BLASTX nr result

ID: Cnidium21_contig00011119 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00011119
         (255 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK45592.1| unknown [Medicago truncatula]                          102   4e-20
ref|NP_001242333.1| uncharacterized protein LOC100795506 [Glycin...    99   4e-19
ref|XP_004145780.1| PREDICTED: histone deacetylase HDT1-like [Cu...    97   1e-18
ref|NP_001235884.1| histone deacetylase HDT1 [Glycine max] gi|73...    96   4e-18
ref|XP_002270966.2| PREDICTED: histone deacetylase HDT1-like [Vi...    95   5e-18

>gb|AFK45592.1| unknown [Medicago truncatula]
          Length = 302

 Score =  102 bits (253), Expect = 4e-20
 Identities = 51/79 (64%), Positives = 56/79 (70%), Gaps = 2/79 (2%)
 Frame = +1

Query: 1   SEIKTPASTKKSKTETPQKTDGKKGAHTATPHPAK--KSVKKTAETPKSSAQLSCNSCSK 174
           S  KTP S+KKSK  TP+KTDGKK  HTATPHP K  K+    A+TPKS   LSC+SCSK
Sbjct: 224 SASKTPISSKKSKNATPEKTDGKKAGHTATPHPKKGGKTPNSDAKTPKSGGGLSCSSCSK 283

Query: 175 ICNSEKGLESHSKAKHGGK 231
             NSE GL  HSKAKHG K
Sbjct: 284 TFNSETGLTQHSKAKHGAK 302


>ref|NP_001242333.1| uncharacterized protein LOC100795506 [Glycine max]
           gi|255644846|gb|ACU22923.1| unknown [Glycine max]
          Length = 307

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 51/88 (57%), Positives = 61/88 (69%), Gaps = 11/88 (12%)
 Frame = +1

Query: 1   SEIKTPASTKKSKTETPQKTDGKKGAHTATPHPAKK-----SVKKTAETPKSSAQ----- 150
           S  KTP S+KK+K  TP+KTDGKKG HTATPHPAKK     S +  A+TP + A+     
Sbjct: 220 SASKTPVSSKKAKNATPEKTDGKKGGHTATPHPAKKGGKTPSSEAKAKTPNNEAKTPMSG 279

Query: 151 -LSCNSCSKICNSEKGLESHSKAKHGGK 231
            LSC SCSK  NSE GL+ H+KAKHGG+
Sbjct: 280 GLSCKSCSKSFNSESGLQQHNKAKHGGQ 307


>ref|XP_004145780.1| PREDICTED: histone deacetylase HDT1-like [Cucumis sativus]
          Length = 293

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 47/76 (61%), Positives = 53/76 (69%), Gaps = 3/76 (3%)
 Frame = +1

Query: 13  TPASTKKSKTETPQKTDGKKGAHTATPHPAKKSVKKTA---ETPKSSAQLSCNSCSKICN 183
           TP   KK+K  TP+KTD KKG HTATPHPAKK+ K  A   ETPKS  Q SC SC +   
Sbjct: 218 TPVPAKKAKLATPEKTDSKKGGHTATPHPAKKTGKTPAAKLETPKSGGQFSCKSCDRSFG 277

Query: 184 SEKGLESHSKAKHGGK 231
           S+  L+SHSKAKHGGK
Sbjct: 278 SDVALQSHSKAKHGGK 293


>ref|NP_001235884.1| histone deacetylase HDT1 [Glycine max]
           gi|73919939|sp|Q8LJS2.1|HDT1_SOYBN RecName: Full=Histone
           deacetylase HDT1; AltName: Full=Histone deacetylase 2a;
           Short=HD2a; AltName: Full=Nucleolar histone deacetylase
           HD2-p39 gi|22597156|gb|AAN03465.1| nucleolar histone
           deacetylase HD2-P39 [Glycine max]
          Length = 295

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 46/81 (56%), Positives = 54/81 (66%), Gaps = 4/81 (4%)
 Frame = +1

Query: 1   SEIKTPASTKKSKTETPQKTDGKKGAHTATPHPAKKSVK----KTAETPKSSAQLSCNSC 168
           S  KTP S KK+KT TP+KTDGKK  H ATPHP+KK  K       +TP S+ QLSC SC
Sbjct: 215 SAAKTPISAKKAKTATPEKTDGKKSVHVATPHPSKKGGKTPNSTKGQTPNSAGQLSCASC 274

Query: 169 SKICNSEKGLESHSKAKHGGK 231
            K   +E GL+ H KAKHGG+
Sbjct: 275 KKSFTNEAGLQQHKKAKHGGQ 295


>ref|XP_002270966.2| PREDICTED: histone deacetylase HDT1-like [Vitis vinifera]
          Length = 300

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 50/83 (60%), Positives = 57/83 (68%), Gaps = 8/83 (9%)
 Frame = +1

Query: 1   SEIKTPASTKKSKTETPQKTDGKKG-AHTATPHPAKKSVKKTA-------ETPKSSAQLS 156
           S  KTP   KK+K  +PQKTDGKKG AHTATPHP KK+ K  A       ++PKS  Q+S
Sbjct: 216 SATKTPVPAKKAKLVSPQKTDGKKGGAHTATPHPNKKAGKTPASGDKGKGQSPKSGGQVS 275

Query: 157 CNSCSKICNSEKGLESHSKAKHG 225
           C SCSK  NSE  L+SHSKAKHG
Sbjct: 276 CKSCSKTFNSENALQSHSKAKHG 298


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