BLASTX nr result

ID: Cnidium21_contig00011456 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00011456
         (1424 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532732.1| RNA binding protein, putative [Ricinus commu...   263   8e-87
ref|XP_002273770.2| PREDICTED: uncharacterized protein LOC100264...   253   4e-84
emb|CAN80553.1| hypothetical protein VITISV_024360 [Vitis vinifera]   253   5e-83
ref|XP_003532266.1| PREDICTED: putative G3BP-like protein-like [...   226   2e-73
ref|XP_003551349.1| PREDICTED: putative G3BP-like protein-like [...   222   8e-73

>ref|XP_002532732.1| RNA binding protein, putative [Ricinus communis]
            gi|223527509|gb|EEF29634.1| RNA binding protein, putative
            [Ricinus communis]
          Length = 478

 Score =  263 bits (671), Expect(2) = 8e-87
 Identities = 161/328 (49%), Positives = 200/328 (60%), Gaps = 7/328 (2%)
 Frame = -3

Query: 1419 MSITTTMTAINEKILSLNYGEFRAEIKSVDAQESLNNGVHVLVTGYLTGKDNVVRDFTQS 1240
            MS TTTM AINEKILSL YG+FRAEI +VD+QES N GV VLVTGYL G DN+ + FTQS
Sbjct: 57   MSTTTTMHAINEKILSLGYGKFRAEISTVDSQESFNGGVLVLVTGYLNGNDNLRQKFTQS 116

Query: 1239 FFLAPQERGGYYVLNDMFRYLEKANQTCANQVLNXXXXXXXXXXXXXXXVQEDHVTEQSD 1060
            FFLAPQ+ G Y+VLND+FRY++ ANQ   N  +                 QE+H++EQ  
Sbjct: 117  FFLAPQDNG-YFVLNDVFRYVDDANQQNENLNVVNIVEAPVAAEQDSAYEQENHISEQPA 175

Query: 1059 ALALEANEEVVHNVSENGEIKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 880
            AL+ EANEE V + SEN ++                                        
Sbjct: 176  ALSDEANEEEVCDPSENEDVSIEEDET--------------------------------- 202

Query: 879  XELPVQEVIKNLPN-----NSNVVGESNIKSEELPKKSYASIVKDLKEKGLPFSSPAPVL 715
               PV EV+  +P      +S +  ES  K EELPKKSYASIVK +KE  +PFSSPAP  
Sbjct: 203  ---PVPEVVDEVPEVLEMADSQIAAESISKVEELPKKSYASIVKVMKENVVPFSSPAPSP 259

Query: 714  RKTPQKSREQQVKP-TPPASSNTYVSASILNAAENVN-QDLESDGYSIYIKGLPYNATPS 541
             ++  KS+EQ     TP  +S T+VS S  NA EN N Q+ E+DG SIY+KGLP +ATPS
Sbjct: 260  IRSAPKSQEQVTAAVTPVVTSETHVSTS--NATENANAQESEADGPSIYVKGLPLDATPS 317

Query: 540  LLEDEFKKYGTIKNGGIQVRSKQGFCFG 457
            LLE+EFKK+G+I+ GGIQVR ++GFCFG
Sbjct: 318  LLENEFKKFGSIRAGGIQVRCQKGFCFG 345



 Score = 85.9 bits (211), Expect(2) = 8e-87
 Identities = 50/120 (41%), Positives = 69/120 (57%)
 Frame = -2

Query: 367 ASAVQNAIEASPILLGGRKVIVEEKKSTNSGVNSRGRFPYGRAANYRNDSGYRNEXXXXX 188
           ASAVQ+AIEASPI++ G +V+VEEK+ST+ G N RGRF  G  A      GYRNE     
Sbjct: 352 ASAVQSAIEASPIMIHGCRVVVEEKRSTSRG-NHRGRFSSGAGA------GYRNEGARGR 404

Query: 187 XXXXXXXXXXXXXXXGKTEFSNRGNYRGGSTNNINNEYQRDESLGTSGGRMTRANGMLGN 8
                           +TE+ NR   RGG +N   + ++R + +G +GGR +RA+G+  N
Sbjct: 405 GNFGGARAYGRGDFSNRTEYGNRNGNRGGFSNRGGDGFRRADKMGNNGGRASRASGLTLN 464


>ref|XP_002273770.2| PREDICTED: uncharacterized protein LOC100264206 [Vitis vinifera]
            gi|296084617|emb|CBI25667.3| unnamed protein product
            [Vitis vinifera]
          Length = 466

 Score =  253 bits (646), Expect(2) = 4e-84
 Identities = 159/326 (48%), Positives = 193/326 (59%), Gaps = 5/326 (1%)
 Frame = -3

