BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00011504
         (3035 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003596218.1| F-box family protein [Medicago truncatula] g...   109   5e-21
ref|XP_002876582.1| hypothetical protein ARALYDRAFT_486551 [Arab...   100   2e-18
ref|XP_003543276.1| PREDICTED: uncharacterized protein LOC100795...    94   3e-16
gb|AAF14684.1|AC011713_32 Contains PF|00646 F-box domain. ESTs g...    88   1e-14
ref|NP_178211.3| F-box protein [Arabidopsis thaliana] gi|4257220...    88   1e-14

>ref|XP_003596218.1| F-box family protein [Medicago truncatula]
            gi|355485266|gb|AES66469.1| F-box family protein
            [Medicago truncatula]
          Length = 344

 Score =  109 bits (272), Expect = 5e-21
 Identities = 92/326 (28%), Positives = 150/326 (46%), Gaps = 22/326 (6%)
 Frame = -3

Query: 1719 KKEIDISNFLPEAVFSNIISWLPVKEAVRTSVLVKRWKHAWKYVTRLDLDPENLSKPNVE 1540
            ++E+D+ +  P+ +  +II  LP  E VRTSVL KRW+  WK    L  D   + K  +E
Sbjct: 14   EEEVDLISSFPDELLGSIICLLPYMEVVRTSVLSKRWESLWKNTPDLSFDQRQMLKSLIE 73

Query: 1539 PGRRDSRKG--------KKVTPTRRSRAD-LERCTRSYTSIIQSIQDTVTYCGIVHFPIN 1387
               ++S+          +KV P      D +       TS I S    +  C I H P +
Sbjct: 74   DYIQNSQLADRLTMAMERKVAPKNEEYFDVITEAAMMITSNIDSHIGPLKSCTIRHLPES 133

Query: 1386 IIRGDLNKWVKELLRKKKVKAL----SLKCYEKSITDGYVK----PLVLPAGIFSPLECL 1231
                D+  W+++L+ K+ +K      S       I D  VK     + LP  +FS  + L
Sbjct: 134  CASADVVGWLRKLMEKRVIKVSIERESCDYRNGGILDRDVKLAASTIDLPFEVFSNFKVL 193

Query: 1230 ELTCYRLFNTSPFRSCEQ-LRXXXXXXXXXXXXSITEIFSFCKSLEELSLIDCHGF-SKL 1057
            EL  YR FNT+P    EQ L+            +  +I S+C SLE L++ +C     +L
Sbjct: 194  ELKNYR-FNTTPSPYSEQTLKTLTLNKVRIILNTFHDILSYCSSLENLTVENCDFLRDEL 252

Query: 1056 EISSRNLKFLELQCLVIYNINISAEALTTLILYKISCRWSSVVIDAPRVTELQVNCSVEG 877
            +I S +LK++++  + +  I +SA  +  + +  I CR   +V +AP++  L+     + 
Sbjct: 253  KIVSPSLKYIKICNMNVLRILVSAFNVEVIEVDSIICRHQDLVFEAPKLQVLRAYNDFQI 312

Query: 876  ASQ---EHREMYLSQEKLLERCTGFL 808
              Q    H    L+   ++E C G L
Sbjct: 313  HGQIVFIHGRKLLTARDIIEICGGIL 338


>ref|XP_002876582.1| hypothetical protein ARALYDRAFT_486551 [Arabidopsis lyrata subsp.
            lyrata] gi|297322420|gb|EFH52841.1| hypothetical protein
            ARALYDRAFT_486551 [Arabidopsis lyrata subsp. lyrata]
          Length = 494

 Score =  100 bits (250), Expect = 2e-18
 Identities = 81/273 (29%), Positives = 127/273 (46%), Gaps = 6/273 (2%)
 Frame = -3

