BLASTX nr result

ID: Cnidium21_contig00010952 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00010952
         (1835 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK46018.1| unknown [Lotus japonicus]                               67   2e-08
ref|XP_003571204.1| PREDICTED: zinc finger CCCH domain-containin...    65   8e-08
ref|XP_002279071.1| PREDICTED: zinc finger CCCH domain-containin...    64   1e-07
sp|Q69XQ3.1|C3H44_ORYSJ RecName: Full=Zinc finger CCCH domain-co...    63   3e-07
gb|EEE66019.1| hypothetical protein OsJ_21979 [Oryza sativa Japo...    63   3e-07

>gb|AFK46018.1| unknown [Lotus japonicus]
          Length = 296

 Score = 66.6 bits (161), Expect = 2e-08
 Identities = 59/200 (29%), Positives = 84/200 (42%), Gaps = 40/200 (20%)
 Frame = +3

Query: 348 C*LDERCRFSHDAVYGYNASA----------------------VPNFAEE--KTLLCYKF 455
           C   E C F H+   GYNA A                      VPN +    KT +C KF
Sbjct: 49  CPFGESCHFLHNVPGGYNAVAHMMNLAPSAQAPPRNVAAPPPPVPNGSTPAVKTRICNKF 108

Query: 456 SHG-GCVESEKCPYAHGEGELRVPIT-YFKIPDEAGPMPTSSLADCLK----PQTRFG-- 611
           +   GC   +KC +AHGE EL   I   F      G  P   +   ++    P T FG  
Sbjct: 109 NTAEGCKFGDKCHFAHGEWELGKHIAPSFDDHRPIGHAPAGRIGGRMEPPPGPATGFGAN 168

Query: 612 --XXXXXXXXXXXXXXXXNGMDSKLYARMSGTEISFEEDESDHSLLNIKIKGTLDKVKLA 785
                              G++SK   R +G ++S  E ESD +L NI+++G+ D++K A
Sbjct: 169 ATAKISVEASLAGAIIGKGGVNSKQICRQTGAKLSIREHESDPNLRNIELEGSFDQIKEA 228

Query: 786 MQLVQDHI------APPNSH 827
             +V+D +      APP S+
Sbjct: 229 SNMVKDLLLTLQMSAPPKSN 248


>ref|XP_003571204.1| PREDICTED: zinc finger CCCH domain-containing protein 14-like
           [Brachypodium distachyon]
          Length = 300

 Score = 64.7 bits (156), Expect = 8e-08
 Identities = 45/138 (32%), Positives = 66/138 (47%), Gaps = 12/138 (8%)
 Frame = +3

Query: 432 KTLLCYKFSHG-GCVESEKCPYAHGEGEL-RVPITYFKIPDEAGPMPTSSLADCLKPQ-- 599
           KT LC K++   GC   +KC +AHGE EL +       IP   GP PTS  A    P   
Sbjct: 100 KTRLCNKYNTAEGCKWGDKCHFAHGERELGKHTFIDSSIPPHMGPRPTSHFAPPAMPNPG 159

Query: 600 ----TRFGXXXXXXXXXXXXXXXX----NGMDSKLYARMSGTEISFEEDESDHSLLNIKI 755
                 FG                     G+++K  +R++G +++  + ESD SL NI++
Sbjct: 160 MVTPASFGASATAKISVDGSLAGAIIGRGGINTKQISRVTGAKLAIRDHESDDSLKNIEL 219

Query: 756 KGTLDKVKLAMQLVQDHI 809
           +GT D++K A  +V D I
Sbjct: 220 EGTFDQIKNASAMVTDLI 237


>ref|XP_002279071.1| PREDICTED: zinc finger CCCH domain-containing protein 14-like
           isoform 1 [Vitis vinifera]
          Length = 297

 Score = 63.9 bits (154), Expect = 1e-07
 Identities = 58/201 (28%), Positives = 86/201 (42%), Gaps = 39/201 (19%)
 Frame = +3