Query: 1419 MSITTTMTAINEKILSLNYGEFRAEIKSVDAQESLNNGVHVLVTGYLTGKDNVVRDFTQS 1240
            M +TTTM AINEKILSLNYG+  AEIKSVDAQES   GV VLVTGYLTGKDN  RDFTQS
Sbjct: 54   MGVTTTMEAINEKILSLNYGDLIAEIKSVDAQESFGGGVLVLVTGYLTGKDNRSRDFTQS 113

Query: 1239 FFLAPQERGGYYVLNDMFRYLEKANQTCANQVLNXXXXXXXXXXXXXXXVQEDHVTEQSD 1060
            FFLAPQ++ GY+VLND+FRY+E       N  L                VQE+H+ E + 
Sbjct: 114  FFLAPQDK-GYFVLNDLFRYIEDVKYQDGNPGLVSEVEAPLTPEQDPSPVQENHILEPTP 172

Query: 1059 ALALEANEEVVHNVSENGEIKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 880
             +  E NEE V+N SENGE                                         
Sbjct: 173  EVPEEVNEE-VYNPSENGEAS------------------------------------VEE 195

Query: 879  XELPVQEVIKNLPNNSNVVGESNIKSEELPKKSYASIVKDLKEKGLPFSSPAPVLRKTPQ 700
             E PV EV+  +  +  +V  S+ K  E+PKKSYASIVK +KE  +PFSSP P+  +   
Sbjct: 196  EEAPVAEVVDEI-QDDQMVTISDSKILEVPKKSYASIVKVMKESSVPFSSPTPIPPRPVP 254

Query: 699  KSREQQVK----PTPPASSNTYVSASILNAAENVNQDLESDGYSIYIKGLPYNATPSLLE 532
            K +EQQV     PTP A +N   + +        NQ+ E+DG+SIYI+GLP NATP+LLE
Sbjct: 255  KIQEQQVTVAPLPTPGAEANAIENGN--------NQEGEADGHSIYIRGLPSNATPALLE 306

Query: 531  DEFKKYGTIKNGGIQVRS-KQGFCFG 457
            DEFKK+G IK+GG+QVRS KQGFCFG
Sbjct: 307  DEFKKFGPIKSGGVQVRSNKQGFCFG 332



 Score = 86.7 bits (213), Expect(2) = 4e-84
 Identities = 52/121 (42%), Positives = 71/121 (58%), Gaps = 1/121 (0%)
 Frame = -2

Query: 367 ASAVQNAIEASPILLGGRKVIVEEKKSTNSG-VNSRGRFPYGRAANYRNDSGYRNEXXXX 191
           ASAVQ+A+EASPI +GGR+  VEEK+STNS  VN+R RF  GR   +RN+ G        
Sbjct: 339 ASAVQSAMEASPITIGGRQAFVEEKRSTNSSRVNNRTRFSNGRGVVFRNEGG------RG 392

Query: 190 XXXXXXXXXXXXXXXXGKTEFSNRGNYRGGSTNNINNEYQRDESLGTSGGRMTRANGMLG 11
                            ++EF NRG+ RGG  N   + YQR + +G++GGR+ RA+G+  
Sbjct: 393 RGNYGGNRGYNRGDFNSRSEFGNRGS-RGGFPNRGGDGYQRTDHVGSNGGRVNRASGLTV 451

Query: 10  N 8
           N
Sbjct: 452 N 452


>emb|CAN80553.1| hypothetical protein VITISV_024360 [Vitis vinifera]
          Length = 524

 Score =  253 bits (647), Expect(2) = 5e-83
 Identities = 160/326 (49%), Positives = 192/326 (58%), Gaps = 5/326 (1%)
 Frame = -3

Query: 1419 MSITTTMTAINEKILSLNYGEFRAEIKSVDAQESLNNGVHVLVTGYLTGKDNVVRDFTQS 1240
            M +TTTM AINEKILSLNYG+  AEIKSVDAQES   GV VLVTGYLTGKDN  RDFTQS
Sbjct: 87   MGVTTTMEAINEKILSLNYGDLIAEIKSVDAQESFGGGVLVLVTGYLTGKDNRSRDFTQS 146

Query: 1239 FFLAPQERGGYYVLNDMFRYLEKANQTCANQVLNXXXXXXXXXXXXXXXVQEDHVTEQSD 1060
            FFLAPQ++ GY+VLND+FRY+E       N  L                VQE+H+ E + 
Sbjct: 147  FFLAPQDK-GYFVLNDLFRYIEDVKYQDGNPGLVSEVEAPLTPEQDPSPVQENHILEPTP 205

Query: 1059 ALALEANEEVVHNVSENGEIKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 880
             +  E NEE V+N SENGE                                         
Sbjct: 206  EVXEEVNEE-VYNPSENGEAS------------------------------------VEE 228

