BLASTX nr result

ID: Cnidium21_contig00011586 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00011586
         (365 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003521095.1| PREDICTED: alpha-L-arabinofuranosidase 1-lik...   158   4e-37
ref|XP_003554088.1| PREDICTED: alpha-L-arabinofuranosidase 1-lik...   157   1e-36
ref|XP_002322586.1| predicted protein [Populus trichocarpa] gi|2...   155   4e-36
ref|XP_002884811.1| alpha-L-arabinofuranosidase [Arabidopsis lyr...   154   7e-36
ref|XP_002862405.1| predicted protein [Arabidopsis lyrata subsp....   154   7e-36

>ref|XP_003521095.1| PREDICTED: alpha-L-arabinofuranosidase 1-like [Glycine max]
          Length = 676

 Score =  158 bits (400), Expect = 4e-37
 Identities = 81/120 (67%), Positives = 89/120 (74%)
 Frame = -1

Query: 365 FSRANAFDRSSRSGPKAFVSEYAVTGKDAGQGSLLASLAEAGFLIGIEKNSDIVEMASYA 186
           FSRANAFD +SR+GPKAFVSEYAVTGKDAG GSLLA+LAEAGFLIG+EKNSD++      
Sbjct: 443 FSRANAFDHTSRNGPKAFVSEYAVTGKDAGTGSLLAALAEAGFLIGLEKNSDVI------ 496

Query: 185 XXXXXXXXXXXXXXXXXXVEMASYAPLFVNVNDRRWNPDAIVFNSAQAYGTPSYWMQHFF 6
                              +MASYAPLFVN NDRRWNPDAIVFNS Q YGTPSYW+Q FF
Sbjct: 497 -------------------QMASYAPLFVNANDRRWNPDAIVFNSFQLYGTPSYWVQVFF 537


>ref|XP_003554088.1| PREDICTED: alpha-L-arabinofuranosidase 1-like [Glycine max]
          Length = 676

 Score =  157 bits (396), Expect = 1e-36
 Identities = 80/120 (66%), Positives = 88/120 (73%)
 Frame = -1

Query: 365 FSRANAFDRSSRSGPKAFVSEYAVTGKDAGQGSLLASLAEAGFLIGIEKNSDIVEMASYA 186
           FSRAN FD +SR+GPKAFVSEYAVTGKDAG GSLLA+LAEAGFLIG+EKNSD++      
Sbjct: 443 FSRANTFDHTSRNGPKAFVSEYAVTGKDAGTGSLLAALAEAGFLIGLEKNSDVI------ 496

Query: 185 XXXXXXXXXXXXXXXXXXVEMASYAPLFVNVNDRRWNPDAIVFNSAQAYGTPSYWMQHFF 6
                              +MASYAPLFVN NDRRWNPDAIVFNS Q YGTPSYW+Q FF
Sbjct: 497 -------------------QMASYAPLFVNANDRRWNPDAIVFNSFQLYGTPSYWVQLFF 537


>ref|XP_002322586.1| predicted protein [Populus trichocarpa] gi|222867216|gb|EEF04347.1|
           predicted protein [Populus trichocarpa]
          Length = 193

 Score =  155 bits (391), Expect = 4e-36
 Identities = 80/121 (66%), Positives = 88/121 (72%)
 Frame = -1

Query: 365 FSRANAFDRSSRSGPKAFVSEYAVTGKDAGQGSLLASLAEAGFLIGIEKNSDIVEMASYA 186
           FS  + FDR+SR+GPKAFVSEYAVTGKDAG GSLLA+LAEAGFLIG+EKNSDIVE     
Sbjct: 66  FSMTHKFDRTSRTGPKAFVSEYAVTGKDAGTGSLLAALAEAGFLIGLEKNSDIVE----- 120

Query: 185 XXXXXXXXXXXXXXXXXXVEMASYAPLFVNVNDRRWNPDAIVFNSAQAYGTPSYWMQHFF 6
                               MASYAPLFVN NDRRWNPDAIVFNS+  YGTPSYW+Q FF
Sbjct: 121 --------------------MASYAPLFVNANDRRWNPDAIVFNSSMHYGTPSYWVQKFF 160

Query: 5   K 3
           +
Sbjct: 161 R 161


>ref|XP_002884811.1| alpha-L-arabinofuranosidase [Arabidopsis lyrata subsp. lyrata]
           gi|297330651|gb|EFH61070.1| alpha-L-arabinofuranosidase
           [Arabidopsis lyrata subsp. lyrata]
          Length = 676

 Score =  154 bits (389), Expect = 7e-36
 Identities = 81/120 (67%), Positives = 86/120 (71%)
 Frame = -1

Query: 365 FSRANAFDRSSRSGPKAFVSEYAVTGKDAGQGSLLASLAEAGFLIGIEKNSDIVEMASYA 186
           FS  + FDR+SRSGPKAFVSEYAVTGKDAG GSLLASLAEA FLIG+EKNSDIVE     
Sbjct: 443 FSMYHQFDRTSRSGPKAFVSEYAVTGKDAGTGSLLASLAEAAFLIGLEKNSDIVE----- 497

Query: 185 XXXXXXXXXXXXXXXXXXVEMASYAPLFVNVNDRRWNPDAIVFNSAQAYGTPSYWMQHFF 6
                               MASYAPLFVN NDRRWNPDAIVFNS+  YGTPSYW+Q FF
Sbjct: 498 --------------------MASYAPLFVNTNDRRWNPDAIVFNSSHLYGTPSYWVQRFF 537


>ref|XP_002862405.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297307892|gb|EFH38663.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 242

 Score =  154 bits (389), Expect = 7e-36
 Identities = 81/120 (67%), Positives = 86/120 (71%)
 Frame = -1

Query: 365 FSRANAFDRSSRSGPKAFVSEYAVTGKDAGQGSLLASLAEAGFLIGIEKNSDIVEMASYA 186
           FS  + FDR+SRSGPKAFVSEYAVTGKDAG GSLLASLAEA FLIG+EKNSDIVE     
Sbjct: 7   FSMYHQFDRTSRSGPKAFVSEYAVTGKDAGTGSLLASLAEAAFLIGLEKNSDIVE----- 61

Query: 185 XXXXXXXXXXXXXXXXXXVEMASYAPLFVNVNDRRWNPDAIVFNSAQAYGTPSYWMQHFF 6
                               MASYAPLFVN NDRRWNPDAIVFNS+  YGTPSYW+Q FF
Sbjct: 62  --------------------MASYAPLFVNTNDRRWNPDAIVFNSSHLYGTPSYWVQRFF 101


Top