BLASTX nr result
ID: Cnidium21_contig00011061
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cnidium21_contig00011061
(1555 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002437006.1| hypothetical protein SORBIDRAFT_10g016776 [S... 97 9e-18
ref|NP_001060485.2| Os07g0651500 [Oryza sativa Japonica Group] g... 94 8e-17
ref|XP_003637946.1| Replication protein A 70 kDa DNA-binding sub... 92 4e-16
emb|CAH66127.1| OSIGBa0135L04.1 [Oryza sativa Indica Group] 91 6e-16
ref|NP_001142593.1| uncharacterized protein LOC100274860 [Zea ma... 91 1e-15
>ref|XP_002437006.1| hypothetical protein SORBIDRAFT_10g016776 [Sorghum bicolor]
gi|241915229|gb|EER88373.1| hypothetical protein
SORBIDRAFT_10g016776 [Sorghum bicolor]
Length = 958
Score = 97.4 bits (241), Expect = 9e-18
Identities = 89/358 (24%), Positives = 148/358 (41%), Gaps = 10/358 (2%)
Frame = -3
Query: 1346 NHIVTTIHNNQKQIYLPLLKEHGVYSVSNFKVVPGPALYRSVDRDFAINFFYKTKIEEKP 1167
N I I+ + + PL+KE VY++S F+V YR VD D INF T EE
Sbjct: 508 NCIHAQIYPPDHEQFKPLIKEGSVYNLSYFRVRKS-GKYRPVDNDHMINFTRWTSAEEVV 566
Query: 1166 D-TCVIPLYKFELQPFDKVKSLVGQIKCLIG*STHTIYTLRISTVIDT*SFSLTDVIGMV 990
+ P+Y + L P +++ + + TDVIG+V
Sbjct: 567 EIPPAFPMYTYSLTPMEQLPPCAEE------------------------TTFFTDVIGVV 602
Query: 989 -----LSYGQLEKRSNGAEKMDVVLINERNEKIVITLWEERAYHFLSSMAEIEQSA-LFV 828
+S ++ R + + K V + N + + LW ERA F + +++ V
Sbjct: 603 TMLSNVSSLRIRTRQSESLKRTVTICNASGASLDVVLWGERATAFPAEQVHRDRTTPQTV 662
Query: 827 VITGLIAKRFSDNASLSSSDATKSYFNIDYKPLHDLKEAAAALSGKNSDSLPPPTSKKFV 648
+ G + K ++DN SLS + K Y N ++ EA A + ++ P +
Sbjct: 663 IFVGALVKSYADNVSLSGGPSCKWYINF------EVPEAKALAASGSNIYQPVKWEQHMA 716
Query: 647 SIDDSSVQELPVKSVLEIKI--PVGKDVVRCLCKGTITEILNGNGWYYNCCTKCAPDVRL 474
S + + K V +IK+ P L T+ +I W+YN C KC R
Sbjct: 717 SSEPVAFAPPEHKKVSDIKLLHPFKYKKTEWLVTVTVQKI--DKSWWYNACKKCLKTARP 774
Query: 473 LEGKYYCNACTEDDIQV-AQRYRVVVRIEDESGSTTLTMFNKEAEQLIGVPLPKVLAE 303
+ C I V RY++ + DE+G T +F + A++L P+ ++A+
Sbjct: 775 FHDSFRCTEPKCGTIGVPVPRYKLCISAGDETGDTEFVIFGRIAQRLTRKPVDTLIAD 832
>ref|NP_001060485.2| Os07g0651500 [Oryza sativa Japonica Group]
gi|255678024|dbj|BAF22399.2| Os07g0651500 [Oryza sativa
Japonica Group]
Length = 2021
Score = 94.4 bits (233), Expect = 8e-17
Identities = 87/331 (26%), Positives = 144/331 (43%), Gaps = 9/331 (2%)
Frame = -3
Query: 1298 PLLKEHGVYSVSNFKVVPGPALYRSVDRDFAINFFYKTKIEEKPDTCV-IPLYKFELQPF 1122
PLLKE VY + +F V YR VD I F T EE + P F L PF
Sbjct: 1689 PLLKEQKVYYIDSFTVRYANRTYRPVDNSLMIVFSKWTTFEEYIEPAADFPGITFSLTPF 1748
Query: 1121 DKVKSLVGQIKCLIG*STHTIYTLRISTVIDT*SFSLTDVIGMVLSYGQ---LEKRSNGA 951
+ +LV + +G +Y ++ DV+G++ G + +S A
