BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00010999
         (479 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15747.3| unnamed protein product [Vitis vinifera]              109   2e-22
ref|XP_002284518.1| PREDICTED: ATP-dependent Clp protease ATP-bi...   108   6e-22
sp|P31541.1|CLPAA_SOLLC RecName: Full=ATP-dependent Clp protease...   107   8e-22
sp|P31542.1|CLPAB_SOLLC RecName: Full=ATP-dependent Clp protease...   106   2e-21
gb|ADN33858.1| ATP-dependent clp protease [Cucumis melo subsp. m...   103   1e-20

>emb|CBI15747.3| unnamed protein product [Vitis vinifera]
          Length = 746

 Score =  109 bits (273), Expect = 2e-22
 Identities = 73/136 (53%), Positives = 83/136 (61%), Gaps = 3/136 (2%)
 Frame = -1

Query: 401 VMAGALVQSTSFPSSVAGERIAQPKSGKTRTSRRT---VKMMCTVHNVPSRVRGFSGLRG 231
           VMA ALVQST+  +SVA       K GK + S RT   VKMMC V     R+RGFSGLRG
Sbjct: 48  VMARALVQSTNIFASVA-----DGKHGKFQGSERTKKSVKMMCNVQAPGLRIRGFSGLRG 102

Query: 230 AXXXXXXXXXXXXXXXXXXXXXLDMIGKSGQSFHSRVAASTSVQRGRASRIAPKAMFERF 51
           A                     LD + +SG  FHSRVAA+ SV+ G+ASR   +AMFERF
Sbjct: 103 ANA-------------------LDNLVRSGHDFHSRVAAAISVRGGKASRCVARAMFERF 143

Query: 50  TEKAIKVIMLAQEEAR 3
           TEKAIKVIMLAQEEAR
Sbjct: 144 TEKAIKVIMLAQEEAR 159


>ref|XP_002284518.1| PREDICTED: ATP-dependent Clp protease ATP-binding subunit clpA
           homolog CD4A, chloroplastic-like [Vitis vinifera]
          Length = 923

 Score =  108 bits (269), Expect = 6e-22
 Identities = 72/135 (53%), Positives = 82/135 (60%), Gaps = 3/135 (2%)
 Frame = -1

Query: 398 MAGALVQSTSFPSSVAGERIAQPKSGKTRTSRRT---VKMMCTVHNVPSRVRGFSGLRGA 228
           MA ALVQST+  +SVA       K GK + S RT   VKMMC V     R+RGFSGLRGA
Sbjct: 1   MARALVQSTNIFASVA-----DGKHGKFQGSERTKKSVKMMCNVQAPGLRIRGFSGLRGA 55

Query: 227 XXXXXXXXXXXXXXXXXXXXXLDMIGKSGQSFHSRVAASTSVQRGRASRIAPKAMFERFT 48
                                LD + +SG  FHSRVAA+ SV+ G+ASR   +AMFERFT
Sbjct: 56  NA-------------------LDNLVRSGHDFHSRVAAAISVRGGKASRCVARAMFERFT 96

Query: 47  EKAIKVIMLAQEEAR 3
           EKAIKVIMLAQEEAR
Sbjct: 97  EKAIKVIMLAQEEAR 111


>sp|P31541.1|CLPAA_SOLLC RecName: Full=ATP-dependent Clp protease ATP-binding subunit clpA
           homolog CD4A, chloroplastic; Flags: Precursor
           gi|170433|gb|AAA34160.1| ATP-dependent protease (CD4A)
           [Solanum lycopersicum]
          Length = 926

 Score =  107 bits (268), Expect = 8e-22
 Identities = 66/133 (49%), Positives = 81/133 (60%)
 Frame = -1

Query: 401 VMAGALVQSTSFPSSVAGERIAQPKSGKTRTSRRTVKMMCTVHNVPSRVRGFSGLRGAXX 222
           +MA ALVQST+   SVAGER  Q     +R  +RTV+M+C V    SR+  F+GLRG   
Sbjct: 1   MMARALVQSTNILPSVAGERAGQFNG--SRKDQRTVRMLCNVKCCSSRLNNFAGLRGCNA 58

Query: 221 XXXXXXXXXXXXXXXXXXXLDMIGKSGQSFHSRVAASTSVQRGRASRIAPKAMFERFTEK 42
                                ++ KSG++ HS+VAA+T V+R R  R  PKAMFERFTEK
Sbjct: 59  LDT------------------LLVKSGETLHSKVAAATFVRRPRGCRFVPKAMFERFTEK 100

Query: 41  AIKVIMLAQEEAR 3
           AIKVIMLAQEEAR
Sbjct: 101 AIKVIMLAQEEAR 113


>sp|P31542.1|CLPAB_SOLLC RecName: Full=ATP-dependent Clp protease ATP-binding subunit clpA
           homolog CD4B, chloroplastic; Flags: Precursor
           gi|170435|gb|AAA34161.1| ATP-dependent protease (CD4B)
           [Solanum lycopersicum]
          Length = 923

 Score =  106 bits (264), Expect = 2e-21
 Identities = 67/133 (50%), Positives = 81/133 (60%), Gaps = 1/133 (0%)
 Frame = -1

Query: 398 MAGALVQSTSFPSSVAGERIAQPK-SGKTRTSRRTVKMMCTVHNVPSRVRGFSGLRGAXX 222
           MA ALVQSTS PSSVAGER  +   SGKT+   R V M+C   +    +R F+GLRG   
Sbjct: 1   MARALVQSTSIPSSVAGERTTKFNGSGKTK---RAVTMLCNAQSSSLTLRDFTGLRGCNA 57

Query: 221 XXXXXXXXXXXXXXXXXXXLDMIGKSGQSFHSRVAASTSVQRGRASRIAPKAMFERFTEK 42
                              +D + +SG++  S+VAA+T V+R R  R  PKAMFERFTEK
Sbjct: 58  -------------------IDTLVRSGETLQSKVAAATYVRRPRGCRFVPKAMFERFTEK 98

Query: 41  AIKVIMLAQEEAR 3
           AIKVIMLAQEEAR
Sbjct: 99  AIKVIMLAQEEAR 111


>gb|ADN33858.1| ATP-dependent clp protease [Cucumis melo subsp. melo]
          Length = 929

 Score =  103 bits (257), Expect = 1e-20
 Identities = 63/132 (47%), Positives = 76/132 (57%)
 Frame = -1

Query: 398 MAGALVQSTSFPSSVAGERIAQPKSGKTRTSRRTVKMMCTVHNVPSRVRGFSGLRGAXXX 219
           MA  LVQST+ P  V G +      G     +R VKMM T H+   R+R FSGLRG    
Sbjct: 1   MARVLVQSTNIPGLVGGRKNGLTSRGSASV-KRAVKMMATAHSPGLRIRNFSGLRG---- 55

Query: 218 XXXXXXXXXXXXXXXXXXLDMIGKSGQSFHSRVAASTSVQRGRASRIAPKAMFERFTEKA 39
                             LD + +SGQ FHS++A + S +R +ASR  P+AMFERFTEKA
Sbjct: 56  ---------------FNSLDNMLRSGQDFHSKMAITISSRRRKASRCVPRAMFERFTEKA 100

Query: 38  IKVIMLAQEEAR 3
           IKVIMLAQEEAR
Sbjct: 101 IKVIMLAQEEAR 112