BLASTX nr result
ID: Cnidium21_contig00011070
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cnidium21_contig00011070 (780 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002268095.1| PREDICTED: rRNA-processing protein fcf2-like... 236 4e-60 ref|XP_002312762.1| predicted protein [Populus trichocarpa] gi|1... 230 3e-58 emb|CBI26010.3| unnamed protein product [Vitis vinifera] 230 3e-58 ref|XP_002315466.1| predicted protein [Populus trichocarpa] gi|2... 229 4e-58 ref|XP_004140538.1| PREDICTED: rRNA-processing protein fcf2-like... 226 4e-57 >ref|XP_002268095.1| PREDICTED: rRNA-processing protein fcf2-like isoform 1 [Vitis vinifera] gi|359477274|ref|XP_003631957.1| PREDICTED: rRNA-processing protein fcf2-like isoform 2 [Vitis vinifera] Length = 198 Score = 236 bits (602), Expect = 4e-60 Identities = 120/176 (68%), Positives = 143/176 (81%), Gaps = 4/176 (2%) Frame = -1 Query: 780 KSGSGVKIQSLIEKS--VVYKPNSELVDGLYVPTXXXXXXXXXXXKQIKDTSGKNWFDMP 607 K+GS K +++ E S ++KP+SELVDGL+VP KQ+KDT+G WFDMP Sbjct: 24 KNGSD-KSENVAENSGASLWKPDSELVDGLFVPPNNPRKVNKLLRKQVKDTTGTKWFDMP 82 Query: 606 APTMTPELKKDLQLLKLRTVMDPKRHYKKGDSKS--VPKYFQVGTVIESATEFYTGRLTK 433 APT+TPELKKDLQLLKLR+ +DPKRHYKK DSKS +PKYFQVGTVIESA++F++GRLTK Sbjct: 83 APTITPELKKDLQLLKLRSAIDPKRHYKKSDSKSKTLPKYFQVGTVIESASDFFSGRLTK 142 Query: 432 KERKASLADELLGDHSLGSYRKRKVREIEEKNKPGGVDKWKIKGKESWKRAKQRRH 265 KERKASLADELL + S YRKRKVREIEE+N+P GVDKWKIKG++SWKR KQRRH Sbjct: 143 KERKASLADELLSNSSFADYRKRKVREIEEQNRPAGVDKWKIKGRQSWKRKKQRRH 198 >ref|XP_002312762.1| predicted protein [Populus trichocarpa] gi|118488000|gb|ABK95821.1| unknown [Populus trichocarpa] gi|222852582|gb|EEE90129.1| predicted protein [Populus trichocarpa] Length = 198 Score = 230 bits (586), Expect = 3e-58 Identities = 112/160 (70%), Positives = 133/160 (83%), Gaps = 2/160 (1%) Frame = -1 Query: 738 SVVYKPNSELVDGLYVPTXXXXXXXXXXXKQIKDTSGKNWFDMPAPTMTPELKKDLQLLK 559 S ++KPNS+LVDGL+VP Q KDT GK+WFDMPAPT+T ELK+DLQLLK Sbjct: 39 SALWKPNSQLVDGLFVPPNDPIKLNKLRKSQRKDTLGKDWFDMPAPTITQELKRDLQLLK 98 Query: 558 LRTVMDPKRHYKKGD--SKSVPKYFQVGTVIESATEFYTGRLTKKERKASLADELLGDHS 385 LR+ +DPKRHYK+GD SK +PKYFQVGTV+ESAT+FY+GRLTKKERKA++ADELL D + Sbjct: 99 LRSAIDPKRHYKRGDPKSKDLPKYFQVGTVVESATDFYSGRLTKKERKATIADELLYDQT 158 Query: 384 LGSYRKRKVREIEEKNKPGGVDKWKIKGKESWKRAKQRRH 265 +YRKRKVREIEEKN+PGG DKWKIKGK+S KRAK+RRH Sbjct: 159 FRAYRKRKVREIEEKNRPGGNDKWKIKGKQSRKRAKERRH 198 >emb|CBI26010.3| unnamed protein product [Vitis vinifera] Length = 198 Score = 230 bits (586), Expect = 3e-58 Identities = 117/176 (66%), Positives = 140/176 (79%), Gaps = 4/176 (2%) Frame = -1 Query: 780 KSGSGVKIQSLIEKS--VVYKPNSELVDGLYVPTXXXXXXXXXXXKQIKDTSGKNWFDMP 607 K+GS K +++ E S ++KP+SELVDGL+VP KQ+KDT+G WFDMP Sbjct: 24 KNGSD-KSENVAENSGASLWKPDSELVDGLFVPPNNPRKVNKLLRKQVKDTTGTKWFDMP 82 Query: 606 APTMTPELKKDLQLLKLRTVMDPKRHYKKGDSKS--VPKYFQVGTVIESATEFYTGRLTK 433 APT+TPELKKDLQLLKLR+ +DPKRHYKK DSKS +PKYFQ VIESA++F++GRLTK Sbjct: 83 APTITPELKKDLQLLKLRSAIDPKRHYKKSDSKSKTLPKYFQASLVIESASDFFSGRLTK 142 Query: 432 KERKASLADELLGDHSLGSYRKRKVREIEEKNKPGGVDKWKIKGKESWKRAKQRRH 265 KERKASLADELL + S YRKRKVREIEE+N+P GVDKWKIKG++SWKR KQRRH Sbjct: 143 KERKASLADELLSNSSFADYRKRKVREIEEQNRPAGVDKWKIKGRQSWKRKKQRRH 198 >ref|XP_002315466.1| predicted protein [Populus trichocarpa] gi|222864506|gb|EEF01637.1| predicted protein [Populus trichocarpa] Length = 190 Score = 229 bits (585), Expect = 4e-58 Identities = 111/160 (69%), Positives = 132/160 (82%), Gaps = 2/160 (1%) Frame = -1 Query: 738 SVVYKPNSELVDGLYVPTXXXXXXXXXXXKQIKDTSGKNWFDMPAPTMTPELKKDLQLLK 559 S ++K NS+LVD L+VP Q KDT GK+WFDMPA T+TPELK+DLQLLK Sbjct: 31 SALWKTNSQLVDVLFVPPNDPIKLNKLLKSQRKDTLGKDWFDMPASTITPELKRDLQLLK 90 Query: 558 LRTVMDPKRHYKKGDSKS--VPKYFQVGTVIESATEFYTGRLTKKERKASLADELLGDHS 385 LR+ +DPKRHYK+GDSKS +PKYFQVGTV+ESAT+FY+GRLTKKERK ++ADELL D + Sbjct: 91 LRSAIDPKRHYKRGDSKSKELPKYFQVGTVVESATDFYSGRLTKKERKVTIADELLYDQT 150 Query: 384 LGSYRKRKVREIEEKNKPGGVDKWKIKGKESWKRAKQRRH 265 +YRKRKVREIEEKN+PGG DKWKIKGK+SWKRAK+RRH Sbjct: 151 FSAYRKRKVREIEEKNRPGGNDKWKIKGKQSWKRAKERRH 190 >ref|XP_004140538.1| PREDICTED: rRNA-processing protein fcf2-like [Cucumis sativus] gi|449523942|ref|XP_004168982.1| PREDICTED: rRNA-processing protein fcf2-like [Cucumis sativus] Length = 197 Score = 226 bits (576), Expect = 4e-57 Identities = 115/179 (64%), Positives = 140/179 (78%), Gaps = 8/179 (4%) Frame = -1 Query: 777 SGSGVKIQ------SLIEKSVVYKPNSELVDGLYVPTXXXXXXXXXXXKQIKDTSGKNWF 616 S SG+K + S E +V+K NSELVDGL+VP KQ+ DT+G+NWF Sbjct: 19 SSSGIKAKTCDKSNSQAENGLVWKSNSELVDGLFVPPNNPKKLNKLLRKQVSDTAGRNWF 78 Query: 615 DMPAPTMTPELKKDLQLLKLRTVMDPKRHYKKGDSKS--VPKYFQVGTVIESATEFYTGR 442 DMPA TMTPE++KDL+LLKLR+V+DPKRHYKKGDSKS +PKYFQVGTV+ES+ +F++GR Sbjct: 79 DMPAKTMTPEVEKDLRLLKLRSVIDPKRHYKKGDSKSKTLPKYFQVGTVVESSLDFFSGR 138 Query: 441 LTKKERKASLADELLGDHSLGSYRKRKVREIEEKNKPGGVDKWKIKGKESWKRAKQRRH 265 LTKKERKA+LADELL D +L YRKRKVREIEE+N+PGG DKWKI+G S KRAK RR+ Sbjct: 139 LTKKERKATLADELLSDQALTQYRKRKVREIEEQNRPGGNDKWKIRGHHSRKRAKDRRN 197