BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00010958
         (383 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_566058.2| SKP1-like protein 20 [Arabidopsis thaliana] gi|...   122   4e-26
ref|NP_001078065.1| SKP1-like protein 20 [Arabidopsis thaliana] ...   122   4e-26
gb|AAK43870.1|AF370493_1 putative SKP1-like protein [Arabidopsis...   122   4e-26
ref|XP_002511871.1| ubiquitin-protein ligase, putative [Ricinus ...   120   1e-25
ref|XP_002882042.1| hypothetical protein ARALYDRAFT_483735 [Arab...   119   3e-25

>ref|NP_566058.2| SKP1-like protein 20 [Arabidopsis thaliana]
           gi|330255526|gb|AEC10620.1| SKP1-like protein 20
           [Arabidopsis thaliana]
          Length = 342

 Score =  122 bits (305), Expect = 4e-26
 Identities = 58/93 (62%), Positives = 71/93 (76%), Gaps = 1/93 (1%)
 Frame = +2

Query: 104 LSIMPHLTMKSYIWIQTSDGTVQEVEQGIAMLCPYIAHEM-SAGLGSSKTNPISLSSRVK 280
           L++M   TMKSYIW+QT+DG++Q+VEQ +AM CP I  E+   G+GSSK + ISL  RV 
Sbjct: 6   LAVMKPETMKSYIWLQTADGSIQQVEQEVAMFCPMICQEVIQKGVGSSKNHAISLPQRVN 65

Query: 281 PNSLSLIFDYCRFHGLPGRSNKERKTFDENFLR 379
           P   SLI DYCRFH LPGRSNKERKT+DE F+R
Sbjct: 66  PAMFSLILDYCRFHQLPGRSNKERKTYDERFIR 98


>ref|NP_001078065.1| SKP1-like protein 20 [Arabidopsis thaliana]
           gi|238055126|sp|A8MQG7.1|ASK20_ARATH RecName:
           Full=SKP1-like protein 20; Short=AtSK20
           gi|330255527|gb|AEC10621.1| SKP1-like protein 20
           [Arabidopsis thaliana]
          Length = 352

 Score =  122 bits (305), Expect = 4e-26
 Identities = 58/93 (62%), Positives = 71/93 (76%), Gaps = 1/93 (1%)
 Frame = +2

Query: 104 LSIMPHLTMKSYIWIQTSDGTVQEVEQGIAMLCPYIAHEM-SAGLGSSKTNPISLSSRVK 280
           L++M   TMKSYIW+QT+DG++Q+VEQ +AM CP I  E+   G+GSSK + ISL  RV 
Sbjct: 6   LAVMKPETMKSYIWLQTADGSIQQVEQEVAMFCPMICQEVIQKGVGSSKNHAISLPQRVN 65

Query: 281 PNSLSLIFDYCRFHGLPGRSNKERKTFDENFLR 379
           P   SLI DYCRFH LPGRSNKERKT+DE F+R
Sbjct: 66  PAMFSLILDYCRFHQLPGRSNKERKTYDERFIR 98


>gb|AAK43870.1|AF370493_1 putative SKP1-like protein [Arabidopsis thaliana]
           gi|20148737|gb|AAM10259.1| putative SKP1-like protein
           [Arabidopsis thaliana] gi|20197211|gb|AAC28530.2| E3
           ubiquitin ligase SCF complex subunit SKP1/ASK1-related
           [Arabidopsis thaliana]
          Length = 227

 Score =  122 bits (305), Expect = 4e-26
 Identities = 58/93 (62%), Positives = 71/93 (76%), Gaps = 1/93 (1%)
 Frame = +2

Query: 104 LSIMPHLTMKSYIWIQTSDGTVQEVEQGIAMLCPYIAHEM-SAGLGSSKTNPISLSSRVK 280
           L++M   TMKSYIW+QT+DG++Q+VEQ +AM CP I  E+   G+GSSK + ISL  RV 
Sbjct: 6   LAVMKPETMKSYIWLQTADGSIQQVEQEVAMFCPMICQEVIQKGVGSSKNHAISLPQRVN 65

Query: 281 PNSLSLIFDYCRFHGLPGRSNKERKTFDENFLR 379
           P   SLI DYCRFH LPGRSNKERKT+DE F+R
Sbjct: 66  PAMFSLILDYCRFHQLPGRSNKERKTYDERFIR 98


>ref|XP_002511871.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223549051|gb|EEF50540.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 359

 Score =  120 bits (301), Expect = 1e-25
 Identities = 57/85 (67%), Positives = 67/85 (78%), Gaps = 1/85 (1%)
 Frame = +2

Query: 128 MKSYIWIQTSDGTVQEVEQGIAMLCPYIAHEM-SAGLGSSKTNPISLSSRVKPNSLSLIF 304
           MKSYIW+QT+DG++Q+VEQ +AM CP I HE+   GLGSSK   ISL  RV P  LSLI 
Sbjct: 6   MKSYIWLQTADGSIQQVEQEVAMFCPMICHEIIQKGLGSSKNYAISLPQRVNPAMLSLIL 65

Query: 305 DYCRFHGLPGRSNKERKTFDENFLR 379
           DYCRFH +PGRSNKERK+FDE F+R
Sbjct: 66  DYCRFHQVPGRSNKERKSFDEKFIR 90


>ref|XP_002882042.1| hypothetical protein ARALYDRAFT_483735 [Arabidopsis lyrata subsp.
           lyrata] gi|297327881|gb|EFH58301.1| hypothetical protein
           ARALYDRAFT_483735 [Arabidopsis lyrata subsp. lyrata]
          Length = 334

 Score =  119 bits (298), Expect = 3e-25
 Identities = 56/86 (65%), Positives = 67/86 (77%), Gaps = 1/86 (1%)
 Frame = +2

Query: 125 TMKSYIWIQTSDGTVQEVEQGIAMLCPYIAHEM-SAGLGSSKTNPISLSSRVKPNSLSLI 301
           TMKSYIW+QT+DG++Q+VEQ +AM CP I  E+   G+GSSK + ISL  RV P   SLI
Sbjct: 5   TMKSYIWLQTADGSIQQVEQEVAMFCPMICQEVIQKGVGSSKNHAISLPQRVNPAMFSLI 64

Query: 302 FDYCRFHGLPGRSNKERKTFDENFLR 379
            DYCRFH LPGRSNKERKT+DE F+R
Sbjct: 65  LDYCRFHQLPGRSNKERKTYDERFIR 90