BLASTX nr result

ID: Cnidium21_contig00011259 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00011259
         (483 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003547680.1| PREDICTED: F-box/kelch-repeat protein At3g06...    62   4e-08
gb|ACU18590.1| unknown [Glycine max]                                   62   4e-08
ref|XP_002440131.1| hypothetical protein SORBIDRAFT_09g026600 [S...    62   5e-08
ref|NP_001241466.1| uncharacterized protein LOC100815072 [Glycin...    62   6e-08
ref|XP_003553895.1| PREDICTED: F-box/kelch-repeat protein At3g06...    61   1e-07

>ref|XP_003547680.1| PREDICTED: F-box/kelch-repeat protein At3g06240-like [Glycine max]
          Length = 405

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 26/65 (40%), Positives = 44/65 (67%)
 Frame = -2

Query: 242 LPEAIIHNEILTRLPTKYILRCRLVCKSWYSLFSDPNFVKSHLTRQHSCSEQEEDLIITK 63
           LP  ++ N +L+RLP+K +L C+ VCKSW+ L +DP+FV ++    +S   QEE L++ +
Sbjct: 6   LPGELVSN-VLSRLPSKVLLLCKCVCKSWFDLITDPHFVSNYYVVYNSLQSQEEHLLVIR 64

Query: 62  KPMLT 48
           +P  +
Sbjct: 65  RPFFS 69


>gb|ACU18590.1| unknown [Glycine max]
          Length = 405

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 26/65 (40%), Positives = 44/65 (67%)
 Frame = -2

Query: 242 LPEAIIHNEILTRLPTKYILRCRLVCKSWYSLFSDPNFVKSHLTRQHSCSEQEEDLIITK 63
           LP  ++ N +L+RLP+K +L C+ VCKSW+ L +DP+FV ++    +S   QEE L++ +
Sbjct: 6   LPGELVSN-VLSRLPSKVLLLCKCVCKSWFDLITDPHFVSNYYVVYNSLQSQEEHLLVIR 64

Query: 62  KPMLT 48
           +P  +
Sbjct: 65  RPFFS 69


>ref|XP_002440131.1| hypothetical protein SORBIDRAFT_09g026600 [Sorghum bicolor]
           gi|241945416|gb|EES18561.1| hypothetical protein
           SORBIDRAFT_09g026600 [Sorghum bicolor]
          Length = 429

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 30/69 (43%), Positives = 46/69 (66%)
 Frame = -2

Query: 242 LPEAIIHNEILTRLPTKYILRCRLVCKSWYSLFSDPNFVKSHLTRQHSCSEQEEDLIITK 63
           L E II  EIL RLP K ++R + VCK+W +  SDP F+++HL  +HS ++QE+D  +  
Sbjct: 24  LSEEIIVEEILVRLPVKSLVRFKSVCKAWRATISDPIFIRAHL--RHSATKQEQDPCVII 81

Query: 62  KPMLTDHGI 36
            P++ D+ I
Sbjct: 82  SPLIMDNVI 90


>ref|NP_001241466.1| uncharacterized protein LOC100815072 [Glycine max]
           gi|255637050|gb|ACU18857.1| unknown [Glycine max]
          Length = 406

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 39/101 (38%), Positives = 54/101 (53%), Gaps = 1/101 (0%)
 Frame = -2

Query: 368 HQRGFEEEEKQQI-PKRRTSKIVEEEEKQQIPKKRRTSYKIVVLPEAIIHNEILTRLPTK 192
           H+ GF  + ++ I P  RTS +      +Q P     S  +  LP+ ++  EIL+RLP K
Sbjct: 8   HRIGFTRKRERLINPMDRTSPLPPSSVPKQQPMSE--SLPLPFLPDELVV-EILSRLPVK 64

Query: 191 YILRCRLVCKSWYSLFSDPNFVKSHLTRQHSCSEQEEDLII 69
            +L+ R VCKSW SL SDP F+K HL     C+      II
Sbjct: 65  SLLQFRCVCKSWMSLISDPYFMKKHLHLSSRCTHFTHHRII 105


>ref|XP_003553895.1| PREDICTED: F-box/kelch-repeat protein At3g06240-like [Glycine max]
          Length = 405

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 25/65 (38%), Positives = 42/65 (64%)
 Frame = -2

Query: 242 LPEAIIHNEILTRLPTKYILRCRLVCKSWYSLFSDPNFVKSHLTRQHSCSEQEEDLIITK 63
           LP  ++ N +L+RLP K +L C+ VC SW+ L +DP+FV ++    +S   QEE L++ +
Sbjct: 6   LPRELVSN-VLSRLPAKVLLLCKCVCNSWFDLITDPHFVSNYYVVYNSLQSQEEHLLVIR 64

Query: 62  KPMLT 48
           +P  +
Sbjct: 65  RPFFS 69


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