BLASTX nr result

ID: Cnidium21_contig00011086 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00011086
         (785 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001189969.1| nuclear transport factor 2 and RNA recogniti...    50   2e-08
ref|NP_189151.2| nuclear transport factor 2 and RNA recognition ...    50   2e-08
ref|XP_002863091.1| nuclear transport factor 2 family protein [A...    50   2e-08
ref|XP_003551349.1| PREDICTED: putative G3BP-like protein-like [...    48   3e-08
ref|XP_003532266.1| PREDICTED: putative G3BP-like protein-like [...    48   3e-08

>ref|NP_001189969.1| nuclear transport factor 2 and RNA recognition motif
           domain-containing protein [Arabidopsis thaliana]
           gi|332643464|gb|AEE76985.1| nuclear transport factor 2
           and RNA recognition motif domain-containing protein
           [Arabidopsis thaliana]
          Length = 587

 Score = 50.1 bits (118), Expect(2) = 2e-08
 Identities = 22/27 (81%), Positives = 23/27 (85%)
 Frame = +2

Query: 644 TPRIVGNAFVQQYYHILHQSPALVHRF 724
           TP +VGNAFV QYYHILHQSP  VHRF
Sbjct: 114 TPDMVGNAFVPQYYHILHQSPEHVHRF 140



 Score = 34.7 bits (78), Expect(2) = 2e-08
 Identities = 14/21 (66%), Positives = 19/21 (90%)
 Frame = +1

Query: 721 FYKDTSKLGRPEDDGTMSITT 783
           FY++ SKLGRPE++G MSIT+
Sbjct: 140 FYQEISKLGRPEENGLMSITS 160


>ref|NP_189151.2| nuclear transport factor 2 and RNA recognition motif
           domain-containing protein [Arabidopsis thaliana]
           gi|17979475|gb|AAL50074.1| AT3g25150/MJL12_9
           [Arabidopsis thaliana] gi|21360395|gb|AAM47313.1|
           AT3g25150/MJL12_9 [Arabidopsis thaliana]
           gi|332643463|gb|AEE76984.1| nuclear transport factor 2
           and RNA recognition motif domain-containing protein
           [Arabidopsis thaliana]
          Length = 488

 Score = 50.1 bits (118), Expect(2) = 2e-08
 Identities = 22/27 (81%), Positives = 23/27 (85%)
 Frame = +2

Query: 644 TPRIVGNAFVQQYYHILHQSPALVHRF 724
           TP +VGNAFV QYYHILHQSP  VHRF
Sbjct: 15  TPDMVGNAFVPQYYHILHQSPEHVHRF 41



 Score = 34.7 bits (78), Expect(2) = 2e-08
 Identities = 14/21 (66%), Positives = 19/21 (90%)
 Frame = +1

Query: 721 FYKDTSKLGRPEDDGTMSITT 783
           FY++ SKLGRPE++G MSIT+
Sbjct: 41  FYQEISKLGRPEENGLMSITS 61


>ref|XP_002863091.1| nuclear transport factor 2 family protein [Arabidopsis lyrata
           subsp. lyrata] gi|297308909|gb|EFH39350.1| nuclear
           transport factor 2 family protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 486

 Score = 50.1 bits (118), Expect(2) = 2e-08
 Identities = 22/27 (81%), Positives = 23/27 (85%)
 Frame = +2

Query: 644 TPRIVGNAFVQQYYHILHQSPALVHRF 724
           TP +VGNAFV QYYHILHQSP  VHRF
Sbjct: 15  TPDMVGNAFVPQYYHILHQSPEHVHRF 41



 Score = 34.7 bits (78), Expect(2) = 2e-08
 Identities = 14/21 (66%), Positives = 19/21 (90%)
 Frame = +1

Query: 721 FYKDTSKLGRPEDDGTMSITT 783
           FY++ SKLGRPE++G MSIT+
Sbjct: 41  FYQEISKLGRPEENGLMSITS 61


>ref|XP_003551349.1| PREDICTED: putative G3BP-like protein-like [Glycine max]
          Length = 466

 Score = 48.1 bits (113), Expect(2) = 3e-08
 Identities = 20/24 (83%), Positives = 22/24 (91%)
 Frame = +2

Query: 653 IVGNAFVQQYYHILHQSPALVHRF 724
           IVGNAFV QYYH+LH+SP LVHRF
Sbjct: 17  IVGNAFVDQYYHMLHESPELVHRF 40



 Score = 35.8 bits (81), Expect(2) = 3e-08
 Identities = 15/21 (71%), Positives = 17/21 (80%)
 Frame = +1

Query: 721 FYKDTSKLGRPEDDGTMSITT 783
           FY+D SKLGRPE +G M ITT
Sbjct: 40  FYQDVSKLGRPEQNGIMGITT 60


>ref|XP_003532266.1| PREDICTED: putative G3BP-like protein-like [Glycine max]
          Length = 462

 Score = 48.1 bits (113), Expect(2) = 3e-08
 Identities = 20/24 (83%), Positives = 22/24 (91%)
 Frame = +2

Query: 653 IVGNAFVQQYYHILHQSPALVHRF 724
           IVGNAFV QYYH+LH+SP LVHRF
Sbjct: 17  IVGNAFVDQYYHMLHESPELVHRF 40



 Score = 35.8 bits (81), Expect(2) = 3e-08
 Identities = 15/21 (71%), Positives = 17/21 (80%)
 Frame = +1

Query: 721 FYKDTSKLGRPEDDGTMSITT 783
           FY+D SKLGRPE +G M ITT
Sbjct: 40  FYQDVSKLGRPEQNGIMGITT 60


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