BLASTX nr result

ID: Cnidium21_contig00011166 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00011166
         (357 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274573.1| PREDICTED: translocase of chloroplast 34, ch...   135   5e-30
emb|CAN63847.1| hypothetical protein VITISV_028305 [Vitis vinifera]   134   6e-30
ref|XP_002278775.1| PREDICTED: translocase of chloroplast 34, ch...   126   2e-27
gb|AFW89052.1| hypothetical protein ZEAMMB73_450352 [Zea mays]        120   2e-25
ref|NP_001105522.1| translocon at outer membrane of chloroplast3...   120   2e-25

>ref|XP_002274573.1| PREDICTED: translocase of chloroplast 34, chloroplastic [Vitis
           vinifera] gi|296083376|emb|CBI23265.3| unnamed protein
           product [Vitis vinifera]
          Length = 310

 Score =  135 bits (339), Expect = 5e-30
 Identities = 77/118 (65%), Positives = 82/118 (69%)
 Frame = -2

Query: 356 MASLLIREWTGIQQFPPATQTKLIELLAQLKEKDVSELTILVMGKGGXXXXXXXXXXXXX 177
           MAS LIREWTGIQQFPP TQTKLIELL +LK+++VS LTILVMGKGG             
Sbjct: 1   MASQLIREWTGIQQFPPVTQTKLIELLGKLKQENVSTLTILVMGKGG------------- 47

Query: 176 XXXXLXXXXXXXXXXSTVNSIIGERAVTVSAFQSENPRPVMVSRVRSGFTFNIIDTPG 3
                          STVNSIIGERAV VSAFQSE PRPVMVSR R+GFT NIIDTPG
Sbjct: 48  -----------VGKSSTVNSIIGERAVAVSAFQSEGPRPVMVSRSRAGFTLNIIDTPG 94


>emb|CAN63847.1| hypothetical protein VITISV_028305 [Vitis vinifera]
          Length = 310

 Score =  134 bits (338), Expect = 6e-30
 Identities = 77/118 (65%), Positives = 82/118 (69%)
 Frame = -2

Query: 356 MASLLIREWTGIQQFPPATQTKLIELLAQLKEKDVSELTILVMGKGGXXXXXXXXXXXXX 177
           MAS LIREWTGIQQFPP TQTKLIELL +LK+++VS LTILVMGKGG             
Sbjct: 1   MASQLIREWTGIQQFPPITQTKLIELLGKLKQENVSTLTILVMGKGG------------- 47

Query: 176 XXXXLXXXXXXXXXXSTVNSIIGERAVTVSAFQSENPRPVMVSRVRSGFTFNIIDTPG 3
                          STVNSIIGERAV VSAFQSE PRPVMVSR R+GFT NIIDTPG
Sbjct: 48  -----------VGKSSTVNSIIGERAVAVSAFQSEGPRPVMVSRSRAGFTLNIIDTPG 94


>ref|XP_002278775.1| PREDICTED: translocase of chloroplast 34, chloroplastic [Vitis
           vinifera] gi|297737377|emb|CBI26578.3| unnamed protein
           product [Vitis vinifera]
          Length = 308

 Score =  126 bits (316), Expect = 2e-27
 Identities = 71/118 (60%), Positives = 81/118 (68%)
 Frame = -2

Query: 356 MASLLIREWTGIQQFPPATQTKLIELLAQLKEKDVSELTILVMGKGGXXXXXXXXXXXXX 177
           MA  LIREWTGIQQFP AT+TKLIELL +LK+++V+ LTILVMGKGG             
Sbjct: 1   MAYQLIREWTGIQQFPLATRTKLIELLGKLKQENVNTLTILVMGKGGVGKSS-------- 52

Query: 176 XXXXLXXXXXXXXXXSTVNSIIGERAVTVSAFQSENPRPVMVSRVRSGFTFNIIDTPG 3
                           TVNSI+GERAVTV+AFQSE PRPVMVSR ++GFT NIIDTPG
Sbjct: 53  ----------------TVNSILGERAVTVNAFQSEGPRPVMVSRSQAGFTLNIIDTPG 94


>gb|AFW89052.1| hypothetical protein ZEAMMB73_450352 [Zea mays]
          Length = 196

 Score =  120 bits (300), Expect = 2e-25
 Identities = 69/118 (58%), Positives = 77/118 (65%)
 Frame = -2

Query: 356 MASLLIREWTGIQQFPPATQTKLIELLAQLKEKDVSELTILVMGKGGXXXXXXXXXXXXX 177
           MAS + REW G+QQFPPATQT+L ELL +LKE+DVS LTILVMGKGG             
Sbjct: 1   MASPIPREWVGLQQFPPATQTELHELLGKLKEEDVSTLTILVMGKGG------------- 47

Query: 176 XXXXLXXXXXXXXXXSTVNSIIGERAVTVSAFQSENPRPVMVSRVRSGFTFNIIDTPG 3
                          STVNSI+GER  TVSAFQSE  RP+M SR R+GFT NIIDTPG
Sbjct: 48  -----------VGKSSTVNSIVGERIATVSAFQSEGLRPMMWSRTRAGFTLNIIDTPG 94


>ref|NP_001105522.1| translocon at outer membrane of chloroplast34 [Zea mays]
           gi|6689637|emb|CAB65537.1| Toc34-1 protein [Zea mays]
           gi|194697608|gb|ACF82888.1| unknown [Zea mays]
           gi|195629812|gb|ACG36547.1| translocase of chloroplast
           34 [Zea mays] gi|413956404|gb|AFW89053.1| Toc34-1
           proteinTranslocase of chloroplast 34 [Zea mays]
          Length = 326

 Score =  120 bits (300), Expect = 2e-25
 Identities = 69/118 (58%), Positives = 77/118 (65%)
 Frame = -2

Query: 356 MASLLIREWTGIQQFPPATQTKLIELLAQLKEKDVSELTILVMGKGGXXXXXXXXXXXXX 177
           MAS + REW G+QQFPPATQT+L ELL +LKE+DVS LTILVMGKGG             
Sbjct: 1   MASPIPREWVGLQQFPPATQTELHELLGKLKEEDVSTLTILVMGKGG------------- 47

Query: 176 XXXXLXXXXXXXXXXSTVNSIIGERAVTVSAFQSENPRPVMVSRVRSGFTFNIIDTPG 3
                          STVNSI+GER  TVSAFQSE  RP+M SR R+GFT NIIDTPG
Sbjct: 48  -----------VGKSSTVNSIVGERIATVSAFQSEGLRPMMWSRTRAGFTLNIIDTPG 94


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