BLASTX nr result

ID: Cnidium21_contig00011162 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00011162
         (558 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277244.1| PREDICTED: histidine biosynthesis bifunction...   260   9e-68
ref|XP_002330733.1| predicted protein [Populus trichocarpa] gi|2...   259   2e-67
gb|ABK93460.1| unknown [Populus trichocarpa]                          254   5e-66
ref|NP_174469.1| phosphoribosyl-ATP pyrophosphatase [Arabidopsis...   252   2e-65
ref|XP_002893693.1| AT-IE [Arabidopsis lyrata subsp. lyrata] gi|...   249   2e-64

>ref|XP_002277244.1| PREDICTED: histidine biosynthesis bifunctional protein hisIE,
           chloroplastic [Vitis vinifera]
           gi|296082253|emb|CBI21258.3| unnamed protein product
           [Vitis vinifera]
          Length = 289

 Score =  260 bits (665), Expect = 9e-68
 Identities = 130/180 (72%), Positives = 151/180 (83%), Gaps = 1/180 (0%)
 Frame = +3

Query: 3   SRSKLWTKGETSMNYINICDIFLDCDRDSILYLGKPDGPSCHTGSETCYYTSVFGSLYSS 182
           SRSKLWTKGETS+N+INI DIFLDCDRDSI+YLGKPDGP+CHTGSETCYY+SVF  L + 
Sbjct: 110 SRSKLWTKGETSLNFINIHDIFLDCDRDSIIYLGKPDGPTCHTGSETCYYSSVFDLLKNP 169

Query: 183 QAEDNK-LAMTTLRSLEATIVQRKAEISESSTAKTSWTRRLLLDNNLLCSKIREEADELC 359
           Q E+N  LA+T L SLE+TI QRKAE++     K SWT+RLLLD+ LLCSKIREEADELC
Sbjct: 170 QGEENNNLALTALYSLESTISQRKAEVASPQNGKPSWTKRLLLDDKLLCSKIREEADELC 229

Query: 360 RTLEDSEETPRTASEMADVLYHAMVLLSVRGVTIEEVLTVLRQRFSISGIEEKRSRKLEG 539
           RT E++E+  RTASEMADVLYH MVLLS++ V +EEVL VLR RFS SGIEEK+SR  +G
Sbjct: 230 RTHEENEDKSRTASEMADVLYHTMVLLSLKDVKMEEVLQVLRHRFSQSGIEEKKSRATQG 289


>ref|XP_002330733.1| predicted protein [Populus trichocarpa] gi|222872509|gb|EEF09640.1|
           predicted protein [Populus trichocarpa]
          Length = 286

 Score =  259 bits (662), Expect = 2e-67
 Identities = 128/175 (73%), Positives = 148/175 (84%)
 Frame = +3

Query: 3   SRSKLWTKGETSMNYINICDIFLDCDRDSILYLGKPDGPSCHTGSETCYYTSVFGSLYSS 182
           SRS LWTKGETS N+IN+ DI+LDCDRDSI+YLGKPDGP+CHTGSETCYYTSV   L + 
Sbjct: 111 SRSALWTKGETSKNFINVHDIYLDCDRDSIIYLGKPDGPTCHTGSETCYYTSVPDLLENK 170

Query: 183 QAEDNKLAMTTLRSLEATIVQRKAEISESSTAKTSWTRRLLLDNNLLCSKIREEADELCR 362
           Q + NKLA+TTL SLE  I QRKAE++   T K SWT+RLLLD++LLC+KIREEADELCR
Sbjct: 171 QVDGNKLALTTLYSLETIISQRKAELALPQTGKPSWTKRLLLDHDLLCTKIREEADELCR 230

Query: 363 TLEDSEETPRTASEMADVLYHAMVLLSVRGVTIEEVLTVLRQRFSISGIEEKRSR 527
           TLED+E+  RTA EM DVLYHAMVL++V+GV IEEVL VLR+RF  SGIEEKRSR
Sbjct: 231 TLEDNEDQARTADEMGDVLYHAMVLMAVKGVKIEEVLEVLRKRFFQSGIEEKRSR 285


>gb|ABK93460.1| unknown [Populus trichocarpa]
          Length = 200

 Score =  254 bits (650), Expect = 5e-66
 Identities = 126/175 (72%), Positives = 146/175 (83%)
 Frame = +3

Query: 3   SRSKLWTKGETSMNYINICDIFLDCDRDSILYLGKPDGPSCHTGSETCYYTSVFGSLYSS 182
           SRS LWTKGETS N+IN+ DI+LDCDRDSI+YLGKPDGP+CHTGSETCYYTSV   L + 
Sbjct: 25  SRSALWTKGETSKNFINVHDIYLDCDRDSIIYLGKPDGPTCHTGSETCYYTSVPDLLENK 84

Query: 183 QAEDNKLAMTTLRSLEATIVQRKAEISESSTAKTSWTRRLLLDNNLLCSKIREEADELCR 362
           Q + NKLA+TTL SLE  I +RKAE++     K SWT+RLLLD++LLC KIREEADELCR
Sbjct: 85  QVDGNKLALTTLYSLETIISERKAELALPQIGKPSWTKRLLLDHDLLCLKIREEADELCR 144

Query: 363 TLEDSEETPRTASEMADVLYHAMVLLSVRGVTIEEVLTVLRQRFSISGIEEKRSR 527
           TLED+E+  RTA EM DVLYHAMVL++V+GV IEEVL VLR+RF  SGIEEKRSR
Sbjct: 145 TLEDNEDQARTADEMGDVLYHAMVLMAVKGVKIEEVLEVLRKRFFQSGIEEKRSR 199


>ref|NP_174469.1| phosphoribosyl-ATP pyrophosphatase [Arabidopsis thaliana]
           gi|11132859|sp|O82768.1|HIS2_ARATH RecName:
           Full=Histidine biosynthesis bifunctional protein hisIE,
           chloroplastic; Includes: RecName:
           Full=Phosphoribosyl-AMP cyclohydrolase; Short=PRA-CH;
           Includes: RecName: Full=Phosphoribosyl-ATP
           pyrophosphatase; Short=PRA-PH; Flags: Precursor
           gi|12321304|gb|AAG50725.1|AC079041_18 phosphoribosyl-ATP
           pyrophosphohydrolase (At-IE) [Arabidopsis thaliana]
           gi|3461884|dbj|BAA32528.1| phosphoribosyl-ATP
           pyrophosphohydrolase [Arabidopsis thaliana]
           gi|3461886|dbj|BAA32529.1| phosphoribosyl-ATP
           pyrophosphohydrolase [Arabidopsis thaliana]
           gi|15028395|gb|AAK76674.1| putative phosphoribosyl-ATP
           pyrophosphohydrolase At-IE [Arabidopsis thaliana]
           gi|19310753|gb|AAL85107.1| putative phosphoribosyl-ATP
           pyrophosphohydrolase At-IE [Arabidopsis thaliana]
           gi|21554409|gb|AAM63514.1| phosphoribosyl-ATP
           pyrophosphohydrolase At-IE [Arabidopsis thaliana]
           gi|332193287|gb|AEE31408.1| phosphoribosyl-ATP
           pyrophosphatase [Arabidopsis thaliana]
          Length = 281

 Score =  252 bits (644), Expect = 2e-65
 Identities = 125/175 (71%), Positives = 144/175 (82%)
 Frame = +3

Query: 3   SRSKLWTKGETSMNYINICDIFLDCDRDSILYLGKPDGPSCHTGSETCYYTSVFGSLYSS 182
           SRS LWTKGETS N+INI D+++DCDRDSI+YLG PDGP+CHTG ETCYYTSVF  L + 
Sbjct: 105 SRSTLWTKGETSNNFINILDVYVDCDRDSIIYLGTPDGPTCHTGEETCYYTSVFDQLNND 164

Query: 183 QAEDNKLAMTTLRSLEATIVQRKAEISESSTAKTSWTRRLLLDNNLLCSKIREEADELCR 362
           +A  NKLA+TTL SLE+ I +RK E +     K SWTRRLL D+ LLCSKIREEADELCR
Sbjct: 165 EASGNKLALTTLYSLESIISKRKEESTVPQEGKPSWTRRLLTDDALLCSKIREEADELCR 224

Query: 363 TLEDSEETPRTASEMADVLYHAMVLLSVRGVTIEEVLTVLRQRFSISGIEEKRSR 527
           TLED+EE  RT SEMADVLYHAMVLLS RGV +E+VL VLR+RFS SGIEEK++R
Sbjct: 225 TLEDNEEVSRTPSEMADVLYHAMVLLSKRGVKMEDVLEVLRKRFSQSGIEEKQNR 279


>ref|XP_002893693.1| AT-IE [Arabidopsis lyrata subsp. lyrata]
           gi|297339535|gb|EFH69952.1| AT-IE [Arabidopsis lyrata
           subsp. lyrata]
          Length = 281

 Score =  249 bits (637), Expect = 2e-64
 Identities = 123/175 (70%), Positives = 143/175 (81%)
 Frame = +3

Query: 3   SRSKLWTKGETSMNYINICDIFLDCDRDSILYLGKPDGPSCHTGSETCYYTSVFGSLYSS 182
           SRS LWTKGETS N+INI D+++DCDRDSI+YLG PDGP+CHTG ETCYYTSVF  L + 
Sbjct: 105 SRSTLWTKGETSNNFINILDVYIDCDRDSIIYLGTPDGPTCHTGEETCYYTSVFDQLNND 164

Query: 183 QAEDNKLAMTTLRSLEATIVQRKAEISESSTAKTSWTRRLLLDNNLLCSKIREEADELCR 362
           +   NKLA+TTL SLE+ I +RK E +     K SWTRRLL D+ LLCSKIREEADELCR
Sbjct: 165 EPSGNKLALTTLYSLESIISKRKEESTVPQEGKPSWTRRLLTDDALLCSKIREEADELCR 224

Query: 363 TLEDSEETPRTASEMADVLYHAMVLLSVRGVTIEEVLTVLRQRFSISGIEEKRSR 527
           TLED+EE  RT SEMADVLYHAMVLL+ RGV +E+VL VLR+RFS SGIEEK++R
Sbjct: 225 TLEDNEEVSRTPSEMADVLYHAMVLLAKRGVKMEDVLEVLRKRFSQSGIEEKQNR 279


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