Query: 1710 IDISNFLPEAVFSNIISWLPVKEAVRTSVLVKRWKHAWKYVTRLDLDPENLSKPNVEPGR 1531
            ID  + LP+ +   I+S L  K+AV+TS L KRW   WK+   L +   N+S+ N     
Sbjct: 54   IDRISMLPDELLQKILSTLSTKDAVKTSTLSKRWVDQWKWRPHLSVGMRNISRTN----- 108

Query: 1530 RDSRKGKKVTPTRRSRADLERCTRSYTSIIQSIQDTVTYCGIVHFPINIIRGDLNKWVKE 1351
                      PT R R    R   S T  I + +  +  C I H       G L++WV+ 
Sbjct: 109  ----------PTSRLREISLRVAESMTRTINNHRGRLESCTISHILFQCKDGTLDRWVQT 158

Query: 1350 LLRKKKVKALSLKCYEKSI--TDGYVKPLVLPAGIFSP-LECLELTCYRLFNTSPFRSCE 1180
            +  +K+ K L+L  Y   +    GY +  + P+    P L  L LT Y+L  T+ F +C 
Sbjct: 159  VTHEKQTKELTLVNYIGCMGPFGGYNRLYLSPSTFSHPSLTSLSLTRYKLTETA-FNNCS 217

Query: 1179 QLRXXXXXXXXXXXXSITEIFSFCKSLEELSL-IDCHGFS-KLEISSRNLKFLELQCLVI 1006
             L+             ++ +F  C SLE L L I C      L+I ++NL+ L++ C  +
Sbjct: 218  NLKTLKLFDIMSDVSVLSRVFKACSSLEVLVLQITCLKLGCVLKIENKNLEVLQVTCPTL 277

Query: 1005 YN-INISAEALTTLILYKISCRWSSVVIDAPRV 910
             N + ++A  L  L +  I C   S ++DAP++
Sbjct: 278  INKMEVNAPRLEILDIKYIYC--DSFLLDAPKI 308


>ref|XP_003543276.1| PREDICTED: uncharacterized protein LOC100795538 [Glycine max]
          Length = 295

 Score = 93.6 bits (231), Expect = 3e-16
 Identities = 76/273 (27%), Positives = 127/273 (46%), Gaps = 12/273 (4%)
 Frame = -3

Query: 1122 IFSFCKSLEELSLID-----CHGFSKLEISSRNLKFLELQCLVIYNINISAEALTTLILY 958
            I S C  LE L+L +     C    ++ I+S  LKFL +  + +    +SA  L    + 
Sbjct: 11   ILSCCLCLENLTLENVTHDNCKLMREVTINSPRLKFLRICRMQMNGFKVSAVNLEVFEID 70

Query: 957  KISCRWSSVV-IDAPRVTELQVNCSVEGASQEHREMYLSQEKLLERCTGFLSCRERSHPL 781
             + C    ++  + P+V  L+    ++   Q    +     KLL+     L    +SH  
Sbjct: 71   TVVCMPKRLLTFEIPKVHLLRSRSDLKIRGQY---ICWVGSKLLQS-RNILHTSSQSHQG 126

Query: 780  YSSQVGCVSTFHNLQELSTSLDLNDIRHAILLSYIFQVCSQLKRLDITVEVRDPCKVGNL 601
             +S    +  F NL  L    DL  +++AI L    + C +L+ L+I  E+ D       
Sbjct: 127  TTSSFAGI--FENLATLCIDFDLKTVKNAITLFSALKACPKLQNLEINSEINDNAVD--- 181

Query: 600  YYPEH------LFWEKKESFDCISNCLRAVLIQNFRGEVLEMEFVRYVITKAPRMHRVTV 439
            YY +H       ++ +KE  +CI   L+ + I  F G+  E+EF++YVIT    M ++T+
Sbjct: 182  YYDQHDEDDAMEYYRRKEPCECIDQQLKTLSIMGFAGKKTEVEFLKYVITNGEVMKKITI 241

