BLASTX nr result

ID: Cnidium21_contig00011394 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00011394
         (689 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002520033.1| catalytic, putative [Ricinus communis] gi|22...    73   4e-23
ref|XP_003540609.1| PREDICTED: probable glucuronoxylan glucurono...    91   2e-16
ref|XP_004167395.1| PREDICTED: probable glucuronoxylan glucurono...    90   5e-16
ref|XP_004144725.1| PREDICTED: probable glucuronoxylan glucurono...    90   5e-16
emb|CBI20132.3| unnamed protein product [Vitis vinifera]               88   2e-15

>ref|XP_002520033.1| catalytic, putative [Ricinus communis] gi|223540797|gb|EEF42357.1|
           catalytic, putative [Ricinus communis]
          Length = 507

 Score = 73.2 bits (178), Expect(3) = 4e-23
 Identities = 34/40 (85%), Positives = 36/40 (90%)
 Frame = -3

Query: 687 CLSPSGDTPSSGRSFDAIVSGCIPVIISDELELPF*GIFD 568
           CLSP+GDTPSS R FDAIVSGCIPVI+SDELELPF GI D
Sbjct: 364 CLSPAGDTPSSARLFDAIVSGCIPVIVSDELELPFEGILD 403



 Score = 45.8 bits (107), Expect(3) = 4e-23
 Identities = 26/36 (72%), Positives = 28/36 (77%), Gaps = 1/36 (2%)
 Frame = -3

Query: 465 LSGTLVNIKLHTRMS-RVVKESRSRCT*D*KPANLT 361
           ++G LVNIKLHTR S RVVKESRS CT D K AN T
Sbjct: 467 MAGKLVNIKLHTRRSQRVVKESRSVCTCDCKRANFT 502



 Score = 35.0 bits (79), Expect(3) = 4e-23
 Identities = 13/27 (48%), Positives = 21/27 (77%)
 Frame = -2

Query: 553 AVEPGWLLAYLRSFSAAQLKEMRLNLL 473
           A++PGWL+ +L+  S AQ +EM+ NL+
Sbjct: 416 AIQPGWLIKFLKDVSPAQTREMQRNLV 442


>ref|XP_003540609.1| PREDICTED: probable glucuronoxylan glucuronosyltransferase F8H-like
           [Glycine max]
          Length = 494

 Score = 91.3 bits (225), Expect = 2e-16
 Identities = 62/141 (43%), Positives = 77/141 (54%), Gaps = 30/141 (21%)
 Frame = -3

Query: 687 CLSPSGDTPSSGRSFDAIVSGCIPVIISDELELPF*GIFD----------------DWKN 556
           CLSP+GDTPSS R FDAIVSGCIPVIISDELELPF GI D                 W  
Sbjct: 349 CLSPAGDTPSSARLFDAIVSGCIPVIISDELELPFEGILDYRKIAVFISSNDAVKPGWLL 408

Query: 555 MP*SQVGF*HISEVLVLLNSKKCD*IYLA-------------KLSGTLVNIKLHTRMS-R 418
                +   HI E+   L       +Y +              ++G +VNIKLHTR S R
Sbjct: 409 KYLKGIRPAHIKEMQQNLAKYSRHFLYSSPALPLGPEDLVWKMMAGKVVNIKLHTRRSQR 468

Query: 417 VVKESRSRCT*D*KPANLTSS 355
           VV+ SRS+CT + +P N+T++
Sbjct: 469 VVEGSRSQCTCECRPGNITNT 489


>ref|XP_004167395.1| PREDICTED: probable glucuronoxylan glucuronosyltransferase
           IRX7-like [Cucumis sativus]
          Length = 517

 Score = 89.7 bits (221), Expect = 5e-16
 Identities = 69/141 (48%), Positives = 77/141 (54%), Gaps = 30/141 (21%)
 Frame = -3

Query: 687 CLSPSGDTPSSGRSFDAIVSGCIPVIISDELELPF*GIFDDWK-NMP*SQVGF*HISEVL 511
           CLSP+GDTPSS R FDAIVSGCIPVI+SDELELPF GI D  K  +  S         +L
Sbjct: 373 CLSPAGDTPSSARLFDAIVSGCIPVIVSDELELPFEGILDYRKIALFVSSSDALKSGWLL 432

Query: 510 VLLNSKKCD*I-----YLAKLS-----------------------GTLVNIKLHTRMS-R 418
             L S     I      LAKLS                       G LVNIKLHTR S R
Sbjct: 433 TYLRSFSAADIRRLQQNLAKLSRHFIYSSPAQPMGPEDLAWKMIGGKLVNIKLHTRRSQR 492

Query: 417 VVKESRSRCT*D*KPANLTSS 355
           VVKESRS C+ D + +N T+S
Sbjct: 493 VVKESRSVCSCDCRRSNFTNS 513


>ref|XP_004144725.1| PREDICTED: probable glucuronoxylan glucuronosyltransferase
           IRX7-like [Cucumis sativus]
          Length = 518

 Score = 89.7 bits (221), Expect = 5e-16
 Identities = 69/141 (48%), Positives = 77/141 (54%), Gaps = 30/141 (21%)
 Frame = -3

Query: 687 CLSPSGDTPSSGRSFDAIVSGCIPVIISDELELPF*GIFDDWK-NMP*SQVGF*HISEVL 511
           CLSP+GDTPSS R FDAIVSGCIPVI+SDELELPF GI D  K  +  S         +L
Sbjct: 373 CLSPAGDTPSSARLFDAIVSGCIPVIVSDELELPFEGILDYRKIALFVSSSDALKSGWLL 432

Query: 510 VLLNSKKCD*I-----YLAKLS-----------------------GTLVNIKLHTRMS-R 418
             L S     I      LAKLS                       G LVNIKLHTR S R
Sbjct: 433 TYLRSFSAADIRRLQQNLAKLSRHFIYSSPAQPMGPEDLAWKMIGGKLVNIKLHTRRSQR 492

Query: 417 VVKESRSRCT*D*KPANLTSS 355
           VVKESRS C+ D + +N T+S
Sbjct: 493 VVKESRSVCSCDCRRSNFTNS 513


>emb|CBI20132.3| unnamed protein product [Vitis vinifera]
          Length = 379

 Score = 87.8 bits (216), Expect = 2e-15
 Identities = 61/139 (43%), Positives = 72/139 (51%), Gaps = 30/139 (21%)
 Frame = -3

Query: 687 CLSPSGDTPSSGRSFDAIVSGCIPVIISDELELPF*GIFD----------------DWKN 556
           CLSP+GDTPSS R FDAIVSGCIPVI+SDELELPF GI D                 W  
Sbjct: 239 CLSPAGDTPSSARLFDAIVSGCIPVIVSDELELPFEGILDYRKIALFVSSSDAMQPGWLL 298

Query: 555 MP*SQVGF*HISEVLVLLNSKKCD*IYLA-------------KLSGTLVNIKLHT-RMSR 418
                +    I E+   L       +Y +              ++G L+NIKLHT R+ R
Sbjct: 299 TFLKSISPAQIKEMQRNLAKYSRHFVYSSPAQLLGPEDLVWRMMAGKLMNIKLHTRRLQR 358

Query: 417 VVKESRSRCT*D*KPANLT 361
           VV+ESR  CT D K AN T
Sbjct: 359 VVRESRRLCTCDCKRANFT 377


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