BLASTX nr result

ID: Cnidium21_contig00011576 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00011576
         (262 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003518971.1| PREDICTED: uncharacterized protein LOC100776...   124   8e-27
ref|XP_002517284.1| conserved hypothetical protein [Ricinus comm...   111   7e-23
ref|XP_004173745.1| PREDICTED: probable mediator of RNA polymera...   110   1e-22
ref|XP_004136624.1| PREDICTED: probable mediator of RNA polymera...   110   1e-22
emb|CBI32806.3| unnamed protein product [Vitis vinifera]              109   3e-22

>ref|XP_003518971.1| PREDICTED: uncharacterized protein LOC100776128 [Glycine max]
          Length = 101

 Score =  124 bits (311), Expect = 8e-27
 Identities = 63/88 (71%), Positives = 72/88 (81%), Gaps = 1/88 (1%)
 Frame = +2

Query: 2   KLQQKPEKVAIQRPP-VTQQNKPRCSDEASVQVKLEATKRKLQERYQQAENAKRQRTIQV 178
           K+QQ   K AI R P + Q +KP+CSD+A+V VKLEATKRKLQERYQQAE AKRQRT+QV
Sbjct: 10  KMQQNIVKSAIPRNPHIHQLDKPKCSDDAAVHVKLEATKRKLQERYQQAEKAKRQRTVQV 69

Query: 179 MELHDLPKQDLGHKNFHGKPGNNHKRNW 262
           MELHDLPKQ +GH+N H KPG NHKR W
Sbjct: 70  MELHDLPKQGIGHRNPHVKPG-NHKRQW 96


>ref|XP_002517284.1| conserved hypothetical protein [Ricinus communis]
           gi|223543547|gb|EEF45077.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 473

 Score =  111 bits (277), Expect = 7e-23
 Identities = 59/88 (67%), Positives = 71/88 (80%), Gaps = 1/88 (1%)
 Frame = +2

Query: 2   KLQQKPEKVAIQRP-PVTQQNKPRCSDEASVQVKLEATKRKLQERYQQAENAKRQRTIQV 178
           K+Q+K +K+  QR  P  QQ+K +CSD+ +VQ KLEATKRKLQERYQQAENAKRQRTIQV
Sbjct: 379 KIQRKTDKLVTQRKLPGGQQDKFKCSDDDAVQKKLEATKRKLQERYQQAENAKRQRTIQV 438

Query: 179 MELHDLPKQDLGHKNFHGKPGNNHKRNW 262
           MELHDLPKQ L  KN + +PG +H R+W
Sbjct: 439 MELHDLPKQALVQKNPNMRPG-SHNRHW 465


>ref|XP_004173745.1| PREDICTED: probable mediator of RNA polymerase II transcription
           subunit 26b-like [Cucumis sativus]
          Length = 240

 Score =  110 bits (275), Expect = 1e-22
 Identities = 59/87 (67%), Positives = 66/87 (75%)
 Frame = +2

Query: 2   KLQQKPEKVAIQRPPVTQQNKPRCSDEASVQVKLEATKRKLQERYQQAENAKRQRTIQVM 181
           K Q+K EK  I  P   QQ+  +CSDE +VQVKLEATKRKLQE YQQAENAK+QRTIQVM
Sbjct: 152 KFQRKLEKPTI--PKRNQQDNFKCSDEVAVQVKLEATKRKLQESYQQAENAKKQRTIQVM 209

Query: 182 ELHDLPKQDLGHKNFHGKPGNNHKRNW 262
           ELHDLPKQ +GH+N H K G    RNW
Sbjct: 210 ELHDLPKQGIGHRNPHLKSG-GFNRNW 235


>ref|XP_004136624.1| PREDICTED: probable mediator of RNA polymerase II transcription
           subunit 26b-like [Cucumis sativus]
          Length = 452

 Score =  110 bits (275), Expect = 1e-22
 Identities = 59/87 (67%), Positives = 66/87 (75%)
 Frame = +2

Query: 2   KLQQKPEKVAIQRPPVTQQNKPRCSDEASVQVKLEATKRKLQERYQQAENAKRQRTIQVM 181
           K Q+K EK  I  P   QQ+  +CSDE +VQVKLEATKRKLQE YQQAENAK+QRTIQVM
Sbjct: 364 KFQRKLEKPTI--PKRNQQDNFKCSDEVAVQVKLEATKRKLQESYQQAENAKKQRTIQVM 421

Query: 182 ELHDLPKQDLGHKNFHGKPGNNHKRNW 262
           ELHDLPKQ +GH+N H K G    RNW
Sbjct: 422 ELHDLPKQGIGHRNPHLKSG-GFNRNW 447


>emb|CBI32806.3| unnamed protein product [Vitis vinifera]
          Length = 337

 Score =  109 bits (272), Expect = 3e-22
 Identities = 58/88 (65%), Positives = 69/88 (78%), Gaps = 1/88 (1%)
 Frame = +2

Query: 2   KLQQKPEKVAIQRPPVT-QQNKPRCSDEASVQVKLEATKRKLQERYQQAENAKRQRTIQV 178
           K  QK +K AI R PV  QQ+K + S+E ++QVKLEA KRKL ERYQQAE+AKRQRTIQV
Sbjct: 246 KFLQKSDKPAIHRKPVVGQQDKSKSSEEDTIQVKLEAAKRKLHERYQQAEDAKRQRTIQV 305

Query: 179 MELHDLPKQDLGHKNFHGKPGNNHKRNW 262
           MEL DLPKQ LGH+N H + GNN+ R+W
Sbjct: 306 MELQDLPKQGLGHRNPHIRHGNNN-RHW 332


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