Query: 879  XELPVQEVIKNLPNNSNVVGESNIKSEELPKKSYASIVKDLKEKGLPFSSPAPVLRKTPQ 700
             E PV EV+  +  +  +V  S+ K  E+PKKSYASIVK +KE  +PFSSP P   +   
Sbjct: 229  EEAPVAEVVDEI-QDDQMVTISDSKILEVPKKSYASIVKVMKESSVPFSSPTPXPXRPVP 287

Query: 699  KSREQQVK----PTPPASSNTYVSASILNAAENVNQDLESDGYSIYIKGLPYNATPSLLE 532
            K +EQQV     PTP A +N   + +        NQD E+DG+SIYI+GLP NATP+LLE
Sbjct: 288  KIQEQQVTVAPLPTPGAEANAIENGN--------NQDGEADGHSIYIRGLPSNATPALLE 339

Query: 531  DEFKKYGTIKNGGIQVRS-KQGFCFG 457
            DEFKK+G IK+GG+QVRS KQGFCFG
Sbjct: 340  DEFKKFGPIKSGGVQVRSNKQGFCFG 365



 Score = 82.4 bits (202), Expect(2) = 5e-83
 Identities = 49/120 (40%), Positives = 70/120 (58%)
 Frame = -2

Query: 367 ASAVQNAIEASPILLGGRKVIVEEKKSTNSGVNSRGRFPYGRAANYRNDSGYRNEXXXXX 188
           ASAVQ+A+EASPI +GGR+  VEEK+STN  +N+R RF  GR   +RN+ G         
Sbjct: 372 ASAVQSAMEASPITIGGRQAFVEEKRSTN--MNNRTRFSNGRGVVFRNEGG------RGR 423

Query: 187 XXXXXXXXXXXXXXXGKTEFSNRGNYRGGSTNNINNEYQRDESLGTSGGRMTRANGMLGN 8
                           +++F NRG+ RGG  N   + YQR + +G++GGR+ RA+G+  N
Sbjct: 424 GNYGGNRGYNRGDFNSRSDFGNRGS-RGGFPNRGGDGYQRTDHVGSNGGRVNRASGLTVN 482


>ref|XP_003532266.1| PREDICTED: putative G3BP-like protein-like [Glycine max]
          Length = 462

 Score =  226 bits (576), Expect(2) = 2e-73
 Identities = 142/323 (43%), Positives = 189/323 (58%), Gaps = 2/323 (0%)
 Frame = -3

Query: 1419 MSITTTMTAINEKILSLNYGEFRAEIKSVDAQESLNNGVHVLVTGYLTGKDNVVRDFTQS 1240
            M ITTTM  IN+KILSL YGE  AEI SVDAQES + GV VLVTG++ GKD++ + FTQ 
Sbjct: 56   MGITTTMLDINKKILSLGYGELSAEIVSVDAQESYDGGVIVLVTGFMIGKDDIKQKFTQC 115

Query: 1239 FFLAPQERGGYYVLNDMFRYL-EKANQTCANQVLNXXXXXXXXXXXXXXXVQEDHVTEQS 1063
            FFLAPQE+G Y+VLND+FRY+ E   Q  A+ + +                 E  V+EQ 
Sbjct: 116  FFLAPQEKG-YFVLNDVFRYVDENGIQGSAHDIGSPAPPDTVSNPSVL----ETQVSEQI 170

Query: 1062 DALALEANEEVVHNVSENGEIKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 883
               A + +EEVV+N  ENG+                                        
Sbjct: 171  SVTAEDGDEEVVYN-PENGQAAIEEEEA-------------------------------- 197

Query: 882  XXELPVQEVIKNLPNNSNVVGESNIKSEELPKKSYASIVKDLKEKGLPFSSPAPVLRKTP 703
                PV EV+  +P++S +V     + EE+PKKSYA IVK +KE  +P S+  PV  K+ 
Sbjct: 198  ----PVPEVLDEIPDDSQMVAGLASQIEEVPKKSYAYIVKVMKEGAMPSSTVTPVPVKSA 253

Query: 702  QKSREQQVKPTPPASSNTYVSASILNAAENVN-QDLESDGYSIYIKGLPYNATPSLLEDE 526
             KS+EQQ    PP SS +  + S++N  E  N Q+ E++GYSIY+KGLP  ATP++LE+E
Sbjct: 254  HKSQEQQGIAAPPPSSISETNGSVINTNEVGNIQEAEAEGYSIYVKGLPPTATPAVLENE 313

Query: 525  FKKYGTIKNGGIQVRSKQGFCFG 457
            FKK+G IK+GGIQVRS++GF +G
Sbjct: 314  FKKFGPIKSGGIQVRSQKGFSYG 336



 Score = 78.2 bits (191), Expect(2) = 2e-73
 Identities = 50/120 (41%), Positives = 66/120 (55%)
 Frame = -2

