BLASTX nr result
ID: Cnidium21_contig00011356
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cnidium21_contig00011356
(1623 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI27406.3| unnamed protein product [Vitis vinifera] 114 1e-41
ref|XP_002267299.2| PREDICTED: LOW QUALITY PROTEIN: putative pen... 114 9e-41
ref|XP_002316000.1| predicted protein [Populus trichocarpa] gi|2... 106 8e-38
ref|XP_002514579.1| pentatricopeptide repeat-containing protein,... 110 1e-37
ref|XP_004170808.1| PREDICTED: LOW QUALITY PROTEIN: putative pen... 100 2e-35
>emb|CBI27406.3| unnamed protein product [Vitis vinifera]
Length = 821
Score = 114 bits (286), Expect(4) = 1e-41
Identities = 57/90 (63%), Positives = 68/90 (75%)
Frame = -3
Query: 928 RSEMVQEAVAFLRETERKDTRTNVVSFNILMSRFSKLGYVDISKKKLCLMFKCGLLHDAY 749
R +Q+AV FLRET ++ +VVSFN LMS F K+G VD++K C+M K GLL D Y
Sbjct: 247 RQSRLQDAVTFLRETGGEEFGPSVVSFNALMSGFCKMGSVDVAKSFFCMMIKYGLLPDVY 306
Query: 748 SYNILIHGLWVAGSVEEALEFTNDMEKHGV 659
SYNIL+HGL VAGS+EEALEFTNDME HGV
Sbjct: 307 SYNILLHGLCVAGSMEEALEFTNDMENHGV 336
Score = 72.4 bits (176), Expect(4) = 1e-41
Identities = 42/113 (37%), Positives = 57/113 (50%), Gaps = 27/113 (23%)
Frame = -1
Query: 483 GLSTDIVTYNILVCGHCQVGNIDEGLKLHEEMLSQGMRXXXXXXXXXXXXLCK------- 325
GL+ D+VTY IL+CGHCQ+GNI+E KL E+MLSQG++ LCK
Sbjct: 370 GLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEA 429
Query: 324 --------------------KCEVRRAIQLY*EMCRK*VFPDAFSQRAILLAL 226
+ V AI+LY EMC K ++P++F AI+ L
Sbjct: 430 VILLHEMEVIGLKPDLLTYSRGAVEEAIELYEEMCSKRIYPNSFVCSAIISGL 482
Score = 30.8 bits (68), Expect(4) = 1e-41
Identities = 13/19 (68%), Positives = 17/19 (89%)
Frame = -2
Query: 542 GVRLLGMMSGAGKIVQRML 486
G R+LG++SGA K+VQRML
Sbjct: 349 GFRILGLISGAWKVVQRML 367
Score = 20.8 bits (42), Expect(4) = 1e-41
Identities = 7/13 (53%), Positives = 11/13 (84%)
Frame = -3
Query: 226 EKGTIADARYFFD 188
EKG I++A+ +FD
Sbjct: 484 EKGAISEAQMYFD 496
>ref|XP_002267299.2| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g13630-like [Vitis
vinifera]
Length = 829
Score = 114 bits (286), Expect(4) = 9e-41
Identities = 57/90 (63%), Positives = 68/90 (75%)
Frame = -3
Query: 928 RSEMVQEAVAFLRETERKDTRTNVVSFNILMSRFSKLGYVDISKKKLCLMFKCGLLHDAY 749
R +Q+AV FLRET ++ +VVSFN LMS F K+G VD++K C+M K GLL D Y
Sbjct: 247 RQSRLQDAVTFLRETGGEEFGPSVVSFNALMSGFCKMGSVDVAKSFFCMMIKYGLLPDVY 306
Query: 748 SYNILIHGLWVAGSVEEALEFTNDMEKHGV 659
SYNIL+HGL VAGS+EEALEFTNDME HGV
Sbjct: 307 SYNILLHGLCVAGSMEEALEFTNDMENHGV 336
Score = 69.7 bits (169), Expect(4) = 9e-41
Identities = 43/121 (35%), Positives = 58/121 (47%), Gaps = 35/121 (28%)
Frame = -1
Query: 483 GLSTDIVTYNILVCGHCQVGNIDEGLKLHEEMLSQGMRXXXXXXXXXXXXLCKK------ 322
GL+ D+VTY IL+CGHCQ+GNI+E KL E+MLSQG++ LCK
Sbjct: 370 GLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEA 429
Query: 321 --------------------------CE---VRRAIQLY*EMCRK*VFPDAFSQRAILLA 229
C+ V AI+LY EMC K ++P++F AI+
Sbjct: 430 VILLHEMEVIGLKPDLLTYSVLIHGLCKRGAVEEAIELYEEMCSKRIYPNSFVCSAIISG 489
Query: 228 L 226
L
Sbjct: 490 L 490
Score = 30.8 bits (68), Expect(4) = 9e-41
Identities = 13/19 (68%), Positives = 17/19 (89%)
Frame = -2
Query: 542 GVRLLGMMSGAGKIVQRML 486
G R+LG++SGA K+VQRML
Sbjct: 349 GFRILGLISGAWKVVQRML 367
Score = 20.8 bits (42), Expect(4) = 9e-41
Identities = 7/13 (53%), Positives = 11/13 (84%)
Frame = -3
Query: 226 EKGTIADARYFFD 188
EKG I++A+ +FD
Sbjct: 492 EKGAISEAQMYFD 504
>ref|XP_002316000.1| predicted protein [Populus trichocarpa] gi|222865040|gb|EEF02171.1|
predicted protein [Populus trichocarpa]
Length = 745
Score = 106 bits (265), Expect(4) = 8e-38
Identities = 51/85 (60%), Positives = 65/85 (76%)
Frame = -3
Query: 913 QEAVAFLRETERKDTRTNVVSFNILMSRFSKLGYVDISKKKLCLMFKCGLLHDAYSYNIL 734
++AV FLR+ + K+ +VVSFN +MSR+ KLG D++K C+M K G+L D YSYNIL
Sbjct: 167 RDAVLFLRQNDGKEFAPSVVSFNTIMSRYCKLGLADVAKSFFCMMLKYGILPDTYSYNIL 226
Query: 733 IHGLWVAGSVEEALEFTNDMEKHGV 659
IHGL VAGS+EEALE TNDMEK G+
Sbjct: 227 IHGLIVAGSMEEALELTNDMEKQGL 251
Score = 67.4 bits (163), Expect(4) = 8e-38
Identities = 41/127 (32%), Positives = 60/127 (47%), Gaps = 36/127 (28%)
Frame = -1
Query: 486 KGLSTDIVTYNILVCGHCQVGNIDEGLKLHEEMLSQGMRXXXXXXXXXXXXLCKKCEV-- 313
+GL D+VTY +L+CGHCQ+GNI+E L+L ++LS G + LCK+ +V
Sbjct: 285 EGLKPDLVTYTVLICGHCQMGNIEEALRLRRDLLSSGFQLNVILYSVLLSSLCKRGQVDE 344
Query: 312 ---------------------------------RRAIQLY*EMCRK*VFPDAFSQRAILL 232
++AIQLY EMC +FP++F+ IL
Sbjct: 345 ALQLLYEMEANNLQPDLVTYSILIHGLCKQGKVQQAIQLYKEMCFNRIFPNSFAHSGILK 404
Query: 231 AL-RKGL 214
L KG+
Sbjct: 405 GLCEKGM 411
Score = 28.5 bits (62), Expect(4) = 8e-38
Identities = 12/19 (63%), Positives = 16/19 (84%)
Frame = -2
Query: 542 GVRLLGMMSGAGKIVQRML 486
G LLG+MSGA +I+Q+ML
Sbjct: 264 GFHLLGLMSGAREIIQKML 282
Score = 23.5 bits (49), Expect(4) = 8e-38
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = -3
Query: 226 EKGTIADARYFFDRELSRN 170
EKG ++DAR +FD + N
Sbjct: 408 EKGMLSDARMYFDSLIMSN 426
>ref|XP_002514579.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223546183|gb|EEF47685.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 840
Score = 110 bits (274), Expect(3) = 1e-37
Identities = 52/90 (57%), Positives = 68/90 (75%)
Frame = -3
Query: 928 RSEMVQEAVAFLRETERKDTRTNVVSFNILMSRFSKLGYVDISKKKLCLMFKCGLLHDAY 749
R Q+AV F ++TE K+ + +VVSFN +MSR+ KLG+VD++K C+M K GLL DAY
Sbjct: 258 RQSRFQDAVLFFQDTEGKEFQPSVVSFNTIMSRYCKLGFVDVAKSFFCMMLKHGLLPDAY 317
Query: 748 SYNILIHGLWVAGSVEEALEFTNDMEKHGV 659
SYNILIHGL +AGS+ EAL+ NDME HG+
Sbjct: 318 SYNILIHGLCIAGSMGEALDLKNDMENHGL 347
Score = 68.2 bits (165), Expect(3) = 1e-37
Identities = 37/101 (36%), Positives = 56/101 (55%)
Frame = -1
Query: 486 KGLSTDIVTYNILVCGHCQVGNIDEGLKLHEEMLSQGMRXXXXXXXXXXXXLCKKCEVRR 307
KG + ++VTY +L+CGHCQ+GN++E LKL++EM+S G + LCK +V
Sbjct: 380 KGPNPNLVTYTVLICGHCQIGNVEEALKLYKEMISHGFQLSIISSTVLLGSLCKSRQVDV 439
Query: 306 AIQLY*EMCRK*VFPDAFSQRAILLALRKGL*QMQDIFLIE 184
A +L+ EM + PD + ++ L K Q I L E
Sbjct: 440 AFKLFCEMEANGLRPDLITYSTLIHGLCKQGEVQQAILLYE 480
Score = 27.3 bits (59), Expect(3) = 1e-37
Identities = 11/19 (57%), Positives = 16/19 (84%)
Frame = -2
Query: 542 GVRLLGMMSGAGKIVQRML 486
G RLLG+++GA I+Q+ML
Sbjct: 360 GFRLLGLINGAWNIIQKML 378
>ref|XP_004170808.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g13630-like [Cucumis
sativus]
Length = 830
Score = 100 bits (250), Expect(3) = 2e-35
Identities = 46/86 (53%), Positives = 68/86 (79%)
Frame = -3
Query: 916 VQEAVAFLRETERKDTRTNVVSFNILMSRFSKLGYVDISKKKLCLMFKCGLLHDAYSYNI 737
+++A++FL ++ K ++VS N +MS+F K+G +D+++ CLM K GLLHD++SYNI
Sbjct: 253 LEDAISFLHDSN-KVVGPSIVSINTIMSKFCKVGLIDVARSXFCLMVKNGLLHDSFSYNI 311
Query: 736 LIHGLWVAGSVEEALEFTNDMEKHGV 659
L+HGL VAGS++EAL FT+DMEKHGV
Sbjct: 312 LLHGLCVAGSMDEALGFTDDMEKHGV 337
Score = 67.8 bits (164), Expect(3) = 2e-35
Identities = 45/124 (36%), Positives = 59/124 (47%), Gaps = 35/124 (28%)
Frame = -1
Query: 486 KGLSTDIVTYNILVCGHCQVGNIDEGLKLHEEMLSQGMRXXXXXXXXXXXXLCK------ 325
+GL+ D+VTY L+CGHCQ+GNI+E LKL +E LS+G + LCK
Sbjct: 370 QGLNPDLVTYTTLICGHCQMGNIEEALKLRQETLSRGFKLNVIFYNMLLSCLCKVGRIEE 429
Query: 324 --------------------------KCE---VRRAIQLY*EMCRK*VFPDAFSQRAILL 232
C+ V+RA QLY +M K FP F+QRA+LL
Sbjct: 430 ALTLFDEMETLRLEPDFIVYSILIHGLCKEGFVQRAYQLYEQMRLKRKFPHHFAQRAVLL 489
Query: 231 ALRK 220
L K
Sbjct: 490 GLFK 493
Score = 29.3 bits (64), Expect(3) = 2e-35
Identities = 13/19 (68%), Positives = 16/19 (84%)
Frame = -2
Query: 542 GVRLLGMMSGAGKIVQRML 486
G LLG+MSGA K+VQ+ML
Sbjct: 350 GFLLLGLMSGARKVVQKML 368