXXXXXXXXXXXXVP-CPIPVP 713
            VS+    +G    P         +   + GV                    VP   +PV 
Sbjct: 1808 VSSFPTASGPHSFPGPTAVKGTSSSMHNVGVGVPAIPPQSLPPVPPGSQSTVPDSSVPVQ 1867

Query: 714  DKRRGRKGQSGVETPRRRGRKPIVGASTTPLLSPSHGTENLSMVSKGEXXXXXXXXXXXX 893
             K +GRK QSG E PRRRG+K    AS  P +  +   ++  +  + +            
Sbjct: 1868 VKGQGRKAQSGGEGPRRRGKKQ---ASVPPAVPDALAGQDPKLNEQSQNKLGDPK----- 1919

Query: 894  XXXXKGVDKETXXXXXXXXXXXXEKIKPQDVQVSSSCFLSNP---SVPAGTSVKADELHA 1064
                  +++ +                  D  +++S F + P   SVPA T+VK+     
Sbjct: 1920 ------LNEPSQNKLGDPKLNEQSHNNTGDSILTASSFPTTPGPDSVPASTTVKS----- 1968

Query: 1065 GTSNPEQNVPFSPLPPEAQAATVGTDTSSQQNPQLSSVTSVAQSTSPSQVVPKQVKGRGS 1244
                         +    Q   VG   SSQ  P L  V S ++ST P   V  QVKG+G 
Sbjct: 1969 -------------ISGTVQHFGVGIAPSSQAAPPLHLVASDSKSTPPCPPVVTQVKGQGR 2015

Query: 1245 KIQSENETPRRRGRKQIAASTAVPGGSGGQELTSSEPPQKKSRVSSGKTAVAS 1403
            K QS  E PRRRGRKQ     AVPGG     L   EP  + S+  SG    AS
Sbjct: 2016 KTQSGAEAPRRRGRKQALLPPAVPGG-----LVGEEPANQGSQNKSGDLVGAS 2063



 Score = 85.1 bits (209), Expect = 5e-14
 Identities = 59/180 (32%), Positives = 84/180 (46%), Gaps = 10/180 (5%)
 Frame = +3

Query: 1032 GTSVKADELHAGTSNPEQNVPFSPLPPEAQAATV----------GTDTSSQQNPQLSSVT 1181
            G+  K+ +L   +S    ++P +P P    A  V          G   SSQ  P   SV 
Sbjct: 2051 GSQNKSGDLVGASSGTVSSLPVAPGPTPVSAVKVISGTMHHFGVGIAPSSQPVPPSPSVA 2110

Query: 1182 SVAQSTSPSQVVPKQVKGRGSKIQSENETPRRRGRKQIAASTAVPGGSGGQELTSSEPPQ 1361
              +QST P    P +VKG+  K QS    PRRRG+KQ       P    GQ   SSE  Q
Sbjct: 2111 PSSQSTPPCPTAPVRVKGQSQKAQSGAGAPRRRGKKQCPIPPGAPDSLAGQVPKSSEKAQ 2170

Query: 1362 KKSRVSSGKTAVASRRKQQNETQDLVNVIQAEASEVHTSDSVVDPALSDKTDRPYQSVEN 1541
             KS    G  A+A   +Q+ ++++L N IQ +A ++ TS+ +    L   T +P  S +N
Sbjct: 2171 SKSGDLLGSKAIAVGSEQEKDSRELANAIQQKACKIPTSNVLAGVDLK-STKQPDYSAQN 2229


>ref|XP_002516857.1| conserved hypothetical protein [Ricinus communis]
            gi|223543945|gb|EEF45471.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 3502

 Score =  117 bits (294), Expect = 7e-24
 Identities = 162/619 (26%), Positives = 241/619 (38%), Gaps = 54/619 (8%)
 Frame = +3

Query: 3    EEQWTEDEFEKLCQAESPHSPKMKDEVKEMNLPMVTSENSDVDVKAEMMVPSEQPIQP-P 179
            EEQWTE+EFEK+CQ +SP SP MK+E+ E NLP    ++  V V A  +  ++ P+ P P
Sbjct: 1615 EEQWTEEEFEKMCQVDSPESPSMKEEITERNLP----KDDSVPVVAICVTEAQAPLPPLP 1670