Query: 367 ASAVQNAIEASPILLGGRKVIVEEKKSTNSGVNSRGRFPYGRAANYRNDSGYRNEXXXXX 188
           ASA Q+A+EASPI + GR V+VEEK+STN G   RGRF  GRA ++R + G R       
Sbjct: 343 ASAAQSALEASPISINGRLVVVEEKRSTNRG---RGRFSSGRAPSFRGE-GARGR----G 394

Query: 187 XXXXXXXXXXXXXXXGKTEFSNRGNYRGGSTNNINNEYQRDESLGTSGGRMTRANGMLGN 8
                          G+ E+  R   RGG ++   + YQR++ +GT GGRM RA G   N
Sbjct: 395 NYGNGRTYGRGGDFNGRGEYGYRNGNRGGFSSRGGDGYQRNDHMGTGGGRMNRAGGSAVN 454


>ref|XP_003551349.1| PREDICTED: putative G3BP-like protein-like [Glycine max]
          Length = 466

 Score =  222 bits (565), Expect(2) = 8e-73
 Identities = 143/323 (44%), Positives = 184/323 (56%), Gaps = 2/323 (0%)
 Frame = -3

Query: 1419 MSITTTMTAINEKILSLNYGEFRAEIKSVDAQESLNNGVHVLVTGYLTGKDNVVRDFTQS 1240
            M ITTTM  IN+KILSL YGE  AEI SVDAQES   GV VLVTG++ GKD++ + FTQ 
Sbjct: 56   MGITTTMFDINKKILSLGYGELSAEIVSVDAQESYGGGVIVLVTGFMIGKDDIKQKFTQC 115

Query: 1239 FFLAPQERGGYYVLNDMFRYL-EKANQTCANQVLNXXXXXXXXXXXXXXXVQEDHVTEQS 1063
            FFLAPQE+G Y+VLND+FRY+ E   Q  A+ +                 V E  V+EQ 
Sbjct: 116  FFLAPQEKG-YFVLNDVFRYVDENGIQGSAHDI----GTPAPPDTVADPSVLETQVSEQI 170

Query: 1062 DALALEANEEVVHNVSENGEIKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 883
               A +  EEV +   ENG+                                        
Sbjct: 171  SVTAEDGGEEVYN--PENGQAAIEEEEA-------------------------------- 196

Query: 882  XXELPVQEVIKNLPNNSNVVGESNIKSEELPKKSYASIVKDLKEKGLPFSSPAPVLRKTP 703
                PV EV+  +P++S +V     + EE+PKKSYA IVK +KE   P S+  PV  K+ 
Sbjct: 197  ----PVPEVLDEIPDDSQMVAGLASQIEEVPKKSYAYIVKVMKEGAAPSSTVTPVSVKSA 252

Query: 702  QKSREQQVKPTPPASSNTYVSASILNAAE-NVNQDLESDGYSIYIKGLPYNATPSLLEDE 526
             KS+EQQ    PP SS +  + SI+N  E   NQ+ E++GYSIY+KGLP  ATP++LE+E
Sbjct: 253  HKSQEQQGIAAPPPSSISETNGSIINTNEVGNNQETEAEGYSIYVKGLPPTATPAVLENE 312

Query: 525  FKKYGTIKNGGIQVRSKQGFCFG 457
            FKK+G IK+GGIQVRS++GF FG
Sbjct: 313  FKKFGPIKSGGIQVRSQKGFSFG 335



 Score = 80.1 bits (196), Expect(2) = 8e-73
 Identities = 54/126 (42%), Positives = 71/126 (56%), Gaps = 6/126 (4%)
 Frame = -2

Query: 367 ASAVQNAIEASPILLGGRKVIVEEKKSTNSGVNSRGRFPYGRAANYRNDSGYRNEXXXXX 188
           ASAVQ+A+EASPIL+ GR+V+VEEK+STN G   RGRF  GRA ++R + G R       
Sbjct: 342 ASAVQSALEASPILINGRQVVVEEKRSTNRG-KCRGRFSSGRAPSFRGE-GARGR----- 394

Query: 187 XXXXXXXXXXXXXXXGKTEFSNRGNY------RGGSTNNINNEYQRDESLGTSGGRMTRA 26
                          G+ +F+ RG Y      RGG +    + YQR++ +GT GGRM RA
Sbjct: 395 ------GNYGNGRSYGRGDFNGRGEYGYRNGNRGGFSR--GDGYQRNDHMGTGGGRMNRA 446

Query: 25  NGMLGN 8
            G   N
Sbjct: 447 GGSAVN 452


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