BLASTX nr result

ID: Cnidium21_contig00011153 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00011153
         (1984 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002319844.1| predicted protein [Populus trichocarpa] gi|2...   444   e-122
emb|CBI26627.3| unnamed protein product [Vitis vinifera]              437   e-120
ref|XP_002278373.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   437   e-120
ref|XP_003519572.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   391   e-106
ref|XP_003544936.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   390   e-106

>ref|XP_002319844.1| predicted protein [Populus trichocarpa] gi|222858220|gb|EEE95767.1|
            predicted protein [Populus trichocarpa]
          Length = 766

 Score =  444 bits (1142), Expect = e-122
 Identities = 248/419 (59%), Positives = 286/419 (68%), Gaps = 21/419 (5%)
 Frame = +3

Query: 492  AFKKLRPGIPLKCLHGRMKQERRMGIYSQFCEKRSILFSTDVASRGLDFNKAVDWVVQVD 671
            AFKKLRPGIPLKCLHGRMKQE+RMGIYSQFCE  S+LFSTDVASRGLDFNKAVDWVVQVD
Sbjct: 332  AFKKLRPGIPLKCLHGRMKQEKRMGIYSQFCESHSVLFSTDVASRGLDFNKAVDWVVQVD 391

Query: 672  CPDDVASYIHRVGRTARYLSAGRSVLFLMPTXXXXXXXXXXXXIPVQFIKANTKRLQPVS 851
            CPDDVASYIHRVGRTARYL+ GRSVLFLMP+            IPVQFIKANTKRLQPVS
Sbjct: 392  CPDDVASYIHRVGRTARYLAGGRSVLFLMPSEMKMLEKLQTAKIPVQFIKANTKRLQPVS 451

Query: 852  GLLAALMVKYKDLQPLAQRAFITYLRSIYKQRDKEVFDVTKLPIDEFSASMGLPMTPKIR 1031
            GLL+AL+VKY D+Q LAQRAFITYLRSI+ Q+DKEVFDV KL I+EFSAS+GLPMTPK+R
Sbjct: 452  GLLSALLVKYPDMQQLAQRAFITYLRSIHIQKDKEVFDVLKLSIEEFSASLGLPMTPKVR 511

Query: 1032 FLNQKTKGQK----------EQKEASLPLEVPSGE----NLLELSTXXXXXXXXXXXXXX 1169
            FLNQK KG+K          E  E     E+P  +    N  E S               
Sbjct: 512  FLNQKIKGKKAFGKSALLESEDSEKEDAAEIPGEKLDIGNFREESVGRLKENLKIGDSEE 571

Query: 1170 FLVKK---QSPDIEYGKETTSGNI---LPVTRIGKKKKLKINIHRPAGTRVVFDEEGSTL 1331
              V+K   Q+ +   G E  +G I   +P TR+ KKKKLKIN+HRP GTRVVFDEEG+TL
Sbjct: 572  ENVEKGFLQTKNALNGSEAKTGEIEDLVPATRVLKKKKLKINVHRPVGTRVVFDEEGNTL 631

Query: 1332 PPLATIADMSG-SGSPVMDREKVNKRYAELREEMKVQDKEDKFLDRQRRKEKRIKAKNKL 1508
            PPLA +AD      S ++D++K  + Y  +RE+MK  DKEDK LDRQRR+EKRIK K K 
Sbjct: 632  PPLARVADRKNVDNSSLLDQDKREEYYKNMREQMKHVDKEDKVLDRQRRREKRIKEKMKR 691

Query: 1509 KRGAXXXXXXXXXXXXXXXXRAAGGQKASKRSKIYFDSDNEDSESKGGKGNIGFPADSI 1685
            K G+                   G  +  KRSKIYFDSD++++E    K N G   DSI
Sbjct: 692  KIGSMGLEEDGEGEDDLSGSEGEG--RKHKRSKIYFDSDSDNAEMTESKDNAGISTDSI 748



 Score =  209 bits (532), Expect = 2e-51
 Identities = 104/118 (88%), Positives = 112/118 (94%)
 Frame = +2

