BLASTX nr result

ID: Cnidium21_contig00011542 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00011542
         (1380 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADW66146.1| RING-H2 zinc finger protein [Solanum nigrum]           151   3e-34
ref|NP_001236683.1| uncharacterized protein LOC100305532 [Glycin...   143   9e-32
ref|XP_002533895.1| RING-H2 finger protein ATL3J, putative [Rici...   142   2e-31
emb|CAN82068.1| hypothetical protein VITISV_037474 [Vitis vinifera]   140   6e-31
ref|XP_002264718.1| PREDICTED: E3 ubiquitin-protein ligase RHA1B...   140   8e-31

>gb|ADW66146.1| RING-H2 zinc finger protein [Solanum nigrum]
          Length = 144

 Score =  151 bits (382), Expect = 3e-34
 Identities = 76/145 (52%), Positives = 95/145 (65%), Gaps = 1/145 (0%)
 Frame = +1

Query: 682  MGLSQYPGPADAGMLCIILVNTAKCIAMMKETVRFVLKTIGIDIVSWEEYNTTDXXXXXX 861
            MGLS Y  PADAG+ C+ILVNTA  I+++K  VR +L  IGI+  SWEEY+  +      
Sbjct: 1    MGLSPYTTPADAGVFCVILVNTATSISIVKGMVRSILHVIGINFASWEEYSI-EGPLDPF 59

Query: 862  XXXXXXXXXXIEEFRSRIPAMRYDSLCSKQLE-HDCSVCLTNFRPKAVINHLSCGHVFHQ 1038
                      +EEFRSR PA+RYDSLC   L   +C VCL +F   A INHLSCGHVFH+
Sbjct: 60   ECRGSPSGSYMEEFRSRTPAVRYDSLCISNLPTQECPVCLADFNHDAEINHLSCGHVFHK 119

Query: 1039 VCVEKWLKYRKVTCPNCRTNMIPQD 1113
            +C+EKWLK   VTCP CR  ++PQ+
Sbjct: 120  LCLEKWLKNWNVTCPLCRDYIMPQE 144


>ref|NP_001236683.1| uncharacterized protein LOC100305532 [Glycine max]
            gi|255625823|gb|ACU13256.1| unknown [Glycine max]
          Length = 154

 Score =  143 bits (361), Expect = 9e-32
 Identities = 71/150 (47%), Positives = 97/150 (64%), Gaps = 5/150 (3%)
 Frame = +1

Query: 682  MGLSQYPGPADAGMLCIILVNTAKCIAMMKETVRFVLKTIGIDI----VSWEEYNTTDXX 849
            MGLS  P P++ G+LC++LVNT   I++ K  VR +L  +GI +     S    + +   
Sbjct: 1    MGLSSLPAPSE-GVLCVLLVNTVLSISIFKGIVRTILHIVGIHLPSSSTSPSSPDPSQAA 59

Query: 850  XXXXXXXXXXXXXXIEEFRSRIPAMRYDSLC-SKQLEHDCSVCLTNFRPKAVINHLSCGH 1026
                          IEEFRSR P +R+DS+C SK+LEHDCSVCLT F P++ IN LSCGH
Sbjct: 60   PESFELHLSPSESYIEEFRSRTPTLRFDSVCCSKRLEHDCSVCLTQFEPESEINRLSCGH 119

Query: 1027 VFHQVCVEKWLKYRKVTCPNCRTNMIPQDE 1116
            +FH+VC+EKWL Y  +TCP CRT ++P+D+
Sbjct: 120  LFHKVCLEKWLDYWNITCPLCRTPLMPEDD 149


>ref|XP_002533895.1| RING-H2 finger protein ATL3J, putative [Ricinus communis]
            gi|223526146|gb|EEF28485.1| RING-H2 finger protein ATL3J,
            putative [Ricinus communis]
          Length = 156

 Score =  142 bits (359), Expect = 2e-31
 Identities = 75/153 (49%), Positives = 98/153 (64%), Gaps = 7/153 (4%)
 Frame = +1

