BLASTX nr result

ID: Cnidium21_contig00011089 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00011089
         (1000 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273609.1| PREDICTED: uncharacterized protein LOC100240...    91   3e-16
emb|CBI23273.3| unnamed protein product [Vitis vinifera]               85   3e-14
ref|NP_001240123.1| uncharacterized protein LOC100814427 [Glycin...    81   5e-13
ref|XP_002303456.1| predicted protein [Populus trichocarpa] gi|2...    80   6e-13
ref|NP_568647.1| Ribosomal protein L35 [Arabidopsis thaliana] gi...    77   5e-12

>ref|XP_002273609.1| PREDICTED: uncharacterized protein LOC100240778 [Vitis vinifera]
          Length = 165

 Score = 91.3 bits (225), Expect = 3e-16
 Identities = 62/170 (36%), Positives = 78/170 (45%), Gaps = 1/170 (0%)
 Frame = +2

Query: 86  MQRWCSKLRSXXXXXXXXXXXXXXXXXXYRLLHSFSTSNHFTHKPLFVSSNFNPLFVAPS 265
           MQRWC+KL S                   RLLH     +         +SNF PLF A +
Sbjct: 1   MQRWCAKLGSLATSWQNQPFMAPQWR---RLLHHSPQFHRSLPSASITTSNFVPLFNAAA 57

Query: 266 RTSLSL-FSYASPCNVSLIQVRHWXXXXXXXXXXXXXPATPIXXXXXXXXXXXXXXXXGR 442
            +S++  F  +S   + ++ VRH+             P TP+                 R
Sbjct: 58  SSSMAAHFFRSSLLPLYVVPVRHFSSKDKNKRR----PITPVTSKIKKIKMKSYSSFKMR 113

Query: 443 FRVMHDGLIRRWKEGKRHNAHXXXXXXXXXXXQPGIVPAAYATVMKKLNF 592
           FRVM+DG IRRW+EGKRHNAH           QP +VPAAYA VMKKLNF
Sbjct: 114 FRVMNDGNIRRWREGKRHNAHLKSKKAKRRLRQPALVPAAYAKVMKKLNF 163


>emb|CBI23273.3| unnamed protein product [Vitis vinifera]
          Length = 145

 Score = 84.7 bits (208), Expect = 3e-14
 Identities = 54/141 (38%), Positives = 69/141 (48%), Gaps = 1/141 (0%)
 Frame = +2

Query: 173 RLLHSFSTSNHFTHKPLFVSSNFNPLFVAPSRTSLSL-FSYASPCNVSLIQVRHWXXXXX 349
           RLLH     +         +SNF PLF A + +S++  F  +S   + ++ VRH+     
Sbjct: 7   RLLHHSPQFHRSLPSASITTSNFVPLFNAAASSSMAAHFFRSSLLPLYVVPVRHFSSKDK 66

Query: 350 XXXXXXXXPATPIXXXXXXXXXXXXXXXXGRFRVMHDGLIRRWKEGKRHNAHXXXXXXXX 529
                   P TP+                 RFRVM+DG IRRW+EGKRHNAH        
Sbjct: 67  NKRR----PITPVTSKIKKIKMKSYSSFKMRFRVMNDGNIRRWREGKRHNAHLKSKKAKR 122

Query: 530 XXXQPGIVPAAYATVMKKLNF 592
              QP +VPAAYA VMKKLNF
Sbjct: 123 RLRQPALVPAAYAKVMKKLNF 143


>ref|NP_001240123.1| uncharacterized protein LOC100814427 [Glycine max]
           gi|255647090|gb|ACU24013.1| unknown [Glycine max]
          Length = 156

 Score = 80.9 bits (198), Expect = 5e-13
 Identities = 53/126 (42%), Positives = 60/126 (47%)
 Frame = +2

Query: 215 KPLFVSSNFNPLFVAPSRTSLSLFSYASPCNVSLIQVRHWXXXXXXXXXXXXXPATPIXX 394
           +PL  +SNF      PS  S S   +AS  + SL+QVRH              P  P   
Sbjct: 36  QPLHSASNFR--ISRPSFISSSWPLHASHPSPSLVQVRH-----ASSKERKRKPVPPTVS 88

Query: 395 XXXXXXXXXXXXXXGRFRVMHDGLIRRWKEGKRHNAHXXXXXXXXXXXQPGIVPAAYATV 574
                          RFR M+DG IRRWKEGKRHNAH           +PGIVP AYA V
Sbjct: 89  KVKKTKMKSYSSFKSRFRTMNDGNIRRWKEGKRHNAHLKSKKSKRRLRKPGIVPVAYAKV 148

Query: 575 MKKLNF 592
           MKKLNF
Sbjct: 149 MKKLNF 154


>ref|XP_002303456.1| predicted protein [Populus trichocarpa] gi|222840888|gb|EEE78435.1|
           predicted protein [Populus trichocarpa]
          Length = 167

 Score = 80.5 bits (197), Expect = 6e-13
 Identities = 58/169 (34%), Positives = 72/169 (42%)
 Frame = +2

Query: 86  MQRWCSKLRSXXXXXXXXXXXXXXXXXXYRLLHSFSTSNHFTHKPLFVSSNFNPLFVAPS 265
           MQR C+KLRS                  +R LH  + S  +      ++++ +     PS
Sbjct: 1   MQRLCTKLRSLASVSSSHRLLHPPPQSYHRHLHFAAASRKWNLNGSLLNTSSSLPIQLPS 60

Query: 266 RTSLSLFSYASPCNVSLIQVRHWXXXXXXXXXXXXXPATPIXXXXXXXXXXXXXXXXGRF 445
             ++S  S  S    SL+QVRH              P TP                  RF
Sbjct: 61  VAAMSS-SRLSQLPHSLVQVRH---VSSRERKKRRKPMTPRTSKVKKIKMKAYSSYKERF 116

Query: 446 RVMHDGLIRRWKEGKRHNAHXXXXXXXXXXXQPGIVPAAYATVMKKLNF 592
           R M+DG IRRW+EGK HNAH           QP  VPAAYA VMKKLNF
Sbjct: 117 RTMNDGTIRRWREGKNHNAHSKSKKSKRRLRQPSTVPAAYAKVMKKLNF 165


>ref|NP_568647.1| Ribosomal protein L35 [Arabidopsis thaliana]
           gi|21593524|gb|AAM65491.1| unknown [Arabidopsis
           thaliana] gi|26450411|dbj|BAC42320.1| unknown protein
           [Arabidopsis thaliana] gi|28827502|gb|AAO50595.1|
           unknown protein [Arabidopsis thaliana]
           gi|332007889|gb|AED95272.1| Ribosomal protein L35
           [Arabidopsis thaliana]
          Length = 173

 Score = 77.4 bits (189), Expect = 5e-12
 Identities = 61/173 (35%), Positives = 75/173 (43%), Gaps = 4/173 (2%)
 Frame = +2

Query: 86  MQRWCSKLRSXXXXXXXXXXXXXXXXXXYRLLH-SFSTSNHFTHKPLFVSSNFNPLFVAP 262
           MQR+C+KLRS                  +RL+H S S S H T   L  +++    FV  
Sbjct: 1   MQRFCTKLRSISLQSNRNLSFYGASP--HRLIHHSPSPSRHLTTTTLGFANSTKWSFVPA 58

Query: 263 SRTSLSLFSYASPCNVS--LIQVRH-WXXXXXXXXXXXXXPATPIXXXXXXXXXXXXXXX 433
           +    S  S      V    +QVR+               P TPI               
Sbjct: 59  AGVFPSNVSSMGTTFVPHHFVQVRNITSKEKMAKWKKKWRPRTPITSKVKKVKIKFYSSF 118

Query: 434 XGRFRVMHDGLIRRWKEGKRHNAHXXXXXXXXXXXQPGIVPAAYATVMKKLNF 592
             RF+ ++DG IRRWKEGKRHNAH           QPG+VP AYA VMKKLNF
Sbjct: 119 KDRFKPLNDGTIRRWKEGKRHNAHLKSKKSKRRLRQPGLVPPAYAKVMKKLNF 171


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