Query: 180  VAQSVQPTLAXXXXXXXXXXXXXXXKTTEPPLVHSTQSLAAQSGPLQQAALSPVQAAYPS 359
              Q+++P                      PP                QA   P QA  P 
Sbjct: 1671 PPQAMEP----------------------PP----------------QAMEPPPQAVEP- 1691

Query: 360  VSQAGHTPIMQPTQRSKDTAP--KRGRGRPKRLTTQISPSHVAVPSLSGTGNTSMGSQTG 533
                       P Q+SK+  P  KRGRGRP+R T+  SP+ V  P+ SG G    G Q G
Sbjct: 1692 ----------PPLQQSKEVTPPSKRGRGRPRRTTSDKSPTAVVHPASSGNGKADSGLQKG 1741

Query: 534  ---TVSNSFVEAGLDHVPSSAVGNSFGTI-----QQSGGVDXXXXXXXXXXXXXXXXXXX 689
                 S SF       VP S+ G+  G       Q S G+                    
Sbjct: 1742 IELIPSKSF-------VPDSSSGSDIGVTNIAAPQASIGI-------------------- 1774

Query: 690  VPCPIP----VPDKRRGRKGQSGVETPRRRGRKPIV---GASTT--PLLSPSHGTENLSM 842
             PC  P    V      +   + V TP  +     V   G+ +T   +++P   + + S+
Sbjct: 1775 APCSEPTTPSVSVTPSSQSTAASVVTPGLQSNSASVVTPGSQSTSASVVTPGFLSNSASV 1834

Query: 843  VSKGEXXXXXXXXXXXXXXXXKGVDKETXXXXXXXXXXXXEKIKPQDVQVSSSCFLSNPS 1022
            ++ G                 +G   ++            E I P    ++    +  PS
Sbjct: 1835 ITPG-VQSAPAGSPVLIQSRGRGRKAQSGVQAPRRRGKKQEAILPAPQNLA----VPAPS 1889

Query: 1023 V-PAGTSVKADELHAGTSNPEQNVPFSPLPPEAQAATV----GTDTS-------SQQNPQ 1166
            +         ++L + TS    +VP +       AAT     GT  S       S+  P 
Sbjct: 1890 INDQSHDTSVNQLVSVTSGTVSSVPMAHCQSSLSAATTELTSGTTNSEPVIALDSKSAPP 1949

Query: 1167 LSSVTSVAQSTSPSQVVPKQVKGRGSKIQS--ENETPRRRGRKQIAASTAVPGGSGGQEL 1340
            +SS ++  Q ++P    P Q+KG+G K QS     TPRRRGRKQ   S   P     Q +
Sbjct: 1950 ISSNSTTVQCSAPCPSAPTQMKGQGRKTQSGAGAGTPRRRGRKQAMISPVYPDALVSQ-V 2008

Query: 1341 TSSEPPQKKSRVSSGKTAVASRRKQQNETQDLVNVIQAEASEVHTSDSVVDPALSD--KT 1514
             S +  Q KS   SG  A      Q+    +  ++   ++++    D      L D  +T
Sbjct: 2009 ISDKLLQMKSEEPSGSKATVVMSSQETHGCEQKDIDLDKSTKFSGQDKKSAKQLDDVAQT 2068

Query: 1515 DRPY-QSVENIQAT-----------SSTLAMEV-AVRSPSK----EFANV-KVSQLDMPV 1640
             +P   S  NI  +           +++L ME  A  SPSK    E  NV  +S L   +
Sbjct: 2069 RQPICSSAMNIGTSPGQILSADMRDAASLTMEFSAENSPSKAKVGEQGNVGSISLLTPTI 2128

Query: 1641 SGDATLLTKMEASQSGVKP 1697
            +  +T +   + S+    P
Sbjct: 2129 TNTSTEVVLSQCSEDKACP 2147


>ref|XP_003609575.1| Helicase swr1 [Medicago truncatula] gi|355510630|gb|AES91772.1|
            Helicase swr1 [Medicago truncatula]
          Length = 3310

 Score =  104 bits (259), Expect = 8e-20
 Identities = 139/591 (23%), Positives = 205/591 (34%), Gaps = 59/591 (9%)
 Frame = +3

Query: 3    EEQWTEDEFEKLCQAESPHSPKMKDEVKEMNLPM-VTSENSDVDVKAEMMVPSEQPIQPP 179
            EEQWTE+EFEK+CQ E+P SPK+K    E++ P   T       VK    VP   P+ PP
Sbjct: 1650 EEQWTEEEFEKMCQTETPDSPKVKG--SEVSHPTNTTGSVVSATVKKPAAVPPVAPMLPP 1707

Query: 180  VAQSVQPTLAXXXXXXXXXXXXXXXKTTEPPLVHSTQSLAAQSGPLQQAALSPVQAAYPS 359
            VA  + P++                     P++ S +SL                     
Sbjct: 1708 VA-PILPSVV--------------------PILPSVESL--------------------- 1725

Query: 360  VSQAGHTPIMQPTQRSKDTAP--KRGRGRPKRLTTQISPSHVAVP--------------- 488
                       P Q  K+  P  KRGRGRPKR+ +  SP+ V  P               
Sbjct: 1726 -----------PVQHVKEITPPAKRGRGRPKRIASDKSPAAVIPPVTSRIAEVQLQKGNE 1774

Query: 489  ----------------SLSGTGNTSMGSQTGTVSNSFVEAGLDHVP------SSAVGNSF 602
                             ++G G     S TG  +N      +   P      ++ +  + 
Sbjct: 1775 PGHLTSSAPDTVGHSAEVTGVGGPMQQSTTGVTANIPPATPMPTNPLNSQSAATPMPTNT 1834

Query: 603  GTIQQSGGVDXXXXXXXXXXXXXXXXXXXVPCPIPVPDKRRGRKGQSGVETPRRRGRKPI 782
            G +QQS                           +P+  K RGRK QSG E PRRRG+K +
Sbjct: 1835 GPVQQSN-----TEVAANVLSATPMLSQSAAASVPIHAKGRGRKTQSGREWPRRRGKKQV 1889

Query: 783  VGASTTPLLSPSHGTENLSMVSKGEXXXXXXXXXXXXXXXXKGVDKETXXXXXXXXXXXX 962
            V +   P  S                                G D +             
Sbjct: 1890 VMSPPVPASS-------------------------------VGPDVKINEQLEDKIVSPS 1918

Query: 963  EKIKPQDVQVSSSCFLSNPSVPAGTSVKADELHAGTSNPEQNVPFS---PLPPEAQAATV 1133
             ++ PQ   V S+  + +P     T+V     + G  N   +V  +   PL P       
Sbjct: 1919 GQVIPQSETVPSATAVHHP-----TAVSVSASNCGNDNLGVDVVLNSQLPLLP------- 1966

Query: 1134 GTDTSSQQNPQLSSVTSVAQSTSPSQVVPKQVKGRGSKIQSENETPRRRGRKQIAASTAV 1313
                       L SVT+++ +      V  Q KG+  K Q    TPRRRG+KQ   S  V
Sbjct: 1967 -----------LPSVTTLSPTVPSDPSVQMQSKGQIGKSQVGAGTPRRRGKKQATMSPPV 2015

Query: 1314 PGGSGGQELTSSEPPQKKSRVSSGKTAVASRRKQQNETQDLVNVIQAEASEVH------- 1472
            P   G Q +  +      S   SG          +N  Q+   +IQ +AS+ +       
Sbjct: 2016 PVVLGLQSMDPTSNLPTSSDAVSGDKRTELSNLLENNVQESKCIIQDQASQNNQALKTLD 2075

Query: 1473 -----TSDSVVDPALSDKT----DRPYQSVENIQATSSTLAMEVAVRSPSK 1598
                    +V+ P+  D T     +  + V+N     S++ +  +  +PSK
Sbjct: 2076 ESDDLAKQAVISPSCEDSTVNSQGQDLEKVKNADVHDSSVKINSSETTPSK 2126


>ref|XP_003609574.1| Helicase swr1 [Medicago truncatula] gi|355510629|gb|AES91771.1|
            Helicase swr1 [Medicago truncatula]
          Length = 3312

