BLASTX nr result

ID: Cnidium21_contig00011395 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00011395
         (738 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002512773.1| dead box ATP-dependent RNA helicase, putativ...   229   5e-84
emb|CBI14965.3| unnamed protein product [Vitis vinifera]              225   2e-82
ref|XP_002277894.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   225   2e-82
ref|XP_003525517.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   229   2e-82
ref|XP_002322195.1| predicted protein [Populus trichocarpa] gi|2...   222   2e-81

>ref|XP_002512773.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
           gi|223547784|gb|EEF49276.1| dead box ATP-dependent RNA
           helicase, putative [Ricinus communis]
          Length = 540

 Score =  229 bits (583), Expect(2) = 5e-84
 Identities = 117/156 (75%), Positives = 125/156 (80%)
 Frame = -2

Query: 479 TRELAVQIQQEATKFGARANIRCTCIYGGAPKGPQIRDLQRGVEIVIATPGRLIDMLEAQ 300
           TRELAVQIQ+EA KFG+RANIR TCIYGGAPKGPQIRDL RGVEIVIATPGRLIDMLEAQ
Sbjct: 307 TRELAVQIQEEALKFGSRANIRTTCIYGGAPKGPQIRDLHRGVEIVIATPGRLIDMLEAQ 366

Query: 299 HANLKRVTYLVLDEADRMXXXXXXXXXXXXXXXXXXXXXDEADRMLDMGFEPQIRKIIAQ 120
           H NL+RVTYLVLD                           EADRMLDMGFEPQIRK+++Q
Sbjct: 367 HTNLRRVTYLVLD---------------------------EADRMLDMGFEPQIRKLVSQ 399

Query: 119 IRPDRQTLYWSATWPKEVETLARQFLRNPYKVIIGS 12
           IRPDRQTLYWSATWP+EVETLARQFLRNPYKV+IGS
Sbjct: 400 IRPDRQTLYWSATWPREVETLARQFLRNPYKVVIGS 435



 Score =  108 bits (271), Expect(2) = 5e-84
 Identities = 50/58 (86%), Positives = 56/58 (96%)
 Frame = -3

Query: 736 VFTRLGFVEPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLMPALIHVSAQPRLVQG 563
           V  +LGFVEPTPIQ+QGWPMALKGRD+IGIAETGSGKTLAY++PAL+HVSAQPRLVQG
Sbjct: 239 VIAKLGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLAYVLPALVHVSAQPRLVQG 296


>emb|CBI14965.3| unnamed protein product [Vitis vinifera]
          Length = 611

 Score =  225 bits (574), Expect(2) = 2e-82
 Identities = 118/156 (75%), Positives = 123/156 (78%)
 Frame = -2

Query: 479 TRELAVQIQQEATKFGARANIRCTCIYGGAPKGPQIRDLQRGVEIVIATPGRLIDMLEAQ 300
           TRELAVQIQ+EA KFG+   IR TCIYGGAPKGPQIRDLQRGVEIVIATPGRLIDMLEAQ
Sbjct: 378 TRELAVQIQEEALKFGSFTKIRSTCIYGGAPKGPQIRDLQRGVEIVIATPGRLIDMLEAQ 437

Query: 299 HANLKRVTYLVLDEADRMXXXXXXXXXXXXXXXXXXXXXDEADRMLDMGFEPQIRKIIAQ 120
           H NL+RVTYLVLD                           EADRMLDMGFEPQIRKII+Q
Sbjct: 438 HTNLRRVTYLVLD---------------------------EADRMLDMGFEPQIRKIISQ 470

Query: 119 IRPDRQTLYWSATWPKEVETLARQFLRNPYKVIIGS 12
           IRPDRQTLYWSATWP+EVETLARQFLRNPYKVIIGS
Sbjct: 471 IRPDRQTLYWSATWPREVETLARQFLRNPYKVIIGS 506



 Score =  107 bits (266), Expect(2) = 2e-82
 Identities = 50/58 (86%), Positives = 55/58 (94%)
 Frame = -3

Query: 736 VFTRLGFVEPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLMPALIHVSAQPRLVQG 563
           V  +LGFVEPTPIQ+QGWPMALKGRDLIGIAETGSGKTLAYL+PAL+HVSAQP LV+G
Sbjct: 310 VIAKLGFVEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPALVHVSAQPPLVRG 367


>ref|XP_002277894.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 30-like [Vitis
           vinifera]
          Length = 611

 Score =  225 bits (574), Expect(2) = 2e-82
 Identities = 118/156 (75%), Positives = 123/156 (78%)
 Frame = -2

Query: 479 TRELAVQIQQEATKFGARANIRCTCIYGGAPKGPQIRDLQRGVEIVIATPGRLIDMLEAQ 300
           TRELAVQIQ+EA KFG+   IR TCIYGGAPKGPQIRDLQRGVEIVIATPGRLIDMLEAQ
Sbjct: 271 TRELAVQIQEEALKFGSFTKIRSTCIYGGAPKGPQIRDLQRGVEIVIATPGRLIDMLEAQ 330