Sbjct: 1749 SDIPNLVDKTIFYVG-----LYGMQ------------PDVMGVITEVGSPTVVRPKSRNA 1791
Query: 950 E--KMDVVLINERNEKIVITLWEERAYHF-LSSMAEIEQS-ALFVVITGLIAKRFSD-NA 786
+ K + + + N + +TLW ERA F +S+ Q+ A +V G + K ++
Sbjct: 1792 DSLKRTIQICDASNSTMPVTLWGERADAFDANSVYNAGQTQAQVIVFVGTLVKDYTGLGL 1851
Query: 785 SLSSSDATKSYFNIDYKPLHDLKEAAAALSGKNSDSLPPPTSKKFVSIDDSSVQELPVKS 606
+++ S K Y N+D + +LKE+ +A S P T + ++ ++QE+ +
Sbjct: 1852 TVTGSSPCKWYLNLDIPEVLELKESFSANFRPVSWVDNPATGYNQDTAEEKTIQEILALN 1911
Query: 605 VLEIKIPVGKDVVRCLCKGTITEILNGNGWYYNCCTKCAPDVRLLEGKYYCNACTEDDIQ 426
P R + T+ I + N W+YN C C + Y C++C+ I
Sbjct: 1912 ------PHKNRSTRFIVNVTVRRICSENSWWYNSCRLCYRTSKPYGSSYKCSSCSNIGIP 1965
Query: 425 VAQRYRVVVRIEDESGSTTLTMFNKEAEQLI 333
RY+VV+ D S + T +F + A +LI
Sbjct: 1966 -DPRYKVVLIAGDASSNATFILFGRVAHRLI 1995
>ref|XP_003637946.1| Replication protein A 70 kDa DNA-binding subunit [Medicago
truncatula] gi|358347930|ref|XP_003638003.1| Replication
protein A 70 kDa DNA-binding subunit [Medicago
truncatula] gi|355503881|gb|AES85084.1| Replication
protein A 70 kDa DNA-binding subunit [Medicago
truncatula] gi|355503938|gb|AES85141.1| Replication
protein A 70 kDa DNA-binding subunit [Medicago
truncatula]
Length = 566
Score = 92.0 bits (227), Expect = 4e-16
Identities = 84/367 (22%), Positives = 152/367 (41%), Gaps = 7/367 (1%)
Frame = -3
Query: 1364 LRVCQENHIVTTIHNNQKQIYLPLLKEHGVYSVSNFKVVPGPALYRSVDRDFAINFFYKT 1185
++ + H+V I +N ++E Y + N V Y+ F +N T
Sbjct: 54 IQASAKKHLVPRIRSN--------VEEGSTYDIENVLVTKNDPKYQVTQHRFKLNLIDNT 105
Query: 1184 KIEEKPDTCVIPLYKFELQPFDKVKSLVGQIKCLIG*STHTIYTLRISTVIDT*SFSLTD 1005
K K D IPL F+ PF+++ + K + D
Sbjct: 106 KFF-KIDAATIPLNHFDFMPFNEILEAEREEK-------------------------VVD 139
Query: 1004 VIGMVLSYGQLEKRS-NG--AEKMDVVLINERNEKIVITLWEERAYHFLSSMAEIEQSA- 837
VIG V+ +L++R NG ++ MD+ L + + ++ TLW A S +A + S+
Sbjct: 140 VIGQVVERDELKERDVNGRRSKIMDLTLQDSESRRVHCTLWANYAERMNSFLAAHDPSSP 199
Query: 836 LFVVITGLIAKRFSDNASLSSS-DATKSYFNIDYKPLHDLKEAAAALSGKNSDSLPPPTS 660
+ V+I K++ +S++ TK D + K + S S+ T+
Sbjct: 200 VIVLIQQCKLKKYQGIMGVSNAFFGTKLLLEGDLPEAIEFKSKIDGGDVQVSQSISQNTT 259
Query: 659 KKFVSIDDSSVQ--ELPVKSVLEIKIPVGKDVVRCLCKGTITEILNGNGWYYNCCTKCAP 486
VS+ D +Q + ++ ++E + + + TI I + WYY CTKCA
Sbjct: 260 STVVSLVDDMLQTKRMTIEDLIE-----ATEQCQGIVLATICGIESEYSWYYQACTKCAG 314
Query: 485 DVRLLEGKYYCNACTEDDIQVAQRYRVVVRIEDESGSTTLTMFNKEAEQLIGVPLPKVLA 306
VR + G+ YC C R+++ V++ D +GST+ +F++ + + ++
Sbjct: 315 RVRTVAGRLYCGKCNTGR-NAVPRFKLHVQVMDNTGSTSFILFDRNVSSYVNRTVQDMID 373
Query: 305 EVKENSS 285
NSS
Sbjct: 374 AQPNNSS 380
>emb|CAH66127.1| OSIGBa0135L04.1 [Oryza sativa Indica Group]
Length = 502
Score = 91.3 bits (225), Expect = 6e-16
