BLASTX nr result

ID: Cnidium21_contig00011538 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00011538
         (375 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272905.2| PREDICTED: F-box protein SKIP17 [Vitis vinif...    58   7e-07
emb|CBI28700.3| unnamed protein product [Vitis vinifera]               58   7e-07
emb|CAN61447.1| hypothetical protein VITISV_024140 [Vitis vinifera]    58   7e-07
ref|XP_002300839.1| f-box family protein [Populus trichocarpa] g...    56   3e-06

>ref|XP_002272905.2| PREDICTED: F-box protein SKIP17 [Vitis vinifera]
          Length = 486

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 26/41 (63%), Positives = 36/41 (87%)
 Frame = -1

Query: 123 FDRLIESSASDCEENMMIERAIRLGSVLLEAGKRSARKRGS 1
           F++L++S A D ++N++I+RA+RLGS LLEAGKRSARKR S
Sbjct: 62  FEKLLDSRACDSDQNLLIDRALRLGSALLEAGKRSARKRAS 102


>emb|CBI28700.3| unnamed protein product [Vitis vinifera]
          Length = 532

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 26/41 (63%), Positives = 36/41 (87%)
 Frame = -1

Query: 123 FDRLIESSASDCEENMMIERAIRLGSVLLEAGKRSARKRGS 1
           F++L++S A D ++N++I+RA+RLGS LLEAGKRSARKR S
Sbjct: 62  FEKLLDSRACDSDQNLLIDRALRLGSALLEAGKRSARKRAS 102


>emb|CAN61447.1| hypothetical protein VITISV_024140 [Vitis vinifera]
          Length = 603

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 26/41 (63%), Positives = 36/41 (87%)
 Frame = -1

Query: 123 FDRLIESSASDCEENMMIERAIRLGSVLLEAGKRSARKRGS 1
           F++L++S A D ++N++I+RA+RLGS LLEAGKRSARKR S
Sbjct: 62  FEKLLDSRACDSDQNLLIDRALRLGSALLEAGKRSARKRAS 102


>ref|XP_002300839.1| f-box family protein [Populus trichocarpa]
           gi|222842565|gb|EEE80112.1| f-box family protein
           [Populus trichocarpa]
          Length = 471

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 25/41 (60%), Positives = 36/41 (87%)
 Frame = -1

Query: 123 FDRLIESSASDCEENMMIERAIRLGSVLLEAGKRSARKRGS 1
           F+ L+ESS  D +++++I+RA++LGS+LLEAGKRSARKR S
Sbjct: 46  FEHLLESSPCDADKSLLIDRALKLGSLLLEAGKRSARKRSS 86


Top