BLASTX nr result

ID: Cnidium21_contig00011388 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00011388
         (447 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002527787.1| clathrin assembly protein, putative [Ricinus...    97   1e-18
ref|XP_002311513.1| predicted protein [Populus trichocarpa] gi|2...    97   2e-18
ref|XP_003531148.1| PREDICTED: putative clathrin assembly protei...    95   7e-18
ref|XP_003531147.1| PREDICTED: putative clathrin assembly protei...    95   7e-18
ref|XP_003531146.1| PREDICTED: putative clathrin assembly protei...    95   7e-18

>ref|XP_002527787.1| clathrin assembly protein, putative [Ricinus communis]
           gi|223532822|gb|EEF34597.1| clathrin assembly protein,
           putative [Ricinus communis]
          Length = 567

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 45/71 (63%), Positives = 52/71 (73%)
 Frame = -2

Query: 446 PPPSVQMGSAAQYQANPFGPYQQPFYAQPQHQPNLMMAPQNPFGDTGFGSFPVNNGAHLQ 267
           PP +VQM +  Q   NPFGPYQ P Y QPQ Q +LMM+P NPFGD GFG+FPVN   H  
Sbjct: 498 PPSAVQMAAMTQQPPNPFGPYQ-PTYPQPQQQQHLMMSPANPFGDAGFGTFPVNTVTHPH 556

Query: 266 TSNPFGSTGLL 234
           ++NPFGSTGLL
Sbjct: 557 SNNPFGSTGLL 567


>ref|XP_002311513.1| predicted protein [Populus trichocarpa] gi|222851333|gb|EEE88880.1|
           predicted protein [Populus trichocarpa]
          Length = 562

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 46/70 (65%), Positives = 52/70 (74%)
 Frame = -2

Query: 443 PPSVQMGSAAQYQANPFGPYQQPFYAQPQHQPNLMMAPQNPFGDTGFGSFPVNNGAHLQT 264
           PPSVQM +  Q   NPFGPYQ P Y QPQHQ N+MM+  NPFGD GFG+F  +  AH QT
Sbjct: 494 PPSVQMAAMTQQPHNPFGPYQ-PTYPQPQHQQNMMMSHANPFGDAGFGAFHAHPMAHPQT 552

Query: 263 SNPFGSTGLL 234
           +NPFGSTGLL
Sbjct: 553 NNPFGSTGLL 562


>ref|XP_003531148.1| PREDICTED: putative clathrin assembly protein At2g01600-like
           isoform 3 [Glycine max]
          Length = 575

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 48/75 (64%), Positives = 56/75 (74%), Gaps = 4/75 (5%)
 Frame = -2

Query: 446 PPPSVQMGSAAQYQANPFGPYQQPFYAQP---QHQPNLMMAPQNPFGDTGFGSFPVNNGA 276
           PPP+VQ+ +A Q QANPFGPYQQPF  QP   Q Q +++M P NPFGD GFG+FP  N A
Sbjct: 502 PPPAVQL-AAMQQQANPFGPYQQPFQPQPQPQQQQHHMLMNPANPFGDAGFGAFPAPNPA 560

Query: 275 -HLQTSNPFGSTGLL 234
            H Q +NPFGSTGLL
Sbjct: 561 PHPQNNNPFGSTGLL 575


>ref|XP_003531147.1| PREDICTED: putative clathrin assembly protein At2g01600-like
           isoform 2 [Glycine max]
          Length = 567

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 48/75 (64%), Positives = 56/75 (74%), Gaps = 4/75 (5%)
 Frame = -2

Query: 446 PPPSVQMGSAAQYQANPFGPYQQPFYAQP---QHQPNLMMAPQNPFGDTGFGSFPVNNGA 276
           PPP+VQ+ +A Q QANPFGPYQQPF  QP   Q Q +++M P NPFGD GFG+FP  N A
Sbjct: 494 PPPAVQL-AAMQQQANPFGPYQQPFQPQPQPQQQQHHMLMNPANPFGDAGFGAFPAPNPA 552

Query: 275 -HLQTSNPFGSTGLL 234
            H Q +NPFGSTGLL
Sbjct: 553 PHPQNNNPFGSTGLL 567


>ref|XP_003531146.1| PREDICTED: putative clathrin assembly protein At2g01600-like
           isoform 1 [Glycine max]
          Length = 568

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 48/75 (64%), Positives = 56/75 (74%), Gaps = 4/75 (5%)
 Frame = -2

Query: 446 PPPSVQMGSAAQYQANPFGPYQQPFYAQP---QHQPNLMMAPQNPFGDTGFGSFPVNNGA 276
           PPP+VQ+ +A Q QANPFGPYQQPF  QP   Q Q +++M P NPFGD GFG+FP  N A
Sbjct: 495 PPPAVQL-AAMQQQANPFGPYQQPFQPQPQPQQQQHHMLMNPANPFGDAGFGAFPAPNPA 553

Query: 275 -HLQTSNPFGSTGLL 234
            H Q +NPFGSTGLL
Sbjct: 554 PHPQNNNPFGSTGLL 568


Top