BLASTX nr result

ID: Cnidium21_contig00011541 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00011541
         (734 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002530828.1| conserved hypothetical protein [Ricinus comm...   160   3e-37
ref|XP_002536610.1| conserved hypothetical protein [Ricinus comm...   154   1e-35
ref|YP_002608349.1| orf185 [Vitis vinifera] gi|209954145|emb|CAQ...   154   2e-35
ref|YP_005090367.1| orf186 (mitochondrion) [Phoenix dactylifera]...   139   5e-31
ref|YP_717101.1| hypothetical protein BrnapMp002 [Brassica napus...   133   4e-29

>ref|XP_002530828.1| conserved hypothetical protein [Ricinus communis]
           gi|223529592|gb|EEF31541.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 229

 Score =  160 bits (405), Expect = 3e-37
 Identities = 100/177 (56%), Positives = 116/177 (65%), Gaps = 4/177 (2%)
 Frame = +3

Query: 216 IFDTYFCSVPWISPAQVSVRLRMRTSFPSAHSPFTRFSKQRRKVGQEVPRALCPTHLSRS 395
           ++ TY    P    AQVSVRLRMRTSFP AHS FTRFSKQRRK GQ+VPRALCPTHLSRS
Sbjct: 30  VYSTYS---PVSHTAQVSVRLRMRTSFPFAHSLFTRFSKQRRKGGQKVPRALCPTHLSRS 86

Query: 396 KCSSPVPPNAP---NLSAKIV*VCSYASDASP*NKSTQFPFLFRCTRFISPIHKEGRGGK 566
           KCSSPVPPNAP     S +   +  +  D      S  FP     + +IS    +G+   
Sbjct: 87  KCSSPVPPNAPISRQRSCECAVMLRHRIDRP---SSCSFPV---HSLYIS--DTQGKTWW 138

Query: 567 EAALASVRPIIPLASRIHAP-PLTAARGCSCRYISLSGSLAPLVISFYDMLLSSPYS 734
           E +  S+ P+   A  +H+   LT ARGCSCRY+SLSGSLAP VISFYDMLLS PYS
Sbjct: 139 EGSSPSLCPVDHSAGILHSRLHLTTARGCSCRYVSLSGSLAPPVISFYDMLLSLPYS 195


>ref|XP_002536610.1| conserved hypothetical protein [Ricinus communis]
           gi|223519108|gb|EEF25773.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 184

 Score =  154 bits (390), Expect = 1e-35
 Identities = 93/155 (60%), Positives = 104/155 (67%), Gaps = 4/155 (2%)
 Frame = +3

Query: 282 MRTSFPSAHSPFTRFSKQRRKVGQEVPRALCPTHLSRSKCSSPVPPNAP---NLSAKIV* 452
           MRTSFPSAHSPFTRFSKQRRK GQ+VPRALCPTHLSRSKCSSPVPPNAP     S +   
Sbjct: 1   MRTSFPSAHSPFTRFSKQRRKGGQKVPRALCPTHLSRSKCSSPVPPNAPISRQRSCECAV 60

Query: 453 VCSYASDASP*NKSTQFPFLFRCTRFISPIHKEGRGGKEAALASVRPIIPLASRIHAP-P 629
           +            S  FP     + +IS    +GR   E +  S+ P    A  +H+   
Sbjct: 61  MLRMLRHRIDRPSSRSFPV---HSLYIS--DTQGRTRWEGSSPSLCPADHSAGILHSRLR 115

Query: 630 LTAARGCSCRYISLSGSLAPLVISFYDMLLSSPYS 734
           LTAARGCSCRY+SLSGSLAP VISFYDMLLSSPYS
Sbjct: 116 LTAARGCSCRYVSLSGSLAPPVISFYDMLLSSPYS 150


>ref|YP_002608349.1| orf185 [Vitis vinifera] gi|209954145|emb|CAQ77575.1| orf185 [Vitis
           vinifera] gi|239764756|gb|ACS15226.1| ORF185 [Vitis
           vinifera]
          Length = 184

 Score =  154 bits (389), Expect = 2e-35
 Identities = 93/155 (60%), Positives = 103/155 (66%), Gaps = 4/155 (2%)
 Frame = +3

Query: 282 MRTSFPSAHSPFTRFSKQRRKVGQEVPRALCPTHLSRSKCSSPVPPNAP---NLSAKIV* 452
           MRTSFPSAHSPFTRFSKQR K GQ+VPRALCPTHLSRSKCSSPVPPNAP     S +   
Sbjct: 1   MRTSFPSAHSPFTRFSKQRGKGGQQVPRALCPTHLSRSKCSSPVPPNAPISRQRSCECAV 60