Query: 2   RLLQHMDETPNFEGSQLQALVLDEADRILDVGFKKVINAIVSQLPKHRQTFLFSATQTKS 181
           RLLQHMDETPNF+ SQLQ LVLDEADRILDVGFKK +NAIV+QLPKHRQT LFSATQTKS
Sbjct: 200 RLLQHMDETPNFDCSQLQVLVLDEADRILDVGFKKTLNAIVAQLPKHRQTLLFSATQTKS 259

Query: 182 VQDLARLSLKDPEYISVHEESVTATPSRLHQTAMIVPLDQKLDMLWSFVKAHLNSRIL 355
           +QDLARLSLKDPEYISVHE++ TATPSRL QTAMIVPL+QKLDMLWSFVKAHLNS+IL
Sbjct: 260 IQDLARLSLKDPEYISVHEDAETATPSRLQQTAMIVPLEQKLDMLWSFVKAHLNSKIL 317


>emb|CBI26627.3| unnamed protein product [Vitis vinifera]
          Length = 759

 Score =  437 bits (1123), Expect = e-120
 Identities = 240/402 (59%), Positives = 288/402 (71%), Gaps = 4/402 (0%)
 Frame = +3

Query: 492  AFKKLRPGIPLKCLHGRMKQERRMGIYSQFCEKRSILFSTDVASRGLDFNKAVDWVVQVD 671
            AFKKLRPGIPLKCLHG+M Q++RMGIYSQFCE RS+LFSTDVASRGLDFNK VDWV+QVD
Sbjct: 343  AFKKLRPGIPLKCLHGKMNQQKRMGIYSQFCESRSVLFSTDVASRGLDFNKGVDWVIQVD 402

Query: 672  CPDDVASYIHRVGRTARYLSAGRSVLFLMPTXXXXXXXXXXXXIPVQFIKANTKRLQPVS 851
            CP+DVA+YIHRVGRTARY S GRSVLFL+P+            IP+  IKANTKRLQ VS
Sbjct: 403  CPEDVAAYIHRVGRTARYHSEGRSVLFLVPSETEMLKKLEVAKIPIHLIKANTKRLQQVS 462

Query: 852  GLLAALMVKYKDLQPLAQRAFITYLRSIYKQRDKEVFDVTKLPIDEFSASMGLPMTPKIR 1031
             LL  L+VKY D++ LAQ+AFITYLRSI+KQ DKEVFDV +LP++EFS S+GLPMTPK+R
Sbjct: 463  RLLQDLLVKYDDMRYLAQKAFITYLRSIHKQGDKEVFDVMRLPVEEFSVSLGLPMTPKVR 522

Query: 1032 FLNQKTKGQKEQKEASLPL-EVPSGENLLEL--STXXXXXXXXXXXXXXFLVKKQSPDIE 1202
            FLNQKTK +    E SL L E+   ENL E+  S               FL+  +SPD  
Sbjct: 523  FLNQKTKSKLMPAETSLHLPEISDEENLSEIPRSKEVTVGSKELEVDKGFLL-TESPDEA 581

Query: 1203 YGKETTSGNILPVTRIGKKKKLKINIHRPAGTRVVFDEEGSTLPPLATIADMSGSGSPVM 1382
             G+ T    +   TR+ KKKKLKIN+HRP G+RVVFDEEG+TLPPLA IAD   SG+ ++
Sbjct: 582  EGQATEIEAVGLGTRVTKKKKLKINVHRPVGSRVVFDEEGNTLPPLAKIADRD-SGNDLL 640

Query: 1383 DREKVNKRYAELREEMKVQDKEDKFLDRQRRKEKRIKAKNKLK-RGAXXXXXXXXXXXXX 1559
              +KV +RYA+LREEMK +DKEDK L RQR K+KR+K K K+K R +             
Sbjct: 641  QLDKVKERYAKLREEMKPRDKEDKLLHRQRLKDKRMKEKMKMKSRRSEEEYEEDEEDLSG 700

Query: 1560 XXXRAAGGQKASKRSKIYFDSDNEDSESKGGKGNIGFPADSI 1685
                AA G+K SKRSKIYFDSDN +SE +G +  + F A+SI
Sbjct: 701  SDAEAAAGRK-SKRSKIYFDSDNGESEGEGNEDKVKFSAESI 741


>ref|XP_002278373.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 32 [Vitis vinifera]
          Length = 750

 Score =  437 bits (1123), Expect = e-120
 Identities = 240/402 (59%), Positives = 288/402 (71%), Gaps = 4/402 (0%)
 Frame = +3