Query: 438  RCADDCSAEEVTATRNLLSFPRSSMDVSVVIEP 340
               DDCS      T  LLSF  +S ++S+++ P
Sbjct: 242  WFVDDCSWIHAAETGCLLSFQTASPNLSIILNP 274


>gb|AAF14684.1|AC011713_32 Contains PF|00646 F-box domain. ESTs gb|AA586135, gb|Z26675,
            gb|AI993239 and gb|AA585907 come from this gene
            [Arabidopsis thaliana]
          Length = 478

 Score = 88.2 bits (217), Expect = 1e-14
 Identities = 108/439 (24%), Positives = 183/439 (41%), Gaps = 12/439 (2%)
 Frame = -3

Query: 1716 KEIDISNFLPEAVFSNIISWLPVKEAVRTSVLVKRWKHAWKYVTRLDLDPENLSKPNVEP 1537
            K +D  + LP+ V   I+S L  +EA+RTSV+ KRW+H W  ++ L  D           
Sbjct: 39   KNVDWISKLPDDVLLIILSRLSTEEAIRTSVVSKRWEHVWNQMSHLVFDMR--------- 89

Query: 1536 GRRDSRKGKKVTPTRRSRADLERCTRSYTSIIQSIQDTVTYCGIVHFPINIIRGDLNKWV 1357
                    K +  +  +           T +I + +  +  C I+H P     G LN W+
Sbjct: 90   --------KNIINSNNTLDGSNPVATLITQVINNHRGHLESCVIIHVPYQGGNGMLNSWI 141

Query: 1356 KELLRKKKVKALSLKCYEKSITDGYVKPL-VLPAGIFSP-LECLELTCYRLFNTSPFRSC 1183
            + L   K+ K L+L+ Y     D   K     P  +  P L  L L  Y L ++ P R+C
Sbjct: 142  RLLSCVKRTKVLTLR-YHYGTWDRKFKTFNFSPDSLSHPSLMSLSLHSYFLESSHPLRNC 200

Query: 1182 EQLRXXXXXXXXXXXXSI-TEIFSFCKSLEELSL-IDCHGFSK--LEISSRNLKFLELQC 1015
              LR             +   + + C  LE L L I C   S+  L+I ++ LK L++  
Sbjct: 201  SNLRTLKLLSIVAPEIGVFNRVLASCPCLEVLVLGICCFKKSRVPLKIENKKLKLLQVSS 260

Query: 1014 LV-IYNINISAEALTTLILYKISCRWSSVVIDAPRVTELQVNCSVEGASQEHREMYLSQE 838
            L  I  I +S  +L  L +  I CR   + + +P++ +   N  V G    H    +S+E
Sbjct: 261  LERIDAIEVSTTSLDILAIIDICCRRDDLSLQSPQL-QFNRNFWVLGPYVPHISYNISEE 319

Query: 837  KLLERCTGFLSCRERSHPLYSSQVGCVSTFHNLQ-ELSTSLDLNDIRHAILLSYIFQVCS 661
            K +          E  + +Y      +  F NL   LS S+DL +      L  +  + +
Sbjct: 320  KSIGN-------EEFVNTIYGE---LLRPFANLYVALSVSVDLMNPTEVERLRQVLGLWT 369

Query: 660  -QLKRLDITVEVRDPCKVGNLYYPEHLFWE---KKESFDCISNCLRAVLIQNFRGEVLEM 493
             ++  L+I  +  +  +  N  + + L WE   KK+ F      +  V + NF G   E 
Sbjct: 370  RKILELEIIFKDNNGPREENKSWDKKL-WEDNNKKDPFPNAKFRVDTVWMYNFSGSEEEF 428