Query: 682  MGLSQYPGPADAGMLCIILVNTAKCIAMMKETVRFVLKTIGIDIVSWE------EYNTTD 843
            MGLS  P P++ G+LC++LVNTA  I++ K  VR +L  +GI + S        +YN  +
Sbjct: 1    MGLSSLPAPSE-GVLCVLLVNTALSISIFKGIVRSILHIVGIRLSSSSSSTASSDYN--E 57

Query: 844  XXXXXXXXXXXXXXXXIEEFRSRIPAMRYDSLCS-KQLEHDCSVCLTNFRPKAVINHLSC 1020
                            I EFRSR PA R+DS+C  KQ+EHDCSVCLT F P++ IN LSC
Sbjct: 58   DPTDLFEFRLPPSESYINEFRSRTPATRFDSVCRCKQIEHDCSVCLTRFEPESEINCLSC 117

Query: 1021 GHVFHQVCVEKWLKYRKVTCPNCRTNMIPQDED 1119
            GH+FH+VC+EKWL Y  VTCP CR+ +IP +ED
Sbjct: 118  GHLFHKVCLEKWLDYWNVTCPLCRSPVIPSEED 150


>emb|CAN82068.1| hypothetical protein VITISV_037474 [Vitis vinifera]
          Length = 223

 Score =  140 bits (354), Expect = 6e-31
 Identities = 69/148 (46%), Positives = 98/148 (66%), Gaps = 2/148 (1%)
 Frame = +1

Query: 679  NMGLSQYPGPADAGMLCIILVNTAKCIAMMKETVRFVLKTIGIDIVSW-EEYNTTDXXXX 855
            +MGLS  P P++ G+LC++LVNTA  I++ K  VR +L  IGI + +     ++ +    
Sbjct: 72   SMGLSSLPAPSE-GVLCVLLVNTALSISIFKGIVRAILHVIGIHLSATPSSSDSPEPTSE 130

Query: 856  XXXXXXXXXXXXIEEFRSRIPAMRYDSLCS-KQLEHDCSVCLTNFRPKAVINHLSCGHVF 1032
                        +EEFRSR PA+R+D++CS K+ EHDC+VCLT F P + INHL CGH F
Sbjct: 131  PFEFRRNPSETCMEEFRSRNPAIRFDTVCSCKRPEHDCAVCLTRFEPDSEINHLPCGHFF 190

Query: 1033 HQVCVEKWLKYRKVTCPNCRTNMIPQDE 1116
            H+VC+EKWL Y  +TCP CRT ++P++E
Sbjct: 191  HKVCLEKWLDYWNITCPLCRTPLMPEEE 218


>ref|XP_002264718.1| PREDICTED: E3 ubiquitin-protein ligase RHA1B [Vitis vinifera]
          Length = 151

 Score =  140 bits (353), Expect = 8e-31
 Identities = 69/147 (46%), Positives = 97/147 (65%), Gaps = 2/147 (1%)
 Frame = +1

Query: 682  MGLSQYPGPADAGMLCIILVNTAKCIAMMKETVRFVLKTIGIDIVSW-EEYNTTDXXXXX 858
            MGLS  P P++ G+LC++LVNTA  I++ K  VR +L  IGI + +     ++ +     
Sbjct: 1    MGLSSLPAPSE-GVLCVLLVNTALSISIFKGIVRAILHVIGIHLSATPSSSDSPEPTSEP 59

Query: 859  XXXXXXXXXXXIEEFRSRIPAMRYDSLCS-KQLEHDCSVCLTNFRPKAVINHLSCGHVFH 1035
                       +EEFRSR PA+R+D++CS K+ EHDC+VCLT F P + INHL CGH FH
Sbjct: 60   FEFRRNPSETCMEEFRSRNPAIRFDTVCSCKRPEHDCAVCLTRFEPDSEINHLPCGHFFH 119

Query: 1036 QVCVEKWLKYRKVTCPNCRTNMIPQDE 1116
            +VC+EKWL Y  +TCP CRT ++P++E
Sbjct: 120  KVCLEKWLDYWNITCPLCRTPLMPEEE 146


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