Query: 492  AFKKLRPGIPLKCLHGRMKQERRMGIYSQFCEKRSILFSTDVASRGLDFNKAVDWVVQVD 671
            AFKKLRPGIPLKCLHG+M Q++RMGIYSQFCE RS+LFSTDVASRGLDFNK VDWV+QVD
Sbjct: 334  AFKKLRPGIPLKCLHGKMNQQKRMGIYSQFCESRSVLFSTDVASRGLDFNKGVDWVIQVD 393

Query: 672  CPDDVASYIHRVGRTARYLSAGRSVLFLMPTXXXXXXXXXXXXIPVQFIKANTKRLQPVS 851
            CP+DVA+YIHRVGRTARY S GRSVLFL+P+            IP+  IKANTKRLQ VS
Sbjct: 394  CPEDVAAYIHRVGRTARYHSEGRSVLFLVPSETEMLKKLEVAKIPIHLIKANTKRLQQVS 453

Query: 852  GLLAALMVKYKDLQPLAQRAFITYLRSIYKQRDKEVFDVTKLPIDEFSASMGLPMTPKIR 1031
             LL  L+VKY D++ LAQ+AFITYLRSI+KQ DKEVFDV +LP++EFS S+GLPMTPK+R
Sbjct: 454  RLLQDLLVKYDDMRYLAQKAFITYLRSIHKQGDKEVFDVMRLPVEEFSVSLGLPMTPKVR 513

Query: 1032 FLNQKTKGQKEQKEASLPL-EVPSGENLLEL--STXXXXXXXXXXXXXXFLVKKQSPDIE 1202
            FLNQKTK +    E SL L E+   ENL E+  S               FL+  +SPD  
Sbjct: 514  FLNQKTKSKLMPAETSLHLPEISDEENLSEIPRSKEVTVGSKELEVDKGFLL-TESPDEA 572

Query: 1203 YGKETTSGNILPVTRIGKKKKLKINIHRPAGTRVVFDEEGSTLPPLATIADMSGSGSPVM 1382
             G+ T    +   TR+ KKKKLKIN+HRP G+RVVFDEEG+TLPPLA IAD   SG+ ++
Sbjct: 573  EGQATEIEAVGLGTRVTKKKKLKINVHRPVGSRVVFDEEGNTLPPLAKIADRD-SGNDLL 631

Query: 1383 DREKVNKRYAELREEMKVQDKEDKFLDRQRRKEKRIKAKNKLK-RGAXXXXXXXXXXXXX 1559
              +KV +RYA+LREEMK +DKEDK L RQR K+KR+K K K+K R +             
Sbjct: 632  QLDKVKERYAKLREEMKPRDKEDKLLHRQRLKDKRMKEKMKMKSRRSEEEYEEDEEDLSG 691

Query: 1560 XXXRAAGGQKASKRSKIYFDSDNEDSESKGGKGNIGFPADSI 1685
                AA G+K SKRSKIYFDSDN +SE +G +  + F A+SI
Sbjct: 692  SDAEAAAGRK-SKRSKIYFDSDNGESEGEGNEDKVKFSAESI 732



 Score =  214 bits (544), Expect = 9e-53
 Identities = 106/118 (89%), Positives = 112/118 (94%)
 Frame = +2

Query: 2   RLLQHMDETPNFEGSQLQALVLDEADRILDVGFKKVINAIVSQLPKHRQTFLFSATQTKS 181
           RLLQHMDETPNF+ SQLQ LVLDEADRILDVGFKK +NAI+SQLPKHRQT LFSATQTKS
Sbjct: 202 RLLQHMDETPNFDCSQLQVLVLDEADRILDVGFKKALNAIISQLPKHRQTLLFSATQTKS 261

Query: 182 VQDLARLSLKDPEYISVHEESVTATPSRLHQTAMIVPLDQKLDMLWSFVKAHLNSRIL 355
           VQDLARLSLKDPEY+SVHEES TATP+RL QTAMIVPLDQKLDMLWSF+KAHLNSRIL
Sbjct: 262 VQDLARLSLKDPEYLSVHEESATATPNRLQQTAMIVPLDQKLDMLWSFIKAHLNSRIL 319


>ref|XP_003519572.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 32-like [Glycine max]
          Length = 746

