BLASTX nr result

ID: Cnidium21_contig00010970 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00010970
         (819 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269731.1| PREDICTED: E3 ubiquitin-protein ligase RNF16...   132   7e-29
ref|XP_002325986.1| predicted protein [Populus trichocarpa] gi|2...   117   2e-24
ref|XP_003536389.1| PREDICTED: E3 ubiquitin-protein ligase RNF16...   117   3e-24
ref|XP_003556191.1| PREDICTED: E3 ubiquitin-protein ligase RNF16...   116   7e-24
emb|CBI18269.3| unnamed protein product [Vitis vinifera]              115   2e-23

>ref|XP_002269731.1| PREDICTED: E3 ubiquitin-protein ligase RNF167-like [Vitis vinifera]
          Length = 446

 Score =  132 bits (333), Expect = 7e-29
 Identities = 66/88 (75%), Positives = 76/88 (86%), Gaps = 1/88 (1%)
 Frame = -1

Query: 624 LSASQSSLDLRNASSQRSIAPHLASSNSLGYPSLSPLNARYMSPYIPSPGNAS-TYIGSS 448
           LS S+SSLDLRNASSQRS A +L S +S+GYPSLSPLN+RY+SPYIPSP NAS +Y+GSS
Sbjct: 359 LSVSRSSLDLRNASSQRSHASYLVSPHSMGYPSLSPLNSRYLSPYIPSPSNASLSYVGSS 418

Query: 447 NQQPHPLHLSESAASFSPYASAQSLPGC 364
           ++ PHPLH SESA SFSPY SAQSLP C
Sbjct: 419 SRPPHPLHYSESATSFSPYTSAQSLPEC 446


>ref|XP_002325986.1| predicted protein [Populus trichocarpa] gi|222862861|gb|EEF00368.1|
           predicted protein [Populus trichocarpa]
          Length = 437

 Score =  117 bits (294), Expect = 2e-24
 Identities = 60/87 (68%), Positives = 68/87 (78%)
 Frame = -1

Query: 624 LSASQSSLDLRNASSQRSIAPHLASSNSLGYPSLSPLNARYMSPYIPSPGNASTYIGSSN 445
           ++ SQSS DLRN SS RS A  L S +SLGYPS+SPLN RYMS YIPSP NAS  + SS+
Sbjct: 351 ITLSQSSADLRNMSSLRSRASFLVSPHSLGYPSISPLNTRYMSAYIPSPSNASPSLVSSS 410

Query: 444 QQPHPLHLSESAASFSPYASAQSLPGC 364
           +QP PLH SESAASFSP+ASA SLP C
Sbjct: 411 RQPRPLHCSESAASFSPFASAHSLPDC 437


>ref|XP_003536389.1| PREDICTED: E3 ubiquitin-protein ligase RNF167-like [Glycine max]
          Length = 469

 Score =  117 bits (293), Expect = 3e-24
 Identities = 62/88 (70%), Positives = 72/88 (81%), Gaps = 1/88 (1%)
 Frame = -1

Query: 624 LSASQSSLDLRNASSQRSIAPHLASSNSLGYPSLSPLNARYMSPYIPSPGNAS-TYIGSS 448
           LS S+SS+DLRNAS QRS+A HL S  S+GYPSLS LN+RYMSP+IPSP NAS +Y+GSS
Sbjct: 383 LSISRSSVDLRNAS-QRSLASHLNSPRSMGYPSLSSLNSRYMSPHIPSPSNASVSYMGSS 441

Query: 447 NQQPHPLHLSESAASFSPYASAQSLPGC 364
           + Q HPL  SESAASFSP+AS  SLP C
Sbjct: 442 SHQQHPLRYSESAASFSPFASTHSLPEC 469


>ref|XP_003556191.1| PREDICTED: E3 ubiquitin-protein ligase RNF167-like [Glycine max]
          Length = 495

 Score =  116 bits (290), Expect = 7e-24
 Identities = 62/88 (70%), Positives = 72/88 (81%), Gaps = 1/88 (1%)
 Frame = -1

Query: 624 LSASQSSLDLRNASSQRSIAPHLASSNSLGYPSLSPLNARYMSPYIPSPGNAS-TYIGSS 448
           LS S+SS+DLRNAS QRS+A HL S  S+GYPSLS LN+RYMSP+IPSP NAS +Y+GSS
Sbjct: 409 LSISRSSVDLRNAS-QRSLASHLNSPCSMGYPSLSSLNSRYMSPHIPSPSNASVSYMGSS 467

Query: 447 NQQPHPLHLSESAASFSPYASAQSLPGC 364
           + Q HPL  SESAASFSP+AS  SLP C
Sbjct: 468 SHQQHPLRYSESAASFSPFASTHSLPEC 495


>emb|CBI18269.3| unnamed protein product [Vitis vinifera]
          Length = 424

 Score =  115 bits (287), Expect = 2e-23
 Identities = 56/76 (73%), Positives = 66/76 (86%), Gaps = 1/76 (1%)
 Frame = -1

Query: 594 RNASSQRSIAPHLASSNSLGYPSLSPLNARYMSPYIPSPGNAS-TYIGSSNQQPHPLHLS 418
           +NASSQRS A +L S +S+GYPSLSPLN+RY+SPYIPSP NAS +Y+GSS++ PHPLH S
Sbjct: 333 QNASSQRSHASYLVSPHSMGYPSLSPLNSRYLSPYIPSPSNASLSYVGSSSRPPHPLHYS 392

Query: 417 ESAASFSPYASAQSLP 370
           ESA SFSPY SAQSLP
Sbjct: 393 ESATSFSPYTSAQSLP 408


Top