BLASTX nr result
ID: Cnidium21_contig00011274
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cnidium21_contig00011274
(1164 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002282572.2| PREDICTED: uncharacterized RNA-binding prote... 479 e-133
ref|XP_002307266.1| predicted protein [Populus trichocarpa] gi|2... 452 e-125
ref|XP_002310138.1| predicted protein [Populus trichocarpa] gi|2... 450 e-124
ref|XP_002523592.1| RNA-binding protein, putative [Ricinus commu... 444 e-122
ref|XP_003517301.1| PREDICTED: DAZ-associated protein 1-like [Gl... 432 e-119
>ref|XP_002282572.2| PREDICTED: uncharacterized RNA-binding protein C660.15-like isoform
1 [Vitis vinifera] gi|359480890|ref|XP_003632540.1|
PREDICTED: uncharacterized RNA-binding protein
C660.15-like isoform 2 [Vitis vinifera]
gi|296082418|emb|CBI21423.3| unnamed protein product
[Vitis vinifera]
Length = 359
Score = 479 bits (1232), Expect = e-133
Identities = 236/298 (79%), Positives = 257/298 (86%)
Frame = +1
Query: 4 RMLEVKVATPKEVMRAPPSKKVTRIFVARIPPSVMEETFRSYFEKYGEITDLYMPKEPST 183
RMLEVKVATPKE M P KKVTRIFVARIP SV E FRSYFE YGEITDLYMPK+ +
Sbjct: 70 RMLEVKVATPKEEMMRAPIKKVTRIFVARIPDSVNEAAFRSYFETYGEITDLYMPKDHGS 129
Query: 184 KGHRGIGFITFANAESVDDLMAETHELGGSTIVVDRATPKEEEFRPASRVSRGPQGGYGA 363
KGHRGIGFITFA+AESVD+LM ETHELGGS +VVDRATPKEEEFRP SRV PQGGYGA
Sbjct: 130 KGHRGIGFITFASAESVDNLMVETHELGGSAVVVDRATPKEEEFRPVSRV---PQGGYGA 186
Query: 364 YSSYITSATRYAALGAPTMYDRPGSMYSRRESTRGMGKKIFVGRLPQEANVEDLRHYFGR 543
Y++YIT+ATRYAALGAPT+YD PGS+Y R ESTR MGKKIFVGRLPQEA+ EDLR YFGR
Sbjct: 187 YNAYITAATRYAALGAPTLYDHPGSVYGRGESTRAMGKKIFVGRLPQEASAEDLRQYFGR 246
Query: 544 FGRVSDVYVPKDPRRSGHRGFGFVTFDEDGVAERVSRRQHEICGQQVAIDSATPVEDSSP 723
FGR+ DVYVPKDP+RSGHRGFGFVTF EDGVA+RVSRR HEICGQQVAIDSATP++D+
Sbjct: 247 FGRILDVYVPKDPKRSGHRGFGFVTFAEDGVADRVSRRSHEICGQQVAIDSATPLDDAGS 306
Query: 724 RGNFPMDEPEPFLGYGGPMRAYGSAYGRMYGSLDFNDWSGYGLGGGRPTRADMRYRPY 897
GNF MD EPF G+GGPMR YGRMYGSLDF+DW GYG+GGGRP+RAD RYRPY
Sbjct: 307 SGNFMMDSAEPFGGFGGPMR----TYGRMYGSLDFDDW-GYGIGGGRPSRADWRYRPY 359