Query: 348 C*LDERCRFSHDAVYGYNASA----------------------VPNFAEE---KTLLCYK 452
           C   E C F H    GYNA A                      VPN +     K+ +C K
Sbjct: 49  CPFGESCHFLHYVPGGYNAVAQMTNQAPILPPASRNMAGPPPPVPNGSSMPAVKSKMCNK 108

Query: 453 FSHG-GCVESEKCPYAHGEGELRVPIT-YFKIPDEAGPMPTSSLADCLKPQ-----TRFG 611
           F+   GC   +KC +AHGE EL  P+  Y   P   G +P   LA  ++P        FG
Sbjct: 109 FNTAEGCKFGDKCHFAHGEWELGKPLAPYHDDPRAMGSIP-GRLAGRIEPSPTGPAASFG 167

Query: 612 XXXXXXXXXXXXXXXX----NGMDSKLYARMSGTEISFEEDESDHSLLNIKIKGTLDKVK 779
                                G++SK   R +G ++S  E +SD +L NI+++GT +++K
Sbjct: 168 ASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIREHDSDPNLRNIELEGTFEQIK 227

Query: 780 LAMQLVQD---HIAPPNSHAR 833
            A  +V++   +I+    HAR
Sbjct: 228 EASAMVRELIVNISAMPGHAR 248


>sp|Q69XQ3.1|C3H44_ORYSJ RecName: Full=Zinc finger CCCH domain-containing protein 44;
           Short=OsC3H44 gi|51090454|dbj|BAD35424.1| KH
           domain-containing protein / zinc finger protein-like
           [Oryza sativa Japonica Group]
          Length = 295

 Score = 62.8 bits (151), Expect = 3e-07
 Identities = 60/225 (26%), Positives = 89/225 (39%), Gaps = 50/225 (22%)
 Frame = +3

Query: 348 C*LDERCRFSHDAVYGYNASAV-------------------------PNFAEEKTLLCYK 452
           C     C F H+   GY A+A                          P  +  KT +C K
Sbjct: 47  CPFGSSCHFLHNFPGGYQAAAKMTSHGGTAVAAPPGRMPLGPGAPNGPPTSSVKTRMCNK 106

Query: 453 FSHG-GCVESEKCPYAHGEGELRVPITYFK--------IPDEAGPMPTSSLADCLKPQTR 605
           ++   GC    KC +AHGE EL  P+            +P EA PMP   +     P + 
Sbjct: 107 YNTAEGCKWGSKCHFAHGERELGKPMLLDNSMPHPMGSMPFEAPPMPGPDIV----PPST 162

Query: 606 FGXXXXXXXXXXXXXXXX----NGMDSKLYARMSGTEISFEEDESDHSLLNIKIKGTLDK 773
           FG                     G ++K  +RM+G +++  ++ES+ +L NI+++GT D+
Sbjct: 163 FGASATAKISVDASLAGGIIGKGGTNTKHISRMTGAKLAIRDNESNPNLKNIELEGTFDQ 222

Query: 774 VKLAMQLVQDHI------APP------NSHARCVPLTFKINLLPN 872
           +K A  +V + I      APP       SHA      FK  L  N
Sbjct: 223 IKHASAMVTELIVRISGNAPPAKNPGRGSHAGGPGSNFKTKLCEN 267


>gb|EEE66019.1| hypothetical protein OsJ_21979 [Oryza sativa Japonica Group]
          Length = 307

 Score = 62.8 bits (151), Expect = 3e-07
 Identities = 60/225 (26%), Positives = 89/225 (39%), Gaps = 50/225 (22%)
 Frame = +3

Query: 348 C*LDERCRFSHDAVYGYNASAV-------------------------PNFAEEKTLLCYK 452
           C     C F H+   GY A+A                          P  +  KT +C K
Sbjct: 59  CPFGSSCHFLHNFPGGYQAAAKMTSHGGTAVAAPPGRMPLGPGAPNGPPTSSVKTRMCNK 118

Query: 453 FSHG-GCVESEKCPYAHGEGELRVPITYