BLASTX nr result

ID: Cnidium21_contig00011590 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00011590
         (508 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002298494.1| predicted protein [Populus trichocarpa] gi|2...   159   3e-37
gb|ABK95593.1| unknown [Populus trichocarpa]                          159   3e-37
ref|XP_004166686.1| PREDICTED: LRR repeats and ubiquitin-like do...   147   9e-34
ref|XP_004143220.1| PREDICTED: uncharacterized protein LOC101207...   147   9e-34
ref|XP_002879249.1| ubiquitin family protein [Arabidopsis lyrata...   145   4e-33

>ref|XP_002298494.1| predicted protein [Populus trichocarpa] gi|222845752|gb|EEE83299.1|
           predicted protein [Populus trichocarpa]
          Length = 371

 Score =  159 bits (401), Expect = 3e-37
 Identities = 84/141 (59%), Positives = 103/141 (73%), Gaps = 3/141 (2%)
 Frame = +1

Query: 79  ESSGEATMIKITVKFSGRSIPINLSLDSTIKHLKILLQPLTNVLPRGQKLIFSGKVLEDE 258
           E  G+ T I ITVKFSGRSIPI++SLDS IK +K LLQPLTNVLPRGQKLIF GK+L D 
Sbjct: 2   EVEGQDTAINITVKFSGRSIPISVSLDSKIKDVKSLLQPLTNVLPRGQKLIFKGKLLVDG 61

Query: 259 KTLRLSELKNGSKIMLIASQSLHQGDGPIKKEATEVPMSRRRPESNK---DRKPMAVQNN 429
            TLR SE+ NG+K+ML+ASQ LHQGDGPI K+A   P+SR    SNK   ++  +    N
Sbjct: 62  MTLRESEVTNGAKVMLMASQGLHQGDGPILKDAKTRPISRANTSSNKTVNEKIGVLFDKN 121

Query: 430 QFQRWMATGVLGLSESGLKKL 492
           + +RW  TGV+GL+E  LK +
Sbjct: 122 RVERWKVTGVIGLAECNLKAI 142


>gb|ABK95593.1| unknown [Populus trichocarpa]
          Length = 371

 Score =  159 bits (401), Expect = 3e-37
 Identities = 84/141 (59%), Positives = 103/141 (73%), Gaps = 3/141 (2%)
 Frame = +1

Query: 79  ESSGEATMIKITVKFSGRSIPINLSLDSTIKHLKILLQPLTNVLPRGQKLIFSGKVLEDE 258
           E  G+ T I ITVKFSGRSIPI++SLDS IK +K LLQPLTNVLPRGQKLIF GK+L D 
Sbjct: 2   EVEGQDTAINITVKFSGRSIPISVSLDSKIKDVKSLLQPLTNVLPRGQKLIFKGKLLVDG 61

Query: 259 KTLRLSELKNGSKIMLIASQSLHQGDGPIKKEATEVPMSRRRPESNK---DRKPMAVQNN 429
            TLR SE+ NG+K+ML+ASQ LHQGDGPI K+A   P+SR    SNK   ++  +    N
Sbjct: 62  MTLRESEVTNGAKVMLMASQGLHQGDGPILKDAKTRPISRANTSSNKTVNEKIGVLFDKN 121

Query: 430 QFQRWMATGVLGLSESGLKKL 492
           + +RW  TGV+GL+E  LK +
Sbjct: 122 RVERWKVTGVIGLAECNLKAI 142


>ref|XP_004166686.1| PREDICTED: LRR repeats and ubiquitin-like domain-containing protein
           At2g30105-like [Cucumis sativus]
          Length = 367

 Score =  147 bits (371), Expect = 9e-34
 Identities = 77/131 (58%), Positives = 96/131 (73%), Gaps = 3/131 (2%)
 Frame = +1

Query: 103 IKITVKFSGRSIPINLSLDSTIKHLKILLQPLTNVLPRGQKLIFSGKVLEDEKTLRLSEL 282
           I I VKF+G+SIPI L  DST+K LK LLQPLTNVLPRGQKLIF GKVL DE TL  SE+
Sbjct: 6   ISINVKFTGKSIPITLPPDSTVKDLKSLLQPLTNVLPRGQKLIFKGKVLADEMTLAASEV 65

Query: 283 KNGSKIMLIASQSLHQGDGPIKKEATEVPMSRRRPESNK---DRKPMAVQNNQFQRWMAT 453
            NG+K+ML+ASQ LHQGDGPI +EA   P  R    ++K   +++ + V  ++F+RW AT
Sbjct: 66  ANGAKMMLMASQGLHQGDGPILREARTRPRERSVQNASKLVDEKQRVPVDKSRFERWKAT 125

Query: 454 GVLGLSESGLK 486
           GV+ LS+  LK
Sbjct: 126 GVIALSDCNLK 136


>ref|XP_004143220.1| PREDICTED: uncharacterized protein LOC101207176 [Cucumis sativus]
          Length = 1290

 Score =  147 bits (371), Expect = 9e-34
 Identities = 77/131 (58%), Positives = 96/131 (73%), Gaps = 3/131 (2%)
 Frame = +1

Query: 103  IKITVKFSGRSIPINLSLDSTIKHLKILLQPLTNVLPRGQKLIFSGKVLEDEKTLRLSEL 282
            I I VKF+G+SIPI L  DST+K LK LLQPLTNVLPRGQKLIF GKVL DE TL  SE+
Sbjct: 929  ISINVKFTGKSIPITLPPDSTVKDLKSLLQPLTNVLPRGQKLIFKGKVLADEMTLAASEV 988

Query: 283  KNGSKIMLIASQSLHQGDGPIKKEATEVPMSRRRPESNK---DRKPMAVQNNQFQRWMAT 453
             NG+K+ML+ASQ LHQGDGPI +EA   P  R    ++K   +++ + V  ++F+RW AT
Sbjct: 989  ANGAKMMLMASQGLHQGDGPILREARTRPRERSVQNASKLVDEKQRVPVDKSRFERWKAT 1048

Query: 454  GVLGLSESGLK 486
            GV+ LS+  LK
Sbjct: 1049 GVIALSDCNLK 1059


>ref|XP_002879249.1| ubiquitin family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297325088|gb|EFH55508.1| ubiquitin family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 900

 Score =  145 bits (365), Expect = 4e-33
 Identities = 75/145 (51%), Positives = 106/145 (73%), Gaps = 2/145 (1%)
 Frame = +1

Query: 64  VMEKDESSGEATMIKITVKFSGRSIPINLSLDSTIKHLKILLQPLTNVLPRGQKLIFSGK 243
           VME ++ +   + IK+TVKF G+SIP+++S D T+K LK LLQP+TNVLPRGQKLIF GK
Sbjct: 526 VMELEDPTMADSTIKLTVKFGGKSIPLSVSQDCTVKDLKSLLQPITNVLPRGQKLIFKGK 585

Query: 244 VLEDEKTLRLSELKNGSKIMLIASQSLHQGDGPIKKEATEVPMSRRRPESNKD-RKP-MA 417
           VL +  TL+ S++ +G+K+ML+ASQ LHQG+GP+ KEA+  P+SR       D RKP + 
Sbjct: 586 VLVETSTLKQSDVGSGAKLMLMASQGLHQGEGPVLKEASTRPISRTVVSDKVDQRKPSLL 645

Query: 418 VQNNQFQRWMATGVLGLSESGLKKL 492
           V   +  RW ATGV+ L+++ LK++
Sbjct: 646 VDKKRTDRWKATGVIALAQANLKEI 670


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