Query: 453 VCSYASDASP*NKSTQFPFLFRCTRFISPIHKEGRGGKEAALASVRPIIPLASRIHA-PP 629
           +            S  FP     + +IS    +GR   E +  S+ P    A   H+ P 
Sbjct: 61  MLRMLRHRIDRPSSRSFPV---HSLYIS--DTQGRTRWEGSSPSLCPADHSAGISHSRPR 115

Query: 630 LTAARGCSCRYISLSGSLAPLVISFYDMLLSSPYS 734
           LTAARGCSCRY+SLSGSLAP VISFYDMLLSSPYS
Sbjct: 116 LTAARGCSCRYVSLSGSLAPPVISFYDMLLSSPYS 150


>ref|YP_005090367.1| orf186 (mitochondrion) [Phoenix dactylifera]
           gi|343478422|gb|AEM43910.1| orf186 (mitochondrion)
           [Phoenix dactylifera]
          Length = 185

 Score =  139 bits (351), Expect = 5e-31
 Identities = 90/156 (57%), Positives = 101/156 (64%), Gaps = 6/156 (3%)
 Frame = +3

Query: 282 MRTSFP--SAHSPFTRFSKQRRKVGQEVPRALCPTHLSRSKCSSPVPPNAP---NLSAKI 446
           MRTSFP  SAHSPFTR SK RRK GQ+VPRALCPTHLSRSKCSSPVPPNAP     S + 
Sbjct: 1   MRTSFPFASAHSPFTRLSK-RRKGGQQVPRALCPTHLSRSKCSSPVPPNAPISRQRSCEC 59

Query: 447 V*VCSYASDASP*NKSTQFPFLFRCTRFISPIHKEGRGGKEAALASVRPIIPLASRIHAP 626
             +            S  FP     + +IS    +GR   E +  S+ P    A  +H+ 
Sbjct: 60  AVMLRMLRHGIDRLSSRSFPV---HSLYIS--DTQGRTRWEGSSPSLCPADHSAGILHSR 114

Query: 627 -PLTAARGCSCRYISLSGSLAPLVISFYDMLLSSPY 731
             LTAARGCSCRY+SLSGSLAP VISFYDMLLSSPY
Sbjct: 115 LRLTAARGCSCRYVSLSGSLAPPVISFYDMLLSSPY 150


>ref|YP_717101.1| hypothetical protein BrnapMp002 [Brassica napus]
           gi|353526430|ref|YP_004927502.1| orf120 (mitochondrion)
           [Brassica oleracea] gi|353526492|ref|YP_004927563.1|
           orf120 (mitochondrion) [Brassica carinata]
           gi|353526654|ref|YP_004927821.1| orf120 (mitochondrion)
           [Brassica rapa subsp. campestris]
           gi|353531338|ref|YP_004927724.1| orf120 (mitochondrion)
           [Brassica juncea] gi|37591047|dbj|BAC98849.1|
           hypothetical protein [Brassica napus]
           gi|335354842|gb|AEH43398.1| orf120 [Brassica rapa subsp.
           campestris] gi|335354975|gb|AEH43530.1| orf120 [Brassica
           oleracea] gi|335355023|gb|AEH43577.1| orf120 [Brassica
           carinata] gi|335355071|gb|AEH43624.1| orf120 [Brassica
           juncea] gi|339511267|emb|CBX48322.1| unnamed protein
           product [Brassica napus]
          Length = 120

 Score =  133 bits (334), Expect = 4e-29
 Identities = 73/117 (62%), Positives = 83/117 (70%), Gaps = 1/117 (0%)
 Frame = -2

Query: 616 MRDASGMIGRTEARAASFPPRPSLCI-GDIKRVHRKRKGNWVDLFYGEASEA*LHTHTIF 440
           M+DASGMIGRTEARA    P  S  +    K    ++ GNWVDL     S    H+H + 
Sbjct: 1   MQDASGMIGRTEARAKEPLPTASFPVYRRYKASAPEKNGNWVDLLRSIRSIT-AHSHNLC 59

Query: 439 AERLGAFGGTGELHLLLDRCVGQRARGTSCPTFLLCFENRVNGEWAEGKEVLIRSRT 269
            E +GAFGGTGELHLLLDRCVGQRARGT CP FLLCFEN VNGEWAEGKEVLI+ ++
Sbjct: 60  RE-IGAFGGTGELHLLLDRCVGQRARGTFCPPFLLCFENCVNGEWAEGKEVLIQRKS 115


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