Query: 299 HANLKRVTYLVLDEADRMXXXXXXXXXXXXXXXXXXXXXDEADRMLDMGFEPQIRKIIAQ 120
           H NL+RVTYLVLD                           EADRMLDMGFEPQIRKII+Q
Sbjct: 331 HTNLRRVTYLVLD---------------------------EADRMLDMGFEPQIRKIISQ 363

Query: 119 IRPDRQTLYWSATWPKEVETLARQFLRNPYKVIIGS 12
           IRPDRQTLYWSATWP+EVETLARQFLRNPYKVIIGS
Sbjct: 364 IRPDRQTLYWSATWPREVETLARQFLRNPYKVIIGS 399



 Score =  107 bits (266), Expect(2) = 2e-82
 Identities = 50/58 (86%), Positives = 55/58 (94%)
 Frame = -3

Query: 736 VFTRLGFVEPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLMPALIHVSAQPRLVQG 563
           V  +LGFVEPTPIQ+QGWPMALKGRDLIGIAETGSGKTLAYL+PAL+HVSAQP LV+G
Sbjct: 203 VIAKLGFVEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPALVHVSAQPPLVRG 260


>ref|XP_003525517.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 30-like [Glycine
           max]
          Length = 599

 Score =  229 bits (584), Expect(2) = 2e-82
 Identities = 120/159 (75%), Positives = 126/159 (79%)
 Frame = -2

Query: 479 TRELAVQIQQEATKFGARANIRCTCIYGGAPKGPQIRDLQRGVEIVIATPGRLIDMLEAQ 300
           TRELAVQIQ+EA KFG+RAN R TCIYGGAPKGPQIR+L+RGVEIVIATPGRLIDMLEAQ
Sbjct: 250 TRELAVQIQEEALKFGSRANKRSTCIYGGAPKGPQIRELKRGVEIVIATPGRLIDMLEAQ 309

Query: 299 HANLKRVTYLVLDEADRMXXXXXXXXXXXXXXXXXXXXXDEADRMLDMGFEPQIRKIIAQ 120
           H NLKRVTYLVLD                           EADRMLDMGFEPQIRKI+AQ
Sbjct: 310 HTNLKRVTYLVLD---------------------------EADRMLDMGFEPQIRKIVAQ 342

Query: 119 IRPDRQTLYWSATWPKEVETLARQFLRNPYKVIIGSPVL 3
           IRPDRQTL WSATWP+EVETLARQFLRNPYKVIIGSP L
Sbjct: 343 IRPDRQTLLWSATWPREVETLARQFLRNPYKVIIGSPYL 381



 Score =  103 bits (256), Expect(2) = 2e-82
 Identities = 47/58 (81%), Positives = 52/58 (89%)
 Frame = -3

Query: 736 VFTRLGFVEPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLMPALIHVSAQPRLVQG 563
           V   LGF EPTPIQ+QGWPMALKGRDLIGIAETGSGKTL+YL+PAL+HV+AQPRL  G
Sbjct: 182 VIANLGFAEPTPIQAQGWPMALKGRDLIGIAETGSGKTLSYLLPALVHVNAQPRLAHG 239


>ref|XP_002322195.1| predicted protein [Populus trichocarpa] gi|222869191|gb|EEF06322.1|
           predicted protein [Populus trichocarpa]
          Length = 450

 Score =  222 bits (566), Expect(2) = 2e-81
 Identities = 115/156 (73%), Positives = 122/156 (78%)
 Frame = -2

Query: 479 TRELAVQIQQEATKFGARANIRCTCIYGGAPKGPQIRDLQRGVEIVIATPGRLIDMLEAQ 300
           TRELAVQIQ+EA KFG++ANIR TCIYGGAPKGPQIRDLQRGVEIVIATPGRLIDML AQ
Sbjct: 150 TRELAVQIQEEALKFGSKANIRSTCIYGGAPKGPQIRDLQRGVEIVIATPGRLIDMLGAQ 209

Query: 299 HANLKRVTYLVLDEADRMXXXXXXXXXXXXXXXXXXXXXDEADRMLDMGFEPQIRKIIAQ 120
           H NL+RVTYLVLD                           EADRMLDMGFEPQIRKI++Q
Sbjct: 210 HVNLRRVTYLVLD---------------------------EADRMLDMGFEPQIRKIVSQ 242

Query: 119 IRPDRQTLYWSATWPKEVETLARQFLRNPYKVIIGS 12
           IRPDRQTLYWSATWP+EVE LAR FL NPYKVIIGS
Sbjct: 243 IRPDRQTLYWSATWPREVEALARHFLHNPYKVIIGS 278



 Score =  106 bits (265), Expect(2) = 2e-81
 Identities = 49/58 (84%), Positives = 54/58 (93%)
 Frame = -3

Query: 736 VFTRLGFVEPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLMPALIHVSAQPRLVQG 563
           V  +LGFVEPTPIQ+QGWPMALKGRDLIGIAETGSGKTLAYL+PA +HV+AQPRLV G
Sbjct: 82  VIAKLGFVEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAFVHVAAQPRLVHG 139