BLASTX nr result

ID: Cnidium21_contig00011313 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00011313
         (1361 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002519856.1| Transmembrane protein 45a, putative [Ricinus...   424   e-116
ref|XP_002263042.2| PREDICTED: LOW QUALITY PROTEIN: transmembran...   423   e-116
emb|CAN68559.1| hypothetical protein VITISV_028486 [Vitis vinifera]   423   e-116
ref|XP_002303462.1| predicted protein [Populus trichocarpa] gi|2...   419   e-115
ref|XP_002326579.1| predicted protein [Populus trichocarpa] gi|2...   419   e-115

>ref|XP_002519856.1| Transmembrane protein 45a, putative [Ricinus communis]
            gi|223540902|gb|EEF42460.1| Transmembrane protein 45a,
            putative [Ricinus communis]
          Length = 278

 Score =  424 bits (1089), Expect = e-116
 Identities = 192/259 (74%), Positives = 230/259 (88%)
 Frame = -3

Query: 1071 MGSFPGHALPGTLFLCVGLWHIWCSIVRYVSNPGTFRVRVWHPVSGLDGRLRYLELYLIA 892
            MGSF GHALPG+LFL VG+WHIWCS+VRYVSNP  FRVRVW+PV G DG+L+YLELYL+A
Sbjct: 1    MGSFKGHALPGSLFLLVGMWHIWCSLVRYVSNPKAFRVRVWNPVPGFDGKLKYLELYLVA 60

Query: 891  IGAFADMCVELLYSTHLKFFTNGILNPHHMNDFEHGGMLLMFFIYSVVILLSEQTSFLPL 712
            +GAF D+C+ELLYSTHLKFF +G+LNP HMNDFEH GMLLMFFI+ VV LLSE+T FLPL
Sbjct: 61   VGAFIDLCIELLYSTHLKFFVDGVLNPSHMNDFEHSGMLLMFFIFGVVSLLSEKTRFLPL 120

Query: 711  PEGALCFIASTAFCAEYLLFYFHSTTHKGLEGHYHLLLVLVVAFCILSSVAGALMPTSFA 532
            PEGALC +A+TAFCAEYLLFYFHSTTHKGLEG+YHLLLVL++A CILS+VAG L+PTSF 
Sbjct: 121  PEGALCLVAATAFCAEYLLFYFHSTTHKGLEGYYHLLLVLLIALCILSTVAGTLLPTSFP 180

Query: 531  ADLSNGIALALQGLWFYQSAFTLYGPSMPKGCQLKENEISCISPDHEIRGQLLANFQLFS 352
             DLS+GIA+ LQGLWFYQ+AF+LYGP +P GCQLK ++++C S   ++RG+LLANFQLF+
Sbjct: 181  IDLSSGIAITLQGLWFYQTAFSLYGPMVPDGCQLKNDQVTCRSMASQVRGELLANFQLFA 240

Query: 351  IVFGLMVGVVGSYGFAAKR 295
            +V G++VGVV SYGFAA +
Sbjct: 241  LVLGVLVGVVVSYGFAASK 259


>ref|XP_002263042.2| PREDICTED: LOW QUALITY PROTEIN: transmembrane protein 45B-like [Vitis
            vinifera]
          Length = 278

 Score =  423 bits (1087), Expect = e-116
 Identities = 195/259 (75%), Positives = 226/259 (87%)
 Frame = -3

Query: 1071 MGSFPGHALPGTLFLCVGLWHIWCSIVRYVSNPGTFRVRVWHPVSGLDGRLRYLELYLIA 892
            MGSF GH LPGTLFL VGLWHIW ++VR+V NP  F+VRVW+PVSG DGRLRYLELY++A
Sbjct: 1    MGSFMGHVLPGTLFLAVGLWHIWSAVVRFVMNPKGFQVRVWNPVSGFDGRLRYLELYVVA 60

Query: 891  IGAFADMCVELLYSTHLKFFTNGILNPHHMNDFEHGGMLLMFFIYSVVILLSEQTSFLPL 712
            IGAF DMC+ELLYSTHL+FF NG+LNP HMNDFEH GMLLMFFI+ VV LLS+QT  +PL
Sbjct: 61   IGAFIDMCIELLYSTHLQFFVNGVLNPSHMNDFEHSGMLLMFFIFGVVALLSQQTGLVPL 120

Query: 711  PEGALCFIASTAFCAEYLLFYFHSTTHKGLEGHYHLLLVLVVAFCILSSVAGALMPTSFA 532
            PEGALC IA+TAF AEY LFYFHSTTHKGLEG+YHLLLV+++  CILS++ GALMPTSF 
Sbjct: 121  PEGALCLIAATAFSAEYFLFYFHSTTHKGLEGYYHLLLVILIGLCILSTIFGALMPTSFP 180

Query: 531  ADLSNGIALALQGLWFYQSAFTLYGPSMPKGCQLKENEISCISPDHEIRGQLLANFQLFS 352
             DL  GIA+ALQGLWFYQ+AFTLYGP MP+GC+LKEN ISC SP++++RG+LLANFQLF 
Sbjct: 181  VDLCCGIAIALQGLWFYQTAFTLYGPMMPEGCRLKENMISCHSPEYQVRGELLANFQLFI 240

Query: 351  IVFGLMVGVVGSYGFAAKR 295
            I FG++V VVGSYGFAA R
Sbjct: 241  IAFGVLVAVVGSYGFAASR 259


>emb|CAN68559.1| hypothetical protein VITISV_028486 [Vitis vinifera]
          Length = 301

 Score =  423 bits (1087), Expect = e-116
 Identities = 195/259 (75%), Positives = 226/259 (87%)
 Frame = -3

Query: 1071 MGSFPGHALPGTLFLCVGLWHIWCSIVRYVSNPGTFRVRVWHPVSGLDGRLRYLELYLIA 892
            MGSF GH LPGTLFL VGLWHIW ++VR+V NP  F+VRVW+PVSG DGRLRYLELY++A
Sbjct: 1    MGSFMGHVLPGTLFLAVGLWHIWSAVVRFVMNPKGFQVRVWNPVSGFDGRLRYLELYVVA 60

Query: 891  IGAFADMCVELLYSTHLKFFTNGILNPHHMNDFEHGGMLLMFFIYSVVILLSEQTSFLPL 712
            IGAF DMC+ELLYSTHL+FF NG+LNP HMNDFEH GMLLMFFI+ VV LLS+QT  +PL
Sbjct: 61   IGAFIDMCIELLYSTHLQFFVNGVLNPSHMNDFEHSGMLLMFFIFGVVALLSQQTGLVPL 120

Query: 711  PEGALCFIASTAFCAEYLLFYFHSTTHKGLEGHYHLLLVLVVAFCILSSVAGALMPTSFA 532
            PEGALC IA+TAF AEY LFYFHSTTHKGLEG+YHLLLV+++  CILS++ GALMPTSF 
Sbjct: 121  PEGALCLIAATAFSAEYFLFYFHSTTHKGLEGYYHLLLVILIGLCILSTIFGALMPTSFP 180

Query: 531  ADLSNGIALALQGLWFYQSAFTLYGPSMPKGCQLKENEISCISPDHEIRGQLLANFQLFS 352
             DL  GIA+ALQGLWFYQ+AFTLYGP MP+GC+LKEN ISC SP++++RG+LLANFQLF 
Sbjct: 181  VDLCCGIAIALQGLWFYQTAFTLYGPMMPEGCRLKENMISCHSPEYQVRGELLANFQLFI 240

Query: 351  IVFGLMVGVVGSYGFAAKR 295
            I FG++V VVGSYGFAA R
Sbjct: 241  IAFGVLVAVVGSYGFAASR 259


>ref|XP_002303462.1| predicted protein [Populus trichocarpa] gi|222840894|gb|EEE78441.1|
            predicted protein [Populus trichocarpa]
          Length = 276

 Score =  419 bits (1078), Expect = e-115
 Identities = 196/259 (75%), Positives = 223/259 (86%)
 Frame = -3

Query: 1071 MGSFPGHALPGTLFLCVGLWHIWCSIVRYVSNPGTFRVRVWHPVSGLDGRLRYLELYLIA 892
            MGSF GHALPGTLFL VG+WHIW S+VRYVSNP +FRVRVW+PV G DG+L YLELYL+A
Sbjct: 1    MGSFIGHALPGTLFLLVGVWHIWSSLVRYVSNPKSFRVRVWNPVPGFDGKLEYLELYLVA 60

Query: 891  IGAFADMCVELLYSTHLKFFTNGILNPHHMNDFEHGGMLLMFFIYSVVILLSEQTSFLPL 712
             GAF DMC+E+LYSTHLKFF NG+LNPHHMNDFEHGGMLLMFFI+ VV LLSE+T FLPL
Sbjct: 61   GGAFIDMCIEVLYSTHLKFFINGVLNPHHMNDFEHGGMLLMFFIFGVVSLLSEKTRFLPL 120

Query: 711  PEGALCFIASTAFCAEYLLFYFHSTTHKGLEGHYHLLLVLVVAFCILSSVAGALMPTSFA 532
            PEGALC +A+ AF AEYLLFYFHSTTHKGLEGHYHLLLVL++  C+LS  AGAL+ TSF 
Sbjct: 121  PEGALCLVAAAAFSAEYLLFYFHSTTHKGLEGHYHLLLVLLIGLCVLSVAAGALLRTSFP 180

Query: 531  ADLSNGIALALQGLWFYQSAFTLYGPSMPKGCQLKENEISCISPDHEIRGQLLANFQLFS 352
             DLS+GIA+ LQGLWFYQ+AFTLYGP MP GCQLK ++I C S D  +RG+LLANFQLFS
Sbjct: 181  VDLSSGIAITLQGLWFYQTAFTLYGPMMPNGCQLKGDQIVCRSSDSLVRGELLANFQLFS 240

Query: 351  IVFGLMVGVVGSYGFAAKR 295
            +VFG++V V  SYGFAA R
Sbjct: 241  LVFGVLVTVAASYGFAASR 259


>ref|XP_002326579.1| predicted protein [Populus trichocarpa] gi|222833901|gb|EEE72378.1|
            predicted protein [Populus trichocarpa]
          Length = 265

 Score =  419 bits (1077), Expect = e-115
 Identities = 193/259 (74%), Positives = 223/259 (86%)
 Frame = -3

Query: 1071 MGSFPGHALPGTLFLCVGLWHIWCSIVRYVSNPGTFRVRVWHPVSGLDGRLRYLELYLIA 892
            MGSF GHALPGTLFL VG+WHIW S+VRY+SNP +FRVRVW+PV G DG+L+YLELYL+A
Sbjct: 1    MGSFKGHALPGTLFLLVGVWHIWSSLVRYLSNPKSFRVRVWNPVPGFDGKLKYLELYLVA 60

Query: 891  IGAFADMCVELLYSTHLKFFTNGILNPHHMNDFEHGGMLLMFFIYSVVILLSEQTSFLPL 712
             GAF DMC+ELLYSTHLKFF NG+LNPHHMNDFEHGGMLLMFFI+  V LLSE+TSFLPL
Sbjct: 61   GGAFIDMCIELLYSTHLKFFVNGVLNPHHMNDFEHGGMLLMFFIFGAVGLLSEKTSFLPL 120

Query: 711  PEGALCFIASTAFCAEYLLFYFHSTTHKGLEGHYHLLLVLVVAFCILSSVAGALMPTSFA 532
            PEG LC +A+ AF AEYLLFYFHSTTHKGLEGHYHLLLVL++  C+LS V GAL+PT+F 
Sbjct: 121  PEGVLCLVAAAAFSAEYLLFYFHSTTHKGLEGHYHLLLVLLIGLCVLSIVTGALLPTNFP 180

Query: 531  ADLSNGIALALQGLWFYQSAFTLYGPSMPKGCQLKENEISCISPDHEIRGQLLANFQLFS 352
             DLS+GIA+ LQGLWFYQ+AF LYGP MP GCQLK N+I C S + +IRG+LLA FQLFS
Sbjct: 181  VDLSSGIAMTLQGLWFYQTAFCLYGPMMPDGCQLKGNQIMCRSSESQIRGELLATFQLFS 240

Query: 351  IVFGLMVGVVGSYGFAAKR 295
            +VFG++V V  +YGFAA R
Sbjct: 241  MVFGVLVAVAAAYGFAASR 259


Top