BLASTX nr result

ID: Cnidium21_contig00011260 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00011260
         (280 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI20791.3| unnamed protein product [Vitis vinifera]               96   2e-18
ref|XP_002283043.1| PREDICTED: uncharacterized protein LOC100242...    96   2e-18
ref|XP_002527984.1| Ubiquinone biosynthesis protein coq-8, putat...    92   6e-17
ref|XP_002874225.1| ABC1 family protein [Arabidopsis lyrata subs...    91   1e-16
ref|NP_001190388.1| ABC1 family protein [Arabidopsis thaliana] g...    91   1e-16

>emb|CBI20791.3| unnamed protein product [Vitis vinifera]
          Length = 683

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 53/97 (54%), Positives = 63/97 (64%), Gaps = 4/97 (4%)
 Frame = +1

Query: 1   LPDEAMEVTALIFRNSAPSREEDEHXXXXXXXXXXXXXXXXXXXXXTR----RFNPVDAF 168
           LPD+AMEV  + FR+S P+ E  E+                      +    RFNPVDAF
Sbjct: 353 LPDQAMEVATVFFRSSTPASEALENMRSLSKQRTKNMKVIQEKMKLNKKEVKRFNPVDAF 412

Query: 169 PGDIVIFSRVLNLLRGLSSIMKVRINYVDIMRPFAES 279
           PGDIVIF+RVLNLLRGLS+IM VRI+Y+DIMRPFAES
Sbjct: 413 PGDIVIFARVLNLLRGLSTIMDVRISYLDIMRPFAES 449


>ref|XP_002283043.1| PREDICTED: uncharacterized protein LOC100242392 [Vitis vinifera]
          Length = 978

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 53/97 (54%), Positives = 63/97 (64%), Gaps = 4/97 (4%)
 Frame = +1

Query: 1   LPDEAMEVTALIFRNSAPSREEDEHXXXXXXXXXXXXXXXXXXXXXTR----RFNPVDAF 168
           LPD+AMEV  + FR+S P+ E  E+                      +    RFNPVDAF
Sbjct: 353 LPDQAMEVATVFFRSSTPASEALENMRSLSKQRTKNMKVIQEKMKLNKKEVKRFNPVDAF 412

Query: 169 PGDIVIFSRVLNLLRGLSSIMKVRINYVDIMRPFAES 279
           PGDIVIF+RVLNLLRGLS+IM VRI+Y+DIMRPFAES
Sbjct: 413 PGDIVIFARVLNLLRGLSTIMDVRISYLDIMRPFAES 449


>ref|XP_002527984.1| Ubiquinone biosynthesis protein coq-8, putative [Ricinus communis]
           gi|223532610|gb|EEF34396.1| Ubiquinone biosynthesis
           protein coq-8, putative [Ricinus communis]
          Length = 965

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 52/96 (54%), Positives = 60/96 (62%), Gaps = 4/96 (4%)
 Frame = +1

Query: 1   LPDEAMEVTALIFRNSAPSREEDEHXXXXXXXXXXXXXXXXXXXXXT----RRFNPVDAF 168
           LP++AMEVT + FR S P+ E  E+                     +    +RFNPVDAF
Sbjct: 354 LPEQAMEVTNVFFRTSTPANEAFENMKSLAEQRSKNMKVIQEKMKLSQKEVKRFNPVDAF 413

Query: 169 PGDIVIFSRVLNLLRGLSSIMKVRINYVDIMRPFAE 276
           PGDIVIFSRVLNLLRGLSS M VRI Y +IMRPFAE
Sbjct: 414 PGDIVIFSRVLNLLRGLSSTMNVRIIYQEIMRPFAE 449


>ref|XP_002874225.1| ABC1 family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297320062|gb|EFH50484.1| ABC1 family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 1011

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 50/97 (51%), Positives = 59/97 (60%), Gaps = 4/97 (4%)
 Frame = +1

Query: 1   LPDEAMEVTALIFRNSAPSREEDEH----XXXXXXXXXXXXXXXXXXXXXTRRFNPVDAF 168
           +PD+AM V  L FR+S PS E  +                           +RFNP+DAF
Sbjct: 401 MPDQAMSVAGLFFRSSTPSNEAMKTLKTLNDQRVQNMKVIQEKMQLNQKEVKRFNPIDAF 460

Query: 169 PGDIVIFSRVLNLLRGLSSIMKVRINYVDIMRPFAES 279
           PGDIVIF+RV+NLLRGLSS M VRI Y+DIMRPFAES
Sbjct: 461 PGDIVIFARVINLLRGLSSTMNVRIVYLDIMRPFAES 497


>ref|NP_001190388.1| ABC1 family protein [Arabidopsis thaliana]
           gi|332005982|gb|AED93365.1| ABC1 family protein
           [Arabidopsis thaliana]
          Length = 1040

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 50/97 (51%), Positives = 59/97 (60%), Gaps = 4/97 (4%)
 Frame = +1

Query: 1   LPDEAMEVTALIFRNSAPSREEDEH----XXXXXXXXXXXXXXXXXXXXXTRRFNPVDAF 168
           +PD+AM V  L FR+S PS E  +                           +RFNP+DAF
Sbjct: 432 MPDQAMSVAGLFFRSSTPSSEAMKTFKTLNDQRVQNMKVIQEKMQLNQKEVKRFNPIDAF 491

Query: 169 PGDIVIFSRVLNLLRGLSSIMKVRINYVDIMRPFAES 279
           PGDIVIF+RV+NLLRGLSS M VRI Y+DIMRPFAES
Sbjct: 492 PGDIVIFARVINLLRGLSSTMNVRIVYLDIMRPFAES 528


Top