BLASTX nr result

ID: Cnidium21_contig00011263 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00011263
         (253 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004141672.1| PREDICTED: charged multivesicular body prote...   125   3e-27
ref|NP_565053.1| SNF7-like protein [Arabidopsis thaliana] gi|297...   123   1e-26
gb|AAM61431.1| developmental protein, putative [Arabidopsis thal...   123   1e-26
ref|XP_003543608.1| PREDICTED: charged multivesicular body prote...   123   2e-26
ref|NP_173215.1| vacuolar protein sorting 46.1 [Arabidopsis thal...   122   3e-26

>ref|XP_004141672.1| PREDICTED: charged multivesicular body protein 1-like [Cucumis
           sativus] gi|449480603|ref|XP_004155942.1| PREDICTED:
           charged multivesicular body protein 1-like [Cucumis
           sativus]
          Length = 203

 Score =  125 bits (315), Expect = 3e-27
 Identities = 62/69 (89%), Positives = 66/69 (95%)
 Frame = +3

Query: 3   MESSMAGSTSLSTPEGEVNSLMQQVADDYGLEVSVGLPQPANHVVPVKSSEKVDEDDLTR 182
           ME++MAGSTSLSTPEGEVNSLMQQVADDYGLEVSVGLPQPA+H VP K +EKVDEDDLTR
Sbjct: 135 MENAMAGSTSLSTPEGEVNSLMQQVADDYGLEVSVGLPQPASHAVPTKETEKVDEDDLTR 194

Query: 183 RLAELKARG 209
           RLAELKARG
Sbjct: 195 RLAELKARG 203


>ref|NP_565053.1| SNF7-like protein [Arabidopsis thaliana]
           gi|297839171|ref|XP_002887467.1| SNF7 family protein
           [Arabidopsis lyrata subsp. lyrata]
           gi|5903092|gb|AAD55650.1|AC008017_23 Highly similar to
           developmental protein DG1118 [Arabidopsis thaliana]
           gi|16648963|gb|AAL24333.1| Highly similar to
           developmental protein DG1118 [Arabidopsis thaliana]
           gi|20148689|gb|AAM10235.1| similar to developmental
           protein DG1118 [Arabidopsis thaliana]
           gi|297333308|gb|EFH63726.1| SNF7 family protein
           [Arabidopsis lyrata subsp. lyrata]
           gi|332197285|gb|AEE35406.1| SNF7-like protein
           [Arabidopsis thaliana]
          Length = 203

 Score =  123 bits (309), Expect = 1e-26
 Identities = 60/69 (86%), Positives = 65/69 (94%)
 Frame = +3

Query: 3   MESSMAGSTSLSTPEGEVNSLMQQVADDYGLEVSVGLPQPANHVVPVKSSEKVDEDDLTR 182
           ME++MAGSTSLSTPEGEVNSLMQQVADDYGLEVSVGLPQPA H +P K+ EKVDEDDL+R
Sbjct: 135 MENAMAGSTSLSTPEGEVNSLMQQVADDYGLEVSVGLPQPAGHAIPTKTEEKVDEDDLSR 194

Query: 183 RLAELKARG 209
           RLAELKARG
Sbjct: 195 RLAELKARG 203


>gb|AAM61431.1| developmental protein, putative [Arabidopsis thaliana]
          Length = 203

 Score =  123 bits (309), Expect = 1e-26
 Identities = 60/69 (86%), Positives = 65/69 (94%)
 Frame = +3

Query: 3   MESSMAGSTSLSTPEGEVNSLMQQVADDYGLEVSVGLPQPANHVVPVKSSEKVDEDDLTR 182
           ME++MAGSTSLSTPEGEVNSLMQQVADDYGLEVSVGLPQPA H +P K+ EKVDEDDL+R
Sbjct: 135 MENAMAGSTSLSTPEGEVNSLMQQVADDYGLEVSVGLPQPAGHAIPTKTEEKVDEDDLSR 194

Query: 183 RLAELKARG 209
           RLAELKARG
Sbjct: 195 RLAELKARG 203


>ref|XP_003543608.1| PREDICTED: charged multivesicular body protein 1-like isoform 1
           [Glycine max] gi|356550468|ref|XP_003543609.1|
           PREDICTED: charged multivesicular body protein 1-like
           isoform 2 [Glycine max] gi|356550470|ref|XP_003543610.1|
           PREDICTED: charged multivesicular body protein 1-like
           isoform 3 [Glycine max] gi|356556672|ref|XP_003546647.1|
           PREDICTED: charged multivesicular body protein 1-like
           [Glycine max]
          Length = 203

 Score =  123 bits (308), Expect = 2e-26
 Identities = 61/69 (88%), Positives = 65/69 (94%)
 Frame = +3

Query: 3   MESSMAGSTSLSTPEGEVNSLMQQVADDYGLEVSVGLPQPANHVVPVKSSEKVDEDDLTR 182
           MES+MAGSTSLSTPEGEVNSLMQQVADDYGLEVSVGLPQPA H VP K ++KVDEDDL+R
Sbjct: 135 MESAMAGSTSLSTPEGEVNSLMQQVADDYGLEVSVGLPQPAAHAVPAKEADKVDEDDLSR 194

Query: 183 RLAELKARG 209
           RLAELKARG
Sbjct: 195 RLAELKARG 203


>ref|NP_173215.1| vacuolar protein sorting 46.1 [Arabidopsis thaliana]
           gi|21553734|gb|AAM62827.1| developmental protein,
           putative [Arabidopsis thaliana]
           gi|26451738|dbj|BAC42964.1| unknown protein [Arabidopsis
           thaliana] gi|332191507|gb|AEE29628.1| vacuolar protein
           sorting 46.1 [Arabidopsis thaliana]
          Length = 203

 Score =  122 bits (306), Expect = 3e-26
 Identities = 59/69 (85%), Positives = 65/69 (94%)
 Frame = +3

Query: 3   MESSMAGSTSLSTPEGEVNSLMQQVADDYGLEVSVGLPQPANHVVPVKSSEKVDEDDLTR 182
           M+++MAGSTSLSTPEGEVNSLMQQVADDYGLEVSVGLPQPA H +P K+ EKV+EDDLTR
Sbjct: 135 MDNAMAGSTSLSTPEGEVNSLMQQVADDYGLEVSVGLPQPAGHAIPTKTEEKVEEDDLTR 194

Query: 183 RLAELKARG 209
           RLAELKARG
Sbjct: 195 RLAELKARG 203


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