 Score =  391 bits (1005), Expect = e-106
 Identities = 212/393 (53%), Positives = 260/393 (66%), Gaps = 3/393 (0%)
 Frame = +3

Query: 492  AFKKLRPGIPLKCLHGRMKQERRMGIYSQFCEKRSILFSTDVASRGLDFNKAVDWVVQVD 671
            AFKKL PGIPLKCLHGRMKQERRM IYS+FCEKRS+LFSTDVA+RGLDFNKAVDWVVQVD
Sbjct: 331  AFKKLHPGIPLKCLHGRMKQERRMAIYSEFCEKRSVLFSTDVAARGLDFNKAVDWVVQVD 390

Query: 672  CPDDVASYIHRVGRTARYLSAGRSVLFLMPTXXXXXXXXXXXXIPVQFIKANTKRLQPVS 851
            CP++VASYIHRVGRTARY S G+SVLFL+P+            +PV F K   + LQPVS
Sbjct: 391  CPENVASYIHRVGRTARYKSDGKSVLFLLPSEIQMLEKLKAAKVPVHFNKPRKELLQPVS 450

Query: 852  GLLAALMVKYKDLQPLAQRAFITYLRSIYKQRDKEVFDVTKLPIDEFSASMGLPMTPKIR 1031
             LLA+L+VKY D+Q  AQRAFITYLRSI+ Q+DK++FDV KLPIDE+SAS+GLPMTPKIR
Sbjct: 451  SLLASLLVKYPDMQHRAQRAFITYLRSIHIQKDKDIFDVMKLPIDEYSASLGLPMTPKIR 510

Query: 1032 FLNQKTKGQK-EQKEASLPLEVPSGENLLELSTXXXXXXXXXXXXXXFLVKKQSPDIEYG 1208
            FLNQK K +    K   +  E    E + E+S                 + + +     G
Sbjct: 511  FLNQKIKSKDVSTKSILVEPEDSDKETIFEVSRKKLDTVAFKDEETENDLLQLADTANEG 570

Query: 1209 --KETTSGNILPVTRIGKKKKLKINIHRPAGTRVVFDEEGSTLPPLATIADMSGSGSPVM 1382
              K +    I+P TR+ KKKKLKIN+HRP GTRVVFD+EG TLPPLA IAD       ++
Sbjct: 571  EVKSSEIEEIIPATRVLKKKKLKINVHRPLGTRVVFDDEGHTLPPLARIADTQSGKEMLL 630

Query: 1383 DREKVNKRYAELREEMKVQDKEDKFLDRQRRKEKRIKAKNKLKRGAXXXXXXXXXXXXXX 1562
            D E+  + Y  +R+++K  DKEDK ++RQR +EKRIK K K K G               
Sbjct: 631  DPEQKAEYYRRMRDDLKKADKEDKLIERQRLREKRIKQKMKWKAGNAEEDDQDDISGSEG 690

Query: 1563 XXRAAGGQKASKRSKIYFDSDNEDSESKGGKGN 1661
                    +  K+SK+YFDSD+++ E     GN
Sbjct: 691  DETV---DRLHKKSKVYFDSDSDEGERNEVTGN 720



 Score =  191 bits (486), Expect = 5e-46
 Identities = 94/118 (79%), Positives = 105/118 (88%)
 Frame = +2

Query: 2   RLLQHMDETPNFEGSQLQALVLDEADRILDVGFKKVINAIVSQLPKHRQTFLFSATQTKS 181
           RLLQHMDETPNF+ SQ+Q LVLDEADRILD GFKK +NAI+SQLPK RQT LFSATQTKS
Sbjct: 199 RLLQHMDETPNFDCSQMQVLVLDEADRILDSGFKKELNAIISQLPKRRQTLLFSATQTKS 258

Query: 182 VQDLARLSLKDPEYISVHEESVTATPSRLHQTAMIVPLDQKLDMLWSFVKAHLNSRIL 355
           +QDLARLSLKDPEY+SVHEESVT+TP+ L Q  MIVPL+QKLDMLWSF+K HL S+ L
Sbjct: 259 IQDLARLSLKDPEYLSVHEESVTSTPTLLKQIVMIVPLEQKLDMLWSFIKTHLQSKTL 316


>ref|XP_003544936.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 32-like [Glycine max]
          Length = 743

