BLASTX nr result

ID: Cnidium21_contig00011232 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00011232
         (283 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003608947.1| RING-H2 finger protein ATL3I [Medicago trunc...   101   5e-20
ref|XP_003633805.1| PREDICTED: RING-H2 finger protein ATL48-like...   100   2e-19
emb|CBI34952.3| unnamed protein product [Vitis vinifera]              100   2e-19
gb|ADU04138.1| hypothetical protein [Gossypium hirsutum]               98   6e-19
gb|ADU04143.1| hypothetical protein [Gossypium hirsutum]               98   8e-19

>ref|XP_003608947.1| RING-H2 finger protein ATL3I [Medicago truncatula]
           gi|355510002|gb|AES91144.1| RING-H2 finger protein ATL3I
           [Medicago truncatula] gi|388512809|gb|AFK44466.1|
           unknown [Medicago truncatula]
          Length = 82

 Score =  101 bits (252), Expect = 5e-20
 Identities = 52/76 (68%), Positives = 56/76 (73%)
 Frame = +3

Query: 3   MASSDTEFDDLFPEKKRVKNPFVPIXXXXXXXXXXXXXISFRQGNSQLGQKLMRARVVVQ 182
           M S +  F+D   EKKRV+NPFVPI             ISFRQGNSQLGQKLMRARVVVQ
Sbjct: 1   MGSPEPGFEDFLEEKKRVRNPFVPIGALITAGVLTAGLISFRQGNSQLGQKLMRARVVVQ 60

Query: 183 GATVALMVGTAYYYGE 230
           GATVALMVGTAYYYG+
Sbjct: 61  GATVALMVGTAYYYGD 76


>ref|XP_003633805.1| PREDICTED: RING-H2 finger protein ATL48-like [Vitis vinifera]
          Length = 80

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 50/77 (64%), Positives = 57/77 (74%)
 Frame = +3

Query: 3   MASSDTEFDDLFPEKKRVKNPFVPIXXXXXXXXXXXXXISFRQGNSQLGQKLMRARVVVQ 182
           M ++D+E D LF +KKRVKNP VPI             ISF++GNS LGQKLMRARVVVQ
Sbjct: 4   MGTADSEMDQLFEQKKRVKNPLVPIGALLTAGVLTAGLISFKKGNSHLGQKLMRARVVVQ 63

Query: 183 GATVALMVGTAYYYGEK 233
           GATVALM+ TAYYYGEK
Sbjct: 64  GATVALMLSTAYYYGEK 80


>emb|CBI34952.3| unnamed protein product [Vitis vinifera]
          Length = 77

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 50/77 (64%), Positives = 57/77 (74%)
 Frame = +3

Query: 3   MASSDTEFDDLFPEKKRVKNPFVPIXXXXXXXXXXXXXISFRQGNSQLGQKLMRARVVVQ 182
           M ++D+E D LF +KKRVKNP VPI             ISF++GNS LGQKLMRARVVVQ
Sbjct: 1   MGTADSEMDQLFEQKKRVKNPLVPIGALLTAGVLTAGLISFKKGNSHLGQKLMRARVVVQ 60

Query: 183 GATVALMVGTAYYYGEK 233
           GATVALM+ TAYYYGEK
Sbjct: 61  GATVALMLSTAYYYGEK 77


>gb|ADU04138.1| hypothetical protein [Gossypium hirsutum]
          Length = 82

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 49/76 (64%), Positives = 56/76 (73%)
 Frame = +3

Query: 3   MASSDTEFDDLFPEKKRVKNPFVPIXXXXXXXXXXXXXISFRQGNSQLGQKLMRARVVVQ 182
           M+S +  F++L  EKKRV+NP VP+             ISFRQGNSQLGQ LMRARVVVQ
Sbjct: 1   MSSGEPSFEELLEEKKRVRNPLVPVGALITAGVLTAGLISFRQGNSQLGQMLMRARVVVQ 60

Query: 183 GATVALMVGTAYYYGE 230
           GATVALMVGTAYYYG+
Sbjct: 61  GATVALMVGTAYYYGD 76


>gb|ADU04143.1| hypothetical protein [Gossypium hirsutum]
          Length = 82

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 49/76 (64%), Positives = 56/76 (73%)
 Frame = +3

Query: 3   MASSDTEFDDLFPEKKRVKNPFVPIXXXXXXXXXXXXXISFRQGNSQLGQKLMRARVVVQ 182
           M+S +  F++L  EKKRV+NP VP+             ISFRQGNSQLGQ LMRARVVVQ
Sbjct: 1   MSSREPSFEELLEEKKRVRNPLVPVGALITAGVLTAGLISFRQGNSQLGQMLMRARVVVQ 60

Query: 183 GATVALMVGTAYYYGE 230
           GATVALMVGTAYYYG+
Sbjct: 61  GATVALMVGTAYYYGD 76


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