BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00011367
         (1423 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280960.2| PREDICTED: DNA topoisomerase 1-like [Vitis v...   714   0.0  
emb|CAN67233.1| hypothetical protein VITISV_020021 [Vitis vinifera]   697   0.0  
ref|XP_003545557.1| PREDICTED: DNA topoisomerase 1-like [Glycine...   668   0.0  
ref|XP_003551158.1| PREDICTED: DNA topoisomerase 1-like [Glycine...   658   0.0  
ref|NP_194849.3| DNA topoisomerase, type IA, core [Arabidopsis t...   641   0.0  

>ref|XP_002280960.2| PREDICTED: DNA topoisomerase 1-like [Vitis vinifera]
          Length = 1185

 Score =  714 bits (1843), Expect = 0.0
 Identities = 351/473 (74%), Positives = 397/473 (83%)
 Frame = +3

Query: 3    KPQEYWTLDVLFKEXXXXXXXXXXXXXXYLTHFQSKKLSKLSINSQTKAIDIQGEIEASE 182
            KPQEYWT++V F                YLTHF SKKL++ SI+S T+A  I+ EI + E
Sbjct: 568  KPQEYWTVEVEFNRKQGSSMNSKFFPS-YLTHFDSKKLNQFSISSHTEAKAIEQEINSLE 626

Query: 183  FEVSNTKRSKMRKNPPAPYITSSLQQDAANKLSFPATYTMKLAQKLYEGVQLPDGVSAGL 362
            F+V  +KR+KMRKNPP PYITS+LQQDAANKL F A YTMKLAQ+LYEGVQL DG +AGL
Sbjct: 627  FKVIGSKRNKMRKNPPTPYITSTLQQDAANKLHFSAMYTMKLAQRLYEGVQLSDGKAAGL 686

Query: 363  ITYIRTDGLHISDEACKDICSLVRERYGESFASDGARKYFKKVKNAQEAHEAIRPTNIRR 542
            ITY+RTDGLH+SDEA KDI SLV ERYG + ASDG RKYFKKVKNAQEAHEAIRPT+I+R
Sbjct: 687  ITYMRTDGLHVSDEAAKDIRSLVAERYGSNLASDGVRKYFKKVKNAQEAHEAIRPTDIQR 746

Query: 543  VPSSLAGVLDEDSLKLYTLIWSRALACQMEPAIYDQIQVDIGNAGRSIIFRSACSRTEFL 722
            +PS LAGVLDEDSLKLYTLIWSR +ACQMEPA  DQIQVDIGNA  S++FRS CS  EF 
Sbjct: 747  LPSMLAGVLDEDSLKLYTLIWSRTMACQMEPATIDQIQVDIGNANESVVFRSTCSGVEFF 806

Query: 723  GYQAAFEDVETRAIRNRDNEVNDRSDVSDVLSNLKAGDPLYLGKVEPKQHHTQPPPRFSE 902
            GYQA ++DVE +AIR  +NE N+R +V   LS+LKAGDPLYL  +E +QHHT PP R+SE
Sbjct: 807  GYQAVYKDVEAKAIRVDENEGNERGEVFKALSSLKAGDPLYLSLLELEQHHTLPPSRYSE 866

Query: 903  GSLVKSLEELGIGRPSTYASTMKVLQDRNYITVKSRILYPEFRGRMLSAFLSNHFSEVTD 1082
            G+LVK LEELGIGRPSTYA TMKVLQDRNY+TVK+R+LYPEFRGRM+SAFLS+HFSEVTD
Sbjct: 867  GALVKKLEELGIGRPSTYAITMKVLQDRNYVTVKNRVLYPEFRGRMVSAFLSHHFSEVTD 926

Query: 1083 YSFTADMETELDNVSAGLTEWKGLLGDYWTRFSKYCESTSNVHIHEVEKMLEKTFGDFLF 1262
            YSFTADMETELDNVSAGLTEWKGLL DYWTRFS YC   SNVHIH+VEKMLEK FGDFLF
Sbjct: 927  YSFTADMETELDNVSAGLTEWKGLLKDYWTRFSMYCNRVSNVHIHQVEKMLEKKFGDFLF 986

Query: 1263 TSLPNKSRTCPSCREGTLIFKVSRFGVGYFIGCDQHPRCKYIAKTIHGDDDDD 1421
            + LP+KSRTCPSC EGTLIFKVSRFG GYFIGCDQHP+CKYIAK + GDDD++
Sbjct: 987  SFLPDKSRTCPSCMEGTLIFKVSRFGSGYFIGCDQHPKCKYIAKMLDGDDDEE 1039


>emb|CAN67233.1| hypothetical protein VITISV_020021 [Vitis vinifera]
          Length = 1039

 Score =  697 bits (1799), Expect = 0.0
 Identities = 344/460 (74%), Positives = 386/460 (83%)
 Frame = +3

Query: 3    KPQEYWTLDVLFKEXXXXXXXXXXXXXXYLTHFQSKKLSKLSINSQTKAIDIQGEIEASE 182
            KPQEYWT++V F                YLTHF SKKL++ SI+S T+A  I+ EI + E
Sbjct: 581  KPQEYWTVEVEFNRKQGSSMNSKFFPS-YLTHFDSKKLNQFSISSHTEAKAIEQEINSLE 639

Query: 183  FEVSNTKRSKMRKNPPAPYITSSLQQDAANKLSFPATYTMKLAQKLYEGVQLPDGVSAGL 362
            F+V  +KR+KMRKNPP PYITS+LQQDAANKL F A YTMKLAQ+LYEGVQL DG +AGL
Sbjct: 640  FKVIGSKRNKMRKNPPTPYITSTLQQDAANKLHFSAMYTMKLAQRLYEGVQLSDGKAAGL 699

Query: 363  ITYIRTDGLHISDEACKDICSLVRERYGESFASDGARKYFKKVKNAQEAHEAIRPTNIRR 542
            ITY+RTDGLH+SDEA KDI SLV ERYG + ASDG RKYFKKVKNAQEAHEAIRPT+IRR
Sbjct: 700  ITYMRTDGLHVSDEAAKDIRSLVAERYGSNLASDGVRKYFKKVKNAQEAHEAIRPTDIRR 759

Query: 543  VPSSLAGVLDEDSLKLYTLIWSRALACQMEPAIYDQIQVDIGNAGRSIIFRSACSRTEFL 722
            +PS LAGVLDEDSLKLYTLIWSR +ACQMEPA  DQIQVDIGNA  S++FRS CS  EF 
Sbjct: 760  LPSMLAGVLDEDSLKLYTLIWSRTMACQMEPATIDQIQVDIGNANESVVFRSTCSGVEFF 819

Query: 723  GYQAAFEDVETRAIRNRDNEVNDRSDVSDVLSNLKAGDPLYLGKVEPKQHHTQPPPRFSE 902
            GYQA ++DVE +AIR  +NE N+R +V   LS+LKAGDPLYL  +E +QHHT PP R+SE
Sbjct: 820  GYQAVYKDVEAKAIRVDENEGNERGEVFKALSSLKAGDPLYLSLLELEQHHTLPPSRYSE 879

Query: 903  GSLVKSLEELGIGRPSTYASTMKVLQDRNYITVKSRILYPEFRGRMLSAFLSNHFSEVTD 1082
            G+LVK LEELGIGRPSTYA TMKVLQDRNY+TVK+R+LYPEFRGRM+SAFLS+HFSEVTD
Sbjct: 880  GALVKKLEELGIGRPSTYAITMKVLQDRNYVTVKNRVLYPEFRGRMVSAFLSHHFSEVTD 939

Query: 1083 YSFTADMETELDNVSAGLTEWKGLLGDYWTRFSKYCESTSNVHIHEVEKMLEKTFGDFLF 1262
            YSFTADMETELDNVSAGLTEWKGLL DYWTRFS YC   SNVHIH+VEKMLEK FGDFLF
Sbjct: 940  YSFTADMETELDNVSAGLTEWKGLLKDYWTRFSMYCNRVSNVHIHQVEKMLEKKFGDFLF 999

Query: 1263 TSLPNKSRTCPSCREGTLIFKVSRFGVGYFIGCDQHPRCK 1382
            + LP+KSRTCPSC EGTLIFKVSRFG GYFIGCDQHP+CK
Sbjct: 1000 SFLPDKSRTCPSCMEGTLIFKVSRFGSGYFIGCDQHPKCK 1039


>ref|XP_003545557.1| PREDICTED: DNA topoisomerase 1-like [Glycine max]
          Length = 1197

 Score =  668 bits (1723), Expect = 0.0
 Identities = 321/473 (67%), Positives = 388/473 (82%)
 Frame = +3

Query: 3    KPQEYWTLDVLFKEXXXXXXXXXXXXXXYLTHFQSKKLSKLSINSQTKAIDIQGEIEASE 182
            KP+EYWT++V  K+              +LTHF SKKL+K SI S T+A DI+  I +++
Sbjct: 576  KPKEYWTVEVQMKKKELRSNKNLTFPA-HLTHFDSKKLNKFSITSDTEARDIRSNINSAD 634

Query: 183  FEVSNTKRSKMRKNPPAPYITSSLQQDAANKLSFPATYTMKLAQKLYEGVQLPDGVSAGL 362
            F V + K++K R+NPP PYITS+LQQDAANKL F A++TMKLAQKLYEGV+L D V+ GL
Sbjct: 635  FHVVSLKKNKSRRNPPTPYITSTLQQDAANKLHFTASHTMKLAQKLYEGVELSDSVAVGL 694

Query: 363  ITYIRTDGLHISDEACKDICSLVRERYGESFASDGARKYFKKVKNAQEAHEAIRPTNIRR 542
            ITYIRTDGLHISDEA   I SL+ ERYG+ F S  A KY+KKVKNAQEAHEAIRPT+IR+
Sbjct: 695  ITYIRTDGLHISDEAVASIRSLIIERYGQDFVSQSAPKYYKKVKNAQEAHEAIRPTDIRK 754

Query: 543  VPSSLAGVLDEDSLKLYTLIWSRALACQMEPAIYDQIQVDIGNAGRSIIFRSACSRTEFL 722
            +PS L+ +LDE+SLKLYTLIWSR ++CQMEPA+++QIQ+DIGN   SII +S+ SR EF 
Sbjct: 755  LPSMLSAILDEESLKLYTLIWSRTVSCQMEPAVFEQIQLDIGNLDESIILQSSISRVEFP 814

Query: 723  GYQAAFEDVETRAIRNRDNEVNDRSDVSDVLSNLKAGDPLYLGKVEPKQHHTQPPPRFSE 902
            GY+A F D+ + A++++ ++ +       VL++LK GD L++ + EP QHHTQPPPR+SE
Sbjct: 815  GYRAVFTDIVSEAVQDKGSDESSHDQTFGVLNSLKTGDSLHVVQTEPNQHHTQPPPRYSE 874

Query: 903  GSLVKSLEELGIGRPSTYASTMKVLQDRNYITVKSRILYPEFRGRMLSAFLSNHFSEVTD 1082
             SLVK LEELGIGRPSTYAST+KVLQDRNY+TVKSR+L PEFRGRM+SAFLSNHFSEVTD
Sbjct: 875  ASLVKKLEELGIGRPSTYASTIKVLQDRNYVTVKSRVLSPEFRGRMVSAFLSNHFSEVTD 934

Query: 1083 YSFTADMETELDNVSAGLTEWKGLLGDYWTRFSKYCESTSNVHIHEVEKMLEKTFGDFLF 1262
            YSFTADMETELDNVSAGLTEWKGLL DYWTRF  YCE TSNVHIH+VEKMLEK FGD+LF
Sbjct: 935  YSFTADMETELDNVSAGLTEWKGLLRDYWTRFKSYCERTSNVHIHQVEKMLEKKFGDYLF 994

Query: 1263 TSLPNKSRTCPSCREGTLIFKVSRFGVGYFIGCDQHPRCKYIAKTIHGDDDDD 1421
             SLP++SR CPSC EGTLIFKVSRFG GYFIGCDQHPRCKYIAKT++G ++++
Sbjct: 995  ASLPDQSRVCPSCMEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYGTEEEE 1047


>ref|XP_003551158.1| PREDICTED: DNA topoisomerase 1-like [Glycine max]
          Length = 1070

 Score =  658 bits (1698), Expect = 0.0
 Identities = 317/473 (67%), Positives = 384/473 (81%)
 Frame = +3

Query: 3    KPQEYWTLDVLFKEXXXXXXXXXXXXXXYLTHFQSKKLSKLSINSQTKAIDIQGEIEASE 182
            KP+EYW ++V  K+              +LTHF SKKL++ SI S T+A DIQ  I +++
Sbjct: 449  KPKEYWIVEVQLKKKELRSNKNLTFPA-HLTHFDSKKLNQFSITSDTEARDIQSTINSAD 507

Query: 183  FEVSNTKRSKMRKNPPAPYITSSLQQDAANKLSFPATYTMKLAQKLYEGVQLPDGVSAGL 362
            F V + K+SK R+NPP PYITS+LQQDAANKL F A++TMKLAQKLYEGV+L DG++ GL
Sbjct: 508  FHVVSLKKSKSRRNPPTPYITSTLQQDAANKLHFTASHTMKLAQKLYEGVELSDGIAVGL 567

Query: 363  ITYIRTDGLHISDEACKDICSLVRERYGESFASDGARKYFKKVKNAQEAHEAIRPTNIRR 542
            ITYIRTDGLHISDE    I SL+ ERYG+ F S  A KY+KKVKNAQEAHEAIRPT+I +
Sbjct: 568  ITYIRTDGLHISDEVVASIRSLIIERYGQDFVSQSAPKYYKKVKNAQEAHEAIRPTDICK 627

Query: 543  VPSSLAGVLDEDSLKLYTLIWSRALACQMEPAIYDQIQVDIGNAGRSIIFRSACSRTEFL 722
            +PS L+G+LD +SLKLYTLIWSR ++CQM PA+++QIQ++IGN  +SII RS+ SR EF 
Sbjct: 628  LPSMLSGILDGESLKLYTLIWSRTVSCQMGPAVFEQIQLNIGNPDKSIILRSSSSRVEFP 687

Query: 723  GYQAAFEDVETRAIRNRDNEVNDRSDVSDVLSNLKAGDPLYLGKVEPKQHHTQPPPRFSE 902
            GY+A F D+ T A++++D++   R     VL++LK GDPL++ + EP QHHTQPPPR+SE
Sbjct: 688  GYRAVFTDIVTEAVQDKDSDEFSRDQTFGVLNSLKTGDPLHVVQTEPNQHHTQPPPRYSE 747

Query: 903  GSLVKSLEELGIGRPSTYASTMKVLQDRNYITVKSRILYPEFRGRMLSAFLSNHFSEVTD 1082
             SLVK LEELGIGRPSTYAST+KVLQDRNY+TVKSR+L PEFRG M+SAFLS+HFSEV D
Sbjct: 748  ASLVKKLEELGIGRPSTYASTIKVLQDRNYVTVKSRVLSPEFRGCMVSAFLSHHFSEVMD 807

Query: 1083 YSFTADMETELDNVSAGLTEWKGLLGDYWTRFSKYCESTSNVHIHEVEKMLEKTFGDFLF 1262
            Y FTADMETELDNVS GLTEWKGLL DYWTRF  YCE TSNVHIH+VEKMLEK FGD+LF
Sbjct: 808  YGFTADMETELDNVSGGLTEWKGLLRDYWTRFKSYCERTSNVHIHQVEKMLEKKFGDYLF 867

Query: 1263 TSLPNKSRTCPSCREGTLIFKVSRFGVGYFIGCDQHPRCKYIAKTIHGDDDDD 1421
             SLP++SR CPSC EGTLIFKVSRFG GYFIGCDQHPRCKYIAKT++G ++++
Sbjct: 868  ASLPDQSRVCPSCMEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYGTEEEE 920


>ref|NP_194849.3| DNA topoisomerase, type IA, core [Arabidopsis thaliana]
            gi|332660478|gb|AEE85878.1| DNA topoisomerase, type IA,
            core [Arabidopsis thaliana]
          Length = 1284

 Score =  641 bits (1653), Expect = 0.0
 Identities = 317/474 (66%), Positives = 377/474 (79%), Gaps = 1/474 (0%)
 Frame = +3

Query: 3    KPQEYWTLDVLFKEXXXXXXXXXXXXXXYLTHFQSKKLSKLSINSQTKAIDIQGEIEASE 182
            KPQEYWT+ +  K               +LT   SK+L++LSI+S+  A DI+  I++  
Sbjct: 662  KPQEYWTVGIKVK-----GKDNSATFSAHLTSLNSKRLNQLSISSEANAQDIEQRIKSEG 716

Query: 183  FEVSNTKRSKMRKNPPAPYITSSLQQDAANKLSFPATYTMKLAQKLYEGVQLPDGVSAGL 362
            F V  TK S  RKNPP PYITS+LQQDAANKL F   +TMKLAQKLYEGVQL DG SAGL
Sbjct: 717  FLVKGTKTSTTRKNPPTPYITSTLQQDAANKLHFSTAHTMKLAQKLYEGVQLSDGKSAGL 776

Query: 363  ITYIRTDGLHISDEACKDICSLVRERYGESFASDGARKYFKKVKNAQEAHEAIRPTNIRR 542
            ITY+RTDGLHI+DEA KDI SLV ERYG++F SD  RKYFKKVKNAQEAHEAIRPT+IRR
Sbjct: 777  ITYMRTDGLHIADEAIKDIQSLVAERYGKNFTSDSPRKYFKKVKNAQEAHEAIRPTDIRR 836

Query: 543  VPSSLAGVLDEDSLKLYTLIWSRALACQMEPAIYDQIQVDIGNAGRSIIFRSACSRTEFL 722
            +PS++A +LD DSLKLYTLIWSRA+ACQMEPA   QIQ+DIGNA  SIIFRS+CS+ EFL
Sbjct: 837  LPSTIASLLDADSLKLYTLIWSRAVACQMEPASIAQIQLDIGNASESIIFRSSCSKVEFL 896

Query: 723  GYQAAFEDVETRAIRNRDN-EVNDRSDVSDVLSNLKAGDPLYLGKVEPKQHHTQPPPRFS 899
            GYQA +ED E +AI+N DN + ++R +    LS+LK GD L +G+VE KQHHTQ PPR+S
Sbjct: 897  GYQAVYEDPEAKAIKNNDNDQSSEREETFKTLSSLKDGDLLQIGEVELKQHHTQHPPRYS 956

Query: 900  EGSLVKSLEELGIGRPSTYASTMKVLQDRNYITVKSRILYPEFRGRMLSAFLSNHFSEVT 1079
            EGSLVK LEELGIGRPSTYAS  +VLQ R Y+T+K+R+LYPEFR RM+SAFL+++F+E+T
Sbjct: 957  EGSLVKKLEELGIGRPSTYASIFRVLQHRKYVTIKNRVLYPEFRARMVSAFLTHYFTEIT 1016

Query: 1080 DYSFTADMETELDNVSAGLTEWKGLLGDYWTRFSKYCESTSNVHIHEVEKMLEKTFGDFL 1259
            DYSFTADMETELDNVS G+TEWKGLL DYWTRFS YC+   NV   +VEKMLEK + D L
Sbjct: 1017 DYSFTADMETELDNVSGGVTEWKGLLRDYWTRFSAYCKRVENVQRSQVEKMLEKKYEDVL 1076

Query: 1260 FTSLPNKSRTCPSCREGTLIFKVSRFGVGYFIGCDQHPRCKYIAKTIHGDDDDD 1421
            F+ LP  SRTCPSC EGTL FK S+FG GYFIGCDQHP CK+IAKT++G+D+D+
Sbjct: 1077 FSLLPYPSRTCPSCMEGTLSFKASKFGAGYFIGCDQHPSCKFIAKTLYGEDEDE 1130