 Score =  390 bits (1001), Expect = e-106
 Identities = 209/399 (52%), Positives = 259/399 (64%), Gaps = 1/399 (0%)
 Frame = +3

Query: 492  AFKKLRPGIPLKCLHGRMKQERRMGIYSQFCEKRSILFSTDVASRGLDFNKAVDWVVQVD 671
            AFKKL PGIPLKCLHGRMKQERRM IYS+FCEKRS+LFSTDVA+RGLDFNKAVDWVVQVD
Sbjct: 330  AFKKLHPGIPLKCLHGRMKQERRMAIYSEFCEKRSVLFSTDVAARGLDFNKAVDWVVQVD 389

Query: 672  CPDDVASYIHRVGRTARYLSAGRSVLFLMPTXXXXXXXXXXXXIPVQFIKANTKRLQPVS 851
            CP++VASYIHRVGRTARY S G+SVLFL+P+            +PV F K   + LQPVS
Sbjct: 390  CPENVASYIHRVGRTARYKSDGKSVLFLLPSEIQMLEKLKAAKVPVHFNKPRQELLQPVS 449

Query: 852  GLLAALMVKYKDLQPLAQRAFITYLRSIYKQRDKEVFDVTKLPIDEFSASMGLPMTPKIR 1031
             LLA+L+ KY D+Q  AQRAFITYLRSI+ Q+DK++FDV KLPI+E+SAS+GLPMTPKIR
Sbjct: 450  SLLASLLAKYPDMQHRAQRAFITYLRSIHIQKDKDIFDVMKLPINEYSASLGLPMTPKIR 509

Query: 1032 FLNQKTKGQKEQKEASLPLEVPSGENLLELSTXXXXXXXXXXXXXXFLVKKQSPDIE-YG 1208
            FLN K   +   K   +  E    E + E+S                +++      E   
Sbjct: 510  FLNPKINSKDVSKSILVEPEDSDKETIFEVSRKLDTAAFKDEETENDILQLADTANEGEV 569

Query: 1209 KETTSGNILPVTRIGKKKKLKINIHRPAGTRVVFDEEGSTLPPLATIADMSGSGSPVMDR 1388
            K +    I+P TR+ KKKKLKIN+HRP GTRVVFD+EG TLPPLA IAD       ++D 
Sbjct: 570  KSSEIEEIIPATRVLKKKKLKINVHRPLGTRVVFDDEGHTLPPLARIADTQSGKEMLLDP 629

Query: 1389 EKVNKRYAELREEMKVQDKEDKFLDRQRRKEKRIKAKNKLKRGAXXXXXXXXXXXXXXXX 1568
            EK  + Y  +R+++K  D EDK ++RQR +EKRIK K K K G                 
Sbjct: 630  EKKAEYYRRMRDDLKKADNEDKLIERQRLREKRIKQKMKWKAGNAEEDDQDDISGSEVDE 689

Query: 1569 RAAGGQKASKRSKIYFDSDNEDSESKGGKGNIGFPADSI 1685
                  +  K+SK+YFDSD+++ E     GN G    ++
Sbjct: 690  TV---DRWHKKSKVYFDSDSDEGERNDVTGNAGITTGAV 725



 Score =  191 bits (486), Expect = 5e-46
 Identities = 94/118 (79%), Positives = 105/118 (88%)
 Frame = +2

Query: 2   RLLQHMDETPNFEGSQLQALVLDEADRILDVGFKKVINAIVSQLPKHRQTFLFSATQTKS 181
           RLLQHMDETPNF+ SQ+Q LVLDEADRILD GFKK +NAI+SQLPK RQT LFSATQTKS
Sbjct: 198 RLLQHMDETPNFDCSQMQVLVLDEADRILDSGFKKELNAIISQLPKRRQTLLFSATQTKS 257

Query: 182 VQDLARLSLKDPEYISVHEESVTATPSRLHQTAMIVPLDQKLDMLWSFVKAHLNSRIL 355
           +QDLARLSLKDPEY+SVHEESVT+TP+ L Q  MIVPL+QKLDMLWSF+K HL S+ L
Sbjct: 258 IQDLARLSLKDPEYLSVHEESVTSTPTLLKQIVMIVPLEQKLDMLWSFIKTHLQSKTL 315