 Score =  104 bits (259), Expect = 8e-20
 Identities = 139/591 (23%), Positives = 205/591 (34%), Gaps = 59/591 (9%)
 Frame = +3

Query: 3    EEQWTEDEFEKLCQAESPHSPKMKDEVKEMNLPM-VTSENSDVDVKAEMMVPSEQPIQPP 179
            EEQWTE+EFEK+CQ E+P SPK+K    E++ P   T       VK    VP   P+ PP
Sbjct: 1650 EEQWTEEEFEKMCQTETPDSPKVKG--SEVSHPTNTTGSVVSATVKKPAAVPPVAPMLPP 1707

Query: 180  VAQSVQPTLAXXXXXXXXXXXXXXXKTTEPPLVHSTQSLAAQSGPLQQAALSPVQAAYPS 359
            VA  + P++                     P++ S +SL                     
Sbjct: 1708 VA-PILPSVV--------------------PILPSVESL--------------------- 1725

Query: 360  VSQAGHTPIMQPTQRSKDTAP--KRGRGRPKRLTTQISPSHVAVP--------------- 488
                       P Q  K+  P  KRGRGRPKR+ +  SP+ V  P               
Sbjct: 1726 -----------PVQHVKEITPPAKRGRGRPKRIASDKSPAAVIPPVTSRIAEVQLQKGNE 1774

Query: 489  ----------------SLSGTGNTSMGSQTGTVSNSFVEAGLDHVP------SSAVGNSF 602
                             ++G G     S TG  +N      +   P      ++ +  + 
Sbjct: 1775 PGHLTSSAPDTVGHSAEVTGVGGPMQQSTTGVTANIPPATPMPTNPLNSQSAATPMPTNT 1834

Query: 603  GTIQQSGGVDXXXXXXXXXXXXXXXXXXXVPCPIPVPDKRRGRKGQSGVETPRRRGRKPI 782
            G +QQS                           +P+  K RGRK QSG E PRRRG+K +
Sbjct: 1835 GPVQQSN-----TEVAANVLSATPMLSQSAAASVPIHAKGRGRKTQSGREWPRRRGKKQV 1889

Query: 783  VGASTTPLLSPSHGTENLSMVSKGEXXXXXXXXXXXXXXXXKGVDKETXXXXXXXXXXXX 962
            V +   P  S                                G D +             
Sbjct: 1890 VMSPPVPASS-------------------------------VGPDVKINEQLEDKIVSPS 1918

Query: 963  EKIKPQDVQVSSSCFLSNPSVPAGTSVKADELHAGTSNPEQNVPFS---PLPPEAQAATV 1133
             ++ PQ   V S+  + +P     T+V     + G  N   +V  +   PL P       
Sbjct: 1919 GQVIPQSETVPSATAVHHP-----TAVSVSASNCGNDNLGVDVVLNSQLPLLP------- 1966

Query: 1134 GTDTSSQQNPQLSSVTSVAQSTSPSQVVPKQVKGRGSKIQSENETPRRRGRKQIAASTAV 1313
                       L SVT+++ +      V  Q KG+  K Q    TPRRRG+KQ   S  V
Sbjct: 1967 -----------LPSVTTLSPTVPSDPSVQMQSKGQIGKSQVGAGTPRRRGKKQATMSPPV 2015

Query: 1314 PGGSGGQELTSSEPPQKKSRVSSGKTAVASRRKQQNETQDLVNVIQAEASEVH------- 1472
            P   G Q +  +      S   SG          +N  Q+   +IQ +AS+ +       
Sbjct: 2016 PVVLGLQSMDPTSNLPTSSDAVSGDKRTELSNLLENNVQESKCIIQDQASQNNQALKTLD 2075

Query: 1473 -----TSDSVVDPALSDKT----DRPYQSVENIQATSSTLAMEVAVRSPSK 1598
                    +V+ P+  D T     +  + V+N     S++ +  +  +PSK
Sbjct: 2076 ESDDLAKQAVISPSCEDSTVNSQGQDLEKVKNADVHDSSVKINSSETTPSK 2126


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