Score = 112 bits (281), Expect = 1e-22
Identities = 83/271 (30%), Positives = 113/271 (41%), Gaps = 3/271 (1%)
Frame = +1
Query: 73 RIFVARIPPSVMEETFRSYFEKYGEITDLYMPKEPSTKGHRGIGFITFANAESVDDLMAE 252
++ V IP V + R Y K+GE+ D+ + KE ST RG G++TF + E +++
Sbjct: 4 KLVVLGIPWDVDTDGLRDYMSKFGELKDVIVMKERSTGRSRGFGYVTFGSVEDAKKVLSS 63
Query: 253 THELGGSTIVVDRATPKEEEFR-PASRVSRGPQGGYGAYSSYITSATRYAALGAPTMYDR 429
H LG + V ATPKEE R P +V+R
Sbjct: 64 EHFLGNRMLEVKVATPKEEMMRAPIKKVTR------------------------------ 93
Query: 430 PGSMYSRRESTRGMGKKIFVGRLPQEANVEDLRHYFGRFGRVSDVYVPKDPRRSGHRGFG 609
IFV R+P N R YF +G ++D+Y+PKD GHRG G
Sbjct: 94 -----------------IFVARIPDSVNEAAFRSYFETYGEITDLYMPKDHGSKGHRGIG 136
Query: 610 FVTFDEDGVAERVSRRQHEICGQQVAIDSATPVEDSSPRGNFPMDEPEPFLGYGGPMRAY 789
F+TF + + HE+ G V +D ATP E+ F P GYG AY
Sbjct: 137 FITFASAESVDNLMVETHELGGSAVVVDRATPKEE-----EFRPVSRVPQGGYGA-YNAY 190
Query: 790 GSAYGR--MYGSLDFNDWSGYGLGGGRPTRA 876
+A R G+ D G G G TRA
Sbjct: 191 ITAATRYAALGAPTLYDHPGSVYGRGESTRA 221
>ref|XP_002307266.1| predicted protein [Populus trichocarpa] gi|222856715|gb|EEE94262.1|
predicted protein [Populus trichocarpa]
Length = 367
Score = 452 bits (1163), Expect = e-125
Identities = 223/307 (72%), Positives = 256/307 (83%), Gaps = 9/307 (2%)
Frame = +1
Query: 4 RMLEVKVATPKEVMRAPPSKKVTRIFVARIPPSVMEETFRSYFEKYGEITDLYMPKEPST 183
RMLE+KVATPKE MRAP +KK TRIFVARIPPSV E TFRS+FEKYGEI DLYMPK+ S+
Sbjct: 70 RMLEIKVATPKEEMRAP-TKKATRIFVARIPPSVTETTFRSHFEKYGEIIDLYMPKDHSS 128
Query: 184 KGHRGIGFITFANAESVDDLMAETHELGGSTIVVDRATPKEEEFRPASRVSRGPQGGYGA 363
K HRGIGFIT+A+A+SVD LMAETHELGGST+VVDRATPKE++FRP +R + GGYGA
Sbjct: 129 KAHRGIGFITYASADSVDSLMAETHELGGSTVVVDRATPKEDDFRPIARTA---PGGYGA 185
Query: 364 YSSYITSATRYAALGAPTMYDRPGSMYSRRESTRGMGKKIFVGRLPQEANVEDLRHYFGR 543
Y++YI++ATRYAALGAPT+YD PG Y R ES+RGMGKKIFVGRLPQEA+ EDLR YFGR
Sbjct: 186 YNAYISAATRYAALGAPTLYDHPGPFYGRGESSRGMGKKIFVGRLPQEASTEDLRQYFGR 245
Query: 544 FGRVSDVYVPKDPRRSGHRGFGFVTFDEDGVAERVSRRQHEICGQQVAIDSATPVEDSSP 723
FG + DVYVPKDP+R+GHRGFGFVTF EDGVA+RVSRR HEICG QVAIDSATP++D+ P
Sbjct: 246 FGHIIDVYVPKDPKRTGHRGFGFVTFAEDGVADRVSRRSHEICGHQVAIDSATPIDDAGP 305
Query: 724 RGNFPMDEPEPFLGYGGPMRAYGSAYGRMYGSLDFND---------WSGYGLGGGRPTRA 876
GNF M PEPF GYGGPMR +GRMYG+LD++D W GYG+G RP+RA
Sbjct: 306 SGNFMMSAPEPFGGYGGPMR----NFGRMYGTLDYDDAGAYMVPSKW-GYGMGSARPSRA 360
Query: 877 DMRYRPY 897
D RYRPY
Sbjct: 361 DWRYRPY 367
Score = 102 bits (253), Expect = 2e-19
Identities = 74/269 (27%), Positives = 108/269 (40%), Gaps = 2/269 (0%)
Frame = +1
Query: 73 RIFVARIPPSVMEETFRSYFEKYGEITDLYMPKEPSTKGHRGIGFITFANAESVDDLMAE 252
++ + IP + E R Y K+GE+ D + KE S+ RG G++TF +AE +++
Sbjct: 4 KLVILGIPWEIDTEGLRQYMSKFGELEDCIVMKERSSGRSRGFGYVTFVSAEDAKAVLSG 63
Query: 253 THELGGSTIVVDRATPKEEEFRPASRVSRGPQGGYGAYSSYITSATRYAALGAPTMYDRP 432
H LG + + ATPKEE P + +R
Sbjct: 64 EHFLGKRMLEIKVATPKEEMRAPTKKATR------------------------------- 92
Query: 433 GSMYSRRESTRGMGKKIFVGRLPQEANVEDLRHYFGRFGRVSDVYVPKDPRRSGHRGFGF 612
IFV R+P R +F ++G + D+Y+PKD HRG GF
Sbjct: 93 ----------------IFVARIPPSVTETTFRSHFEKYGEIIDLYMPKDHSSKAHRGIGF 136
Query: 613 VTFDEDGVAERVSRRQHEICGQQVAIDSATPVEDSSPRGNFPMDEPEPFLGYGGPMRAYG 792
+T+ + + HE+ G V +D ATP ED P+ P G G AY
Sbjct: 137 ITYASADSVDSLMAETHELGGSTVVVDRATPKEDDFR----PIARTAP--GGYGAYNAYI 190
Query: 793 SAYGR--MYGSLDFNDWSGYGLGGGRPTR 873
SA R G+ D G G G +R
Sbjct: 191 SAATRYAALGAPTLYDHPGPFYGRGESSR 219
>ref|XP_002310138.1| predicted protein [Populus trichocarpa] gi|222853041|gb|EEE90588.1|
predicted protein [Populus trichocarpa]
Length = 367
Score = 450 bits (1157), Expect = e-124
Identities = 223/306 (72%), Positives = 255/306 (83%), Gaps = 8/306 (2%)
Frame = +1
Query: 4 RMLEVKVATPKEVMRAPPSKKVTRIFVARIPPSVMEETFRSYFEKYGEITDLYMPKEPST 183
RMLEVKVATPKE MRAP SKK TRIFVARIPPSV E TFRS+FEKYGEI DLYMPK+ S+
Sbjct: 70 RMLEVKVATPKEEMRAP-SKKATRIFVARIPPSVTETTFRSHFEKYGEIIDLYMPKDHSS 128
Query: 184 KGHRGIGFITFANAESVDDLMAETHELGGSTIVVDRATPKEEEFRPASRVSRGPQGGYGA 363
K HRGIGFIT+A+A+SVD+LMAETHELGGST+VVDRATPKE++FRP R++ GGYGA
Sbjct: 129 KAHRGIGFITYASADSVDNLMAETHELGGSTVVVDRATPKEDDFRPNGRMA---PGGYGA 185
Query: 364 YSSYITSATRYAALGAPTMYDRPGSMYSRRESTRGMGKKIFVGRLPQEANVEDLRHYFGR 543
Y++YI++ATRYAALGAPT+YD PG Y R ES+RGMGKKIFVGRLPQEA+ EDLR YFGR
Sbjct: 186 YNAYISAATRYAALGAPTLYDHPGPFYGRGESSRGMGKKIFVGRLPQEASAEDLRQYFGR 245
Query: 544 FGRVSDVYVPKDPRRSGHRGFGFVTFDEDGVAERVSRRQHEICGQQVAIDSATPVEDSSP 723
FG + DVYVPKDP+R+GHRGFGFVTF EDGVA+RVSRR HEICG QVAIDSATP++D+ P
Sbjct: 246 FGHILDVYVPKDPKRTGHRGFGFVTFAEDGVADRVSRRSHEICGHQVAIDSATPIDDAGP 305
Query: 724 RGNFPMDEPEPFLGYGGPMRAYGSAYGRMYGSLDFNDWS--------GYGLGGGRPTRAD 879
GNF M PEPF Y GPMR +GRMYG+LD++D S GYG+G RP+RAD
Sbjct: 306 SGNFMMSGPEPFGSYAGPMR----NFGRMYGTLDYDDASAYMVPSKWGYGMGSARPSRAD 361
Query: 880 MRYRPY 897
RYRPY
Sbjct: 362 WRYRPY 367
Score = 102 bits (253), Expect = 2e-19
Identities = 76/270 (28%), Positives = 108/270 (40%), Gaps = 3/270 (1%)
Frame = +1
Query: 73 RIFVARIPPSVMEETFRSYFEKYGEITDLYMPKEPSTKGHRGIGFITFANAESVDDLMAE 252
++ V IP + E R Y K+G + D + KE S+ RG G++TF +AE +++
Sbjct: 4 KLVVLGIPWEIDTEGLREYMTKFGGLEDCIVMKERSSGRSRGFGYVTFVSAEDAKAVLSS 63
Query: 253 THELGGSTIVVDRATPKEEEFRPASRVSRGPQGGYGAYSSYITSATRYAALGAPTMYDRP 432
H LG + V ATPKEE P+ + +R
Sbjct: 64 EHFLGKRMLEVKVATPKEEMRAPSKKATR------------------------------- 92
Query: 433 GSMYSRRESTRGMGKKIFVGRLPQEANVEDLRHYFGRFGRVSDVYVPKDPRRSGHRGFGF 612
IFV R+P R +F ++G + D+Y+PKD HRG GF
Sbjct: 93 ----------------IFVARIPPSVTETTFRSHFEKYGEIIDLYMPKDHSSKAHRGIGF 136
Query: 613 VTFDEDGVAERVSRRQHEICGQQVAIDSATPVEDS-SPRGNFPMDEPEPFLGYGGPMRAY 789
+T+ + + HE+ G V +D ATP ED P G GYG AY
Sbjct: 137 ITYASADSVDNLMAETHELGGSTVVVDRATPKEDDFRPNGRMAPG------GYGA-YNAY 189
Query: 790 GSAYGR--MYGSLDFNDWSGYGLGGGRPTR 873
SA R G+ D G G G +R
Sbjct: 190 ISAATRYAALGAPTLYDHPGPFYGRGESSR 219
>ref|XP_002523592.1| RNA-binding protein, putative [Ricinus communis]
gi|223537154|gb|EEF38787.1| RNA-binding protein,
putative [Ricinus communis]
Length = 359
Score = 444 bits (1141), Expect = e-122
Identities = 215/298 (72%), Positives = 249/298 (83%)
Frame = +1
Query: 4 RMLEVKVATPKEVMRAPPSKKVTRIFVARIPPSVMEETFRSYFEKYGEITDLYMPKEPST 183
RMLEVKVATPK+ P+KKVTRIFVARIPPSV E TFRS+FEKYGEI DLYMPK+ S+
Sbjct: 70 RMLEVKVATPKQEEMRAPAKKVTRIFVARIPPSVTETTFRSHFEKYGEIIDLYMPKDHSS 129
Query: 184 KGHRGIGFITFANAESVDDLMAETHELGGSTIVVDRATPKEEEFRPASRVSRGPQGGYGA 363
K HRGIGFITFA+A+SVD LMA+THELGGST+VVDRATPKE++FRP R++ G GYGA
Sbjct: 130 KAHRGIGFITFASADSVDSLMADTHELGGSTVVVDRATPKEDDFRPVGRMAHG---GYGA 186
Query: 364 YSSYITSATRYAALGAPTMYDRPGSMYSRRESTRGMGKKIFVGRLPQEANVEDLRHYFGR 543
Y++YI++ATRYAALGAPT+YD PG MY E RG+GKKIFVGRLPQEA EDLR YFGR
Sbjct: 187 YNAYISAATRYAALGAPTLYDHPGPMYGTGEPARGVGKKIFVGRLPQEATPEDLRQYFGR 246
Query: 544 FGRVSDVYVPKDPRRSGHRGFGFVTFDEDGVAERVSRRQHEICGQQVAIDSATPVEDSSP 723
FG + DVYVPKDP+R+GHRGFGFVTF E+GVA+RVSRR HEICG QVAIDSATP++D+ P
Sbjct: 247 FGHILDVYVPKDPKRTGHRGFGFVTFAEEGVADRVSRRSHEICGHQVAIDSATPIDDAGP 306
Query: 724 RGNFPMDEPEPFLGYGGPMRAYGSAYGRMYGSLDFNDWSGYGLGGGRPTRADMRYRPY 897
GNF M+ F GYGGP+R +GRMYGSLD++DW GYG+G RP+RAD RYRPY
Sbjct: 307 SGNFMMNAAPSFGGYGGPLR----NFGRMYGSLDYDDW-GYGMGSARPSRADWRYRPY 359
Score = 112 bits (279), Expect = 2e-22
Identities = 84/271 (30%), Positives = 112/271 (41%), Gaps = 4/271 (1%)
Frame = +1
Query: 73 RIFVARIPPSVMEETFRSYFEKYGEITDLYMPKEPSTKGHRGIGFITFANAESVDDLMAE 252
++ V IP V E R Y K+GE+ D + KE S+ RG G++TFA+AE ++
Sbjct: 4 KLVVLGIPWEVDTEGLREYMTKFGELDDCIVMKERSSGRSRGFGYVTFASAEDAKSALSS 63
Query: 253 THELGGSTIVVDRATPKEEEFR-PASRVSRGPQGGYGAYSSYITSATRYAALGAPTMYDR 429
H LG + V ATPK+EE R PA +V+R
Sbjct: 64 EHFLGNRMLEVKVATPKQEEMRAPAKKVTR------------------------------ 93
Query: 430 PGSMYSRRESTRGMGKKIFVGRLPQEANVEDLRHYFGRFGRVSDVYVPKDPRRSGHRGFG 609
IFV R+P R +F ++G + D+Y+PKD HRG G
Sbjct: 94 -----------------IFVARIPPSVTETTFRSHFEKYGEIIDLYMPKDHSSKAHRGIG 136
Query: 610 FVTFDEDGVAERVSRRQHEICGQQVAIDSATPVEDS-SPRGNFPMDEPEPFLGYGGPMRA 786
F+TF + + HE+ G V +D ATP ED P G GYG A
Sbjct: 137 FITFASADSVDSLMADTHELGGSTVVVDRATPKEDDFRPVGRMAHG------GYGA-YNA 189
Query: 787 YGSAYGR--MYGSLDFNDWSGYGLGGGRPTR 873
Y SA R G+ D G G G P R
Sbjct: 190 YISAATRYAALGAPTLYDHPGPMYGTGEPAR 220
>ref|XP_003517301.1| PREDICTED: DAZ-associated protein 1-like [Glycine max]
Length = 362
Score = 432 bits (1111), Expect = e-119
Identities = 215/300 (71%), Positives = 252/300 (84%), Gaps = 2/300 (0%)
Frame = +1
Query: 4 RMLEVKVATPKEVMRAPPSKKVTRIFVARIPPSVMEETFRSYFEKYGEITDLYMPKEPST 183
R LEVKVATPKE MRAP KKVTRIFVARIP SV E TFRS+FEKYGEITDLYMPK+ +
Sbjct: 71 RTLEVKVATPKEEMRAPV-KKVTRIFVARIPQSVTEATFRSHFEKYGEITDLYMPKDQGS 129
Query: 184 KGHRGIGFITFANAESVDDLMAETHELGGSTIVVDRATPKEEEFRPASRVSRGP--QGGY 357
K HRGIGFITFA+A+SV++LM+ETHELGGS +VVDRATPK+++F+P R+ P QGGY
Sbjct: 130 KMHRGIGFITFASADSVENLMSETHELGGSAVVVDRATPKDDDFKPIGRMPLPPPTQGGY 189
Query: 358 GAYSSYITSATRYAALGAPTMYDRPGSMYSRRESTRGMGKKIFVGRLPQEANVEDLRHYF 537
GAY++YI++ATRYAALGAPT+YD+PG +Y R + +R KKIFVGRLP EA +DLR YF
Sbjct: 190 GAYNAYISAATRYAALGAPTLYDQPGPIYGRGDPSRRTSKKIFVGRLPPEATSDDLRQYF 249
Query: 538 GRFGRVSDVYVPKDPRRSGHRGFGFVTFDEDGVAERVSRRQHEICGQQVAIDSATPVEDS 717
GRFGR+ DVYVP+DP+R+GHRGFGFVTF EDGVA+RVSRR HEICG QVAIDSATPV+D+
Sbjct: 250 GRFGRILDVYVPRDPKRTGHRGFGFVTFAEDGVADRVSRRSHEICGHQVAIDSATPVDDA 309
Query: 718 SPRGNFPMDEPEPFLGYGGPMRAYGSAYGRMYGSLDFNDWSGYGLGGGRPTRADMRYRPY 897
P GNF M+ E F GYGGP+R +YGRMYGSLDF+DW GYG+ GRP+RAD RYRPY
Sbjct: 310 GPSGNFMMNSMESFGGYGGPVR----SYGRMYGSLDFDDW-GYGI--GRPSRADWRYRPY 362
Score = 125 bits (313), Expect = 3e-26
Identities = 84/270 (31%), Positives = 117/270 (43%), Gaps = 3/270 (1%)
Frame = +1
Query: 73 RIFVARIPPSVMEETFRSYFEKYGEITDLYMPKEPSTKGHRGIGFITFANAESVDDLMAE 252
++ V IP + E R Y K+GE+ D + KE ST RG G++TFA+ + ++++
Sbjct: 5 KLVVLGIPWDIDTEGLREYMSKFGELEDCIVMKERSTGRSRGFGYVTFASVDDAKEVLSS 64
Query: 253 THELGGSTIVVDRATPKEEEFRPASRVSRGPQGGYGAYSSYITSATRYAALGAPTMYDRP 432
H LG T+ V ATPKEE P +V+R
Sbjct: 65 EHILGNRTLEVKVATPKEEMRAPVKKVTR------------------------------- 93
Query: 433 GSMYSRRESTRGMGKKIFVGRLPQEANVEDLRHYFGRFGRVSDVYVPKDPRRSGHRGFGF 612
IFV R+PQ R +F ++G ++D+Y+PKD HRG GF
Sbjct: 94 ----------------IFVARIPQSVTEATFRSHFEKYGEITDLYMPKDQGSKMHRGIGF 137
Query: 613 VTFDEDGVAERVSRRQHEICGQQVAIDSATPVEDS-SPRGNFPMDEPEPFLGYGGPMRAY 789
+TF E + HE+ G V +D ATP +D P G P+ P P G G AY
Sbjct: 138 ITFASADSVENLMSETHELGGSAVVVDRATPKDDDFKPIGRMPL--PPPTQGGYGAYNAY 195
Query: 790 GSAYGR--MYGSLDFNDWSGYGLGGGRPTR 873
SA R G+ D G G G P+R
Sbjct: 196 ISAATRYAALGAPTLYDQPGPIYGRGDPSR 225