Query: 492  EFVRYVITKAPRMHRVTVR 436
              +  +I +   + ++ ++
Sbjct: 429  ALMTCLIRQGTVVEKMMIK 447


>ref|NP_178211.3| F-box protein [Arabidopsis thaliana] gi|42572207|ref|NP_974194.1|
            F-box protein [Arabidopsis thaliana]
            gi|334302906|sp|Q9SAG4.3|FB93_ARATH RecName: Full=F-box
            protein At1g80960 gi|145651794|gb|ABP88122.1| At1g80960
            [Arabidopsis thaliana] gi|332198351|gb|AEE36472.1| F-box
            protein [Arabidopsis thaliana]
            gi|332198352|gb|AEE36473.1| F-box protein [Arabidopsis
            thaliana]
          Length = 486

 Score = 88.2 bits (217), Expect = 1e-14
 Identities = 108/439 (24%), Positives = 183/439 (41%), Gaps = 12/439 (2%)
 Frame = -3

Query: 1716 KEIDISNFLPEAVFSNIISWLPVKEAVRTSVLVKRWKHAWKYVTRLDLDPENLSKPNVEP 1537
            K +D  + LP+ V   I+S L  +EA+RTSV+ KRW+H W  ++ L  D           
Sbjct: 47   KNVDWISKLPDDVLLIILSRLSTEEAIRTSVVSKRWEHVWNQMSHLVFDMR--------- 97

Query: 1536 GRRDSRKGKKVTPTRRSRADLERCTRSYTSIIQSIQDTVTYCGIVHFPINIIRGDLNKWV 1357
                    K +  +  +           T +I + +  +  C I+H P     G LN W+
Sbjct: 98   --------KNIINSNNTLDGSNPVATLITQVINNHRGHLESCVIIHVPYQGGNGMLNSWI 149

Query: 1356 KELLRKKKVKALSLKCYEKSITDGYVKPL-VLPAGIFSP-LECLELTCYRLFNTSPFRSC 1183
            + L   K+ K L+L+ Y     D   K     P  +  P L  L L  Y L ++ P R+C
Sbjct: 150  RLLSCVKRTKVLTLR-YHYGTWDRKFKTFNFSPDSLSHPSLMSLSLHSYFLESSHPLRNC 208

Query: 1182 EQLRXXXXXXXXXXXXSI-TEIFSFCKSLEELSL-IDCHGFSK--LEISSRNLKFLELQC 1015
              LR             +   + + C  LE L L I C   S+  L+I ++ LK L++  
Sbjct: 209  SNLRTLKLLSIVAPEIGVFNRVLASCPCLEVLVLGICCFKKSRVPLKIENKKLKLLQVSS 268

Query: 1014 LV-IYNINISAEALTTLILYKISCRWSSVVIDAPRVTELQVNCSVEGASQEHREMYLSQE 838
            L  I  I +S  +L  L +  I CR   + + +P++ +   N  V G    H    +S+E
Sbjct: 269  LERIDAIEVSTTSLDILAIIDICCRRDDLSLQSPQL-QFNRNFWVLGPYVPHISYNISEE 327

Query: 837  KLLERCTGFLSCRERSHPLYSSQVGCVSTFHNLQ-ELSTSLDLNDIRHAILLSYIFQVCS 661
            K +          E  + +Y      +  F NL   LS S+DL +      L  +  + +
Sbjct: 328  KSIGN-------EEFVNTIYGE---LLRPFANLYVALSVSVDLMNPTEVERLRQVLGLWT 377

Query: 660  -QLKRLDITVEVRDPCKVGNLYYPEHLFWE---KKESFDCISNCLRAVLIQNFRGEVLEM 493
             ++  L+I  +  +  +  N  + + L WE   KK+ F      +  V + NF G   E 
Sbjct: 378  RKILELEIIFKDNNGPREENKSWDKKL-WEDNNKKDPFPNAKFRVDTVWMYNFSGSEEEF 436

Query: 492  EFVRYVITKAPRMHRVTVR 436
              +  +I +   + ++ ++
Sbjct: 437  ALMTCLIRQGTVVEKMMIK 455