BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00011436
         (1444 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281594.1| PREDICTED: cleavage and polyadenylation spec...   380   e-103
ref|XP_002523201.1| conserved hypothetical protein [Ricinus comm...   360   7e-97
ref|XP_003546247.1| PREDICTED: cleavage and polyadenylation spec...   355   2e-95
ref|XP_003534764.1| PREDICTED: cleavage and polyadenylation spec...   344   3e-92
ref|XP_004141524.1| PREDICTED: cleavage and polyadenylation spec...   337   6e-90

>ref|XP_002281594.1| PREDICTED: cleavage and polyadenylation specificity factor
            CPSF30-like [Vitis vinifera]
          Length = 673

 Score =  380 bits (977), Expect = e-103
 Identities = 210/387 (54%), Positives = 231/387 (59%), Gaps = 10/387 (2%)
 Frame = +3

Query: 3    IFSVNRTRNFQGCAKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHL 182
            IFSVNRTR+FQGCAKMTSKIGG VGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHL
Sbjct: 292  IFSVNRTRHFQGCAKMTSKIGGFVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHL 351

Query: 183  RNPYNENLPVKISRDCQELEPSVGEQLASLLYLEPDSELMEISXXXXXXXXXXXXXGVDP 362
            RNPYNENLPVKISRDCQELEPS+GEQLASLLYLEPDSELM IS             GV+P
Sbjct: 352  RNPYNENLPVKISRDCQELEPSIGEQLASLLYLEPDSELMAISLAAESKREEEKAKGVNP 411

Query: 363  EDGTENQDIVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWPPHMPLARGAR 542
            ++G EN DIVP                                     WPPHMPLARGAR
Sbjct: 412  DNGGENPDIVPFEDNEEEEEEESEEEEESFGQALGPAAQGRGRGRGIMWPPHMPLARGAR 471

Query: 543  PMPGMRGFPPVMMXXXXXXXXXXXXXXXXXXXLFNMXXXXXXXXXXXXXXDFSGP-GGMM 719
            P+P MRGFPPVMM                   +F +              DF+GP  GMM
Sbjct: 472  PIPSMRGFPPVMMGADGFSYSAVPPDGFAMPDIFGVGPRAFPPYGPRFSGDFTGPASGMM 531

Query: 720  FQGRPFQ-XXXXXXXXXXXXXXXRAPFM--------XXXXXXXXXXMHPMYPPHQSQPSL 872
            F GR                   RAPFM                  M PM+PP    P+ 
Sbjct: 532  FPGRGQPGAVFPASGYGMMMGPGRAPFMGGMGVPAAAPTRAGRPVGMPPMFPP-PPPPNS 590

Query: 873  TSNKGKRDQKATVNDRSDIYSAGSDQGKGIEMVGSGGGQDDEVQYQQKINPQQEDQIGVG 1052
             +N+ KRDQ+  VNDR+D YS GSDQG+G +M     G DDE QY Q +  QQ+DQ G G
Sbjct: 591  QNNRTKRDQRTPVNDRNDRYSGGSDQGRGQDM----AGPDDETQYLQGLKSQQDDQFGGG 646

Query: 1053 NSFKNDESASEDEAPRRSRHGEGRKKR 1133
            NSF+NDES SEDEAPRRSRHGEG+KKR
Sbjct: 647  NSFRNDESESEDEAPRRSRHGEGKKKR 673


>ref|XP_002523201.1| conserved hypothetical protein [Ricinus communis]
            gi|223537608|gb|EEF39232.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 702

 Score =  360 bits (923), Expect = 7e-97
 Identities = 208/397 (52%), Positives = 228/397 (57%), Gaps = 8/397 (2%)
 Frame = +3

Query: 3    IFSVNRTRNFQGCAKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHL 182
            IFSVNRTR+FQGCAKMTSKIG SVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHL
Sbjct: 314  IFSVNRTRHFQGCAKMTSKIGASVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHL 373

Query: 183  RNPYNENLPVKISRDCQELEPSVGEQLASLLYLEPDSELMEISXXXXXXXXXXXXXGVDP 362
            RNPYNENLPVKISRDCQELEPSVG QLA LLY EPDSELM IS             GV+P
Sbjct: 374  RNPYNENLPVKISRDCQELEPSVGGQLACLLYDEPDSELMAISLAAEAKREEEKAKGVNP 433

Query: 363  EDGTENQDIVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWPPHMPLARGAR 542
            E+G +N DIVP                                     W PHMPLARGAR
Sbjct: 434  ENGGDNPDIVPFEDNEEEEEEESEEEEESFGQALGAPGQGRGRGRGIIW-PHMPLARGAR 492

Query: 543  PMPGMRGFPPVMMXXXXXXXXXXXXXXXXXXXLFNMXXXXXXXXXXXXXXDFSG-PGGMM 719
            P+PGMRGFPP+MM                   LF +              DF+G   GMM
Sbjct: 493  PIPGMRGFPPMMMGADSFSYGPVTPDGFGMPDLFGVAPRGFTPYAPRFSGDFTGAASGMM 552

Query: 720  FQGRPFQ--XXXXXXXXXXXXXXXRAPFMXXXXXXXXXXMHPMYPPHQSQPSLTS----N 881
            F GRP Q                 RAPFM          +   +P     P L +     
Sbjct: 553  FPGRPPQPGGVFPNGGFGMMMGPGRAPFMGGMGPNSTNPLRGNWPGGMPFPPLPTPSPQR 612

Query: 882  KGKRDQKATVNDRSDIYSAGSDQGKGIEMVGSGGGQDDEVQYQQK-INPQQEDQIGVGNS 1058
              KRDQ+ T NDR   YS GSDQG+      + G  DDE +YQQ+ +    EDQ G GNS
Sbjct: 613  PVKRDQRMTANDR---YSTGSDQGR-----NTAGEPDDEARYQQEGLKASHEDQFGAGNS 664

Query: 1059 FKNDESASEDEAPRRSRHGEGRKKRRSSERDETTGSE 1169
            F+NDES SEDEAPRRSRHGEG+KKRR SE D T GS+
Sbjct: 665  FRNDESESEDEAPRRSRHGEGKKKRRGSEGDATPGSD 701


>ref|XP_003546247.1| PREDICTED: cleavage and polyadenylation specificity factor
            CPSF30-like [Glycine max]
          Length = 691

 Score =  355 bits (910), Expect = 2e-95
 Identities = 197/390 (50%), Positives = 223/390 (57%), Gaps = 12/390 (3%)
 Frame = +3

Query: 3    IFSVNRTRNFQGCAKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHL 182
            +FSVNRTR+FQGCAKMTS+IGGSV GGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHL
Sbjct: 304  VFSVNRTRHFQGCAKMTSRIGGSVAGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHL 363

Query: 183  RNPYNENLPVKISRDCQELEPSVGEQLASLLYLEPDSELMEISXXXXXXXXXXXXXGVDP 362
            RNPYNENLPVKISRDCQELEPS+GEQLASLLYLEPDSELM IS             GV+P
Sbjct: 364  RNPYNENLPVKISRDCQELEPSIGEQLASLLYLEPDSELMAISVAAESKREEEKAKGVNP 423

Query: 363  EDGTENQDIVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWPPHMPLARGAR 542
            ++G EN DIVP                                     WPPHMPL RGAR
Sbjct: 424  DNGGENPDIVPFEDNEEEEEEESDEEEESFSHGVGPAGQGRGRGRGMMWPPHMPLGRGAR 483

Query: 543  PMPGMRGFPPVMM--XXXXXXXXXXXXXXXXXXXLFNMXXXXXXXXXXXXXXDFSG-PGG 713
            PMPGM+GF PVMM                     LF +              DF G P  
Sbjct: 484  PMPGMQGFNPVMMGDGLSYGPVGPVGPDGFGMPDLFGVGPRGFAPYGPRFSGDFGGPPAA 543

Query: 714  MMFQGRPFQ-XXXXXXXXXXXXXXXRAPFM--------XXXXXXXXXXMHPMYPPHQSQP 866
            MMF+GRP Q                R PFM                  M PM+PP    P
Sbjct: 544  MMFRGRPSQPGMFPSGGFGMMMNPGRGPFMGGMGVGGANPPRGGRPVNMPPMFPPPPPLP 603

Query: 867  SLTSNKGKRDQKATVNDRSDIYSAGSDQGKGIEMVGSGGGQDDEVQYQQKINPQQEDQIG 1046
               +   KRDQ+    DR+D + +GS+QGK  +M+   GG DD+ QYQQ     Q+D   
Sbjct: 604  QNANRAAKRDQRTA--DRNDRFGSGSEQGKSQDMLSQSGGPDDDAQYQQGYKGNQDDHPA 661

Query: 1047 VGNSFKNDESASEDEAPRRSRHGEGRKKRR 1136
            V N+F+ND+S SEDEAPRRSRHGEG+KK +
Sbjct: 662  V-NNFRNDDSESEDEAPRRSRHGEGKKKHK 690


>ref|XP_003534764.1| PREDICTED: cleavage and polyadenylation specificity factor
            CPSF30-like [Glycine max]
          Length = 681

 Score =  344 bits (883), Expect = 3e-92
 Identities = 195/388 (50%), Positives = 217/388 (55%), Gaps = 10/388 (2%)
 Frame = +3

Query: 3    IFSVNRTRNFQGCAKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHL 182
            IFSVNRTR+FQGCAKMTSKIGGSV GGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHL
Sbjct: 304  IFSVNRTRHFQGCAKMTSKIGGSVAGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHL 363

Query: 183  RNPYNENLPVKISRDCQELEPSVGEQLASLLYLEPDSELMEISXXXXXXXXXXXXXGVDP 362
            RNPYNENLPVKISRDCQELEPS+GEQLASLLYLEPDSELM IS             GV+P
Sbjct: 364  RNPYNENLPVKISRDCQELEPSIGEQLASLLYLEPDSELMAISVAAESKREEEKAKGVNP 423

Query: 363  EDGTENQDIVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWPPHMPLARGAR 542
            ++G EN DIVP                                     WPPHMPL RGAR
Sbjct: 424  DNGGENPDIVPFEDNEEEEEEESDEEEESFGHGVGPAGQGRGRGRGMMWPPHMPLGRGAR 483

Query: 543  PMPGMRGFPPVMMXXXXXXXXXXXXXXXXXXXLFNMXXXXXXXXXXXXXXDFSG-PGGMM 719
            PMPGM+GF PVMM                   LF +              DF G P  MM
Sbjct: 484  PMPGMQGFNPVMM-GDGLSYGPVGPDGFGMPDLFGVGPRGFAPYGPRFSGDFGGPPAAMM 542

Query: 720  FQGRPFQ-XXXXXXXXXXXXXXXRAPFM--------XXXXXXXXXXMHPMYPPHQSQPSL 872
            F+GRP Q                R PFM                  M PM+PP    P  
Sbjct: 543  FRGRPSQPGMFPGGGFGMMLNPGRGPFMGGIGVGGANPPRGGRPVNMPPMFPPPPPLPQN 602

Query: 873  TSNKGKRDQKATVNDRSDIYSAGSDQGKGIEMVGSGGGQDDEVQYQQKINPQQEDQIGVG 1052
             +   KRDQ+    DR+D + +GS+QGK  +M+   GG DD+ QYQQ     Q+D     
Sbjct: 603  ANRAAKRDQRTA--DRNDRFGSGSEQGKSQDMLSQSGGPDDDPQYQQGYKGNQDDH---- 656

Query: 1053 NSFKNDESASEDEAPRRSRHGEGRKKRR 1136
                 D+S SEDEAPRRSRHGEG+KK +
Sbjct: 657  ----PDDSESEDEAPRRSRHGEGKKKHK 680


>ref|XP_004141524.1| PREDICTED: cleavage and polyadenylation specificity factor
            CPSF30-like [Cucumis sativus]
          Length = 707

 Score =  337 bits (863), Expect = 6e-90
 Identities = 195/405 (48%), Positives = 224/405 (55%), Gaps = 15/405 (3%)
 Frame = +3

Query: 3    IFSVNRTRNFQGCAKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHL 182
            IFSVNRTR+FQGCAKM S+IGGSV GGNWKYAHGT HYG+NFS+KWLKLCELSF KTRHL
Sbjct: 308  IFSVNRTRHFQGCAKMMSRIGGSVSGGNWKYAHGTPHYGQNFSLKWLKLCELSFQKTRHL 367

Query: 183  RNPYNENLPVKISRDCQELEPSVGEQLASLLYLEPDSELMEISXXXXXXXXXXXXXGVDP 362
            RNPYNENLPVKISRDCQELEPSVGEQLASLLYLEPD ELM +S             GV+P
Sbjct: 368  RNPYNENLPVKISRDCQELEPSVGEQLASLLYLEPDGELMAVSVAAESKREEEKAKGVNP 427

Query: 363  EDGTENQDIVP-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWPPHMPLARGA 539
            + G+EN DIVP                                      WPPHMP+ RGA
Sbjct: 428  DIGSENPDIVPFEDNEEEEEEESEEEEEESFGQSAGLPPQGRGRGRGMMWPPHMPMGRGA 487

Query: 540  RPMPGMRGFPPVMMXXXXXXXXXXXXXXXXXXXLFNM--XXXXXXXXXXXXXXDFSG-PG 710
            RP  GM+GFPP MM                   +F M                DF G P 
Sbjct: 488  RPFHGMQGFPPGMMGPDGLSYGPVTPDGFPMPDIFGMTPRGFGPYGPTPRFSGDFMGPPT 547

Query: 711  GMMFQGRPFQ--XXXXXXXXXXXXXXXRAPFM--------XXXXXXXXXXMHPMYPPHQS 860
             MMF+GRP Q                 R PFM                  + P+YPP   
Sbjct: 548  AMMFRGRPSQPAAMFPPSGFGMMMGQGRGPFMGGMGVAGANPARPGRPVGVSPLYPPPAV 607

Query: 861  QPSLTSNKG-KRDQKATVNDRSDIYSAGSDQGKGIEMVGSGGGQDDEVQYQQKINPQQED 1037
              S   N+  KRDQ+   NDR   Y  G DQ KG+E+  S  G+D+E+QY+Q      ++
Sbjct: 608  PSSQNMNRAIKRDQRGLTNDR---YIVGMDQNKGVEIQSS--GRDEEMQYKQGSKAYSDE 662

Query: 1038 QIGVGNSFKNDESASEDEAPRRSRHGEGRKKRRSSERDETTGSEK 1172
            Q G G +F+N+ES SEDEAPRRSRHGEG+KKRR SE D T  S +
Sbjct: 663  QYGTGTTFRNEESESEDEAPRRSRHGEGKKKRRGSEGDATAISNQ 707