Identities = 88/331 (26%), Positives = 141/331 (42%), Gaps = 9/331 (2%)
Frame = -3
Query: 1298 PLLKEHGVYSVSNFKVVPGPALYRSVDRDFAINFFYKTKIEEKPDTCV-IPLYKFELQPF 1122
PLLKE VY + +F V YR VD I F T EE + P F L PF
Sbjct: 66 PLLKEQKVYYIDSFTVRYANRTYRPVDNSLMIVFSKWTTFEEYIEPAADFPGITFSLTPF 125
Query: 1121 DKVKSLVGQIKCLIG*STHTIYTLRISTVIDT*SFSLTDVIGMVLSYGQ---LEKRSNGA 951
+ LV + TI+ + DV+G++ G + +S A
Sbjct: 126 SDIPHLVDK----------TIFYV--------------DVMGVITEVGSPTVVRPKSRNA 161
Query: 950 E--KMDVVLINERNEKIVITLWEERAYHF-LSSMAEIEQS-ALFVVITGLIAKRFSD-NA 786
+ K + + + N + ITLW ERA F +S+ Q+ A +V G + K ++
Sbjct: 162 DSLKRTIQICDASNSTMPITLWGERADAFDANSVYNAGQTQAQVIVFVGTLVKDYTGLGL 221
Query: 785 SLSSSDATKSYFNIDYKPLHDLKEAAAALSGKNSDSLPPPTSKKFVSIDDSSVQELPVKS 606
+++ S K Y N+D + +LKE+ +A S P T + ++ ++QE+ +
Sbjct: 222 TVTGSSPCKWYLNLDIPEVLELKESFSANFRPVSWVDNPATGYNQDTAEEKTIQEILALN 281
Query: 605 VLEIKIPVGKDVVRCLCKGTITEILNGNGWYYNCCTKCAPDVRLLEGKYYCNACTEDDIQ 426
P R + T+ I + N W+YN C C + Y C++C+ I
Sbjct: 282 ------PHKNRSTRFIVNVTVRRICSENSWWYNSCRLCYRTSKPYGSSYKCSSCSNIGIP 335
Query: 425 VAQRYRVVVRIEDESGSTTLTMFNKEAEQLI 333
RY+VV+ D S + T +F + A +LI
Sbjct: 336 -DPRYKVVLITGDASSNATFILFGRVAHRLI 365
>ref|NP_001142593.1| uncharacterized protein LOC100274860 [Zea mays]
gi|195607088|gb|ACG25374.1| hypothetical protein [Zea
mays]
Length = 549
Score = 90.5 bits (223), Expect = 1e-15
Identities = 92/369 (24%), Positives = 154/369 (41%), Gaps = 14/369 (3%)
Frame = -3
Query: 1346 NHIVTTIHNNQKQIYLPLLKEHGVYSVSNFKVVPGPALYRSVDRDFAINFFYKTKIEEKP 1167
N I I N P ++E +Y++S F+V ++ VD D I F + T ++
Sbjct: 50 NAIYAEIPANLANQKAPDIEEGRIYNISRFRVCAAKNGFKVVDGDKMIQFTFYTIVKRVI 109
Query: 1166 DT-CVIPLYKFELQPFDKVKSLVGQIKCLIG*STHTIYTLRISTVIDT*SFSLTDVIGMV 990
D V P Y + L PFD+++S + Q K + DV+G++
Sbjct: 110 DPPTVFPKYIYRLTPFDQIESNI-QTKP-----------------------NFLDVLGVI 145
Query: 989 LSYGQL-----EKRSNGAEKMDVVLINERNEKIVITLWEERAYHFLSSMAEI----EQSA 837
+ +L + + N +++ + N + ITLW ++A F S+ ++ +
Sbjct: 146 IQVHELTPIHIQSQLNPVLTRSIIIEDLSNTPLKITLWADQATSF--SLHDVYDPNTKKP 203
Query: 836 LFVVITGLIAKRFSDNASLSSSDATKSYFNI---DYKPLHDLKEAAAALSGKNSDSLPPP 666
+ V+ G + K F LS A + YFN + +P H ++ PP
Sbjct: 204 IIVLFVGCLPK-FYKGVYLSGGSACRWYFNPTIPEAEPYHTSQQTRTIALQLPHALNHPP 262
Query: 665 TSKKFVSIDDSSVQELPVKSVLEIKI-PVGKDVVRCLCKGTITEILNGNGWYYNCCTKCA 489
T + + + S+ +L I+I P + C TITEI N W+Y CTKC
Sbjct: 263 TIENKEAAESKSLYDL-------IRINPYDFPEIGYECTVTITEIPVENKWWYPACTKCF 315
Query: 488 PDVRLLEGKYYCNACTEDDIQVAQRYRVVVRIEDESGSTTLTMFNKEAEQLIGVPLPKVL 309
Y+CN C D + RY++ D + + + FN A Q++G VL
Sbjct: 316 KASTPQNTVYHCNDCNWD--KYTFRYKLKFLASDGTETAEMFCFNNIARQIVGKSREVVL 373
Query: 308 AEVKENSSM 282
V E+SS+
Sbjct: 374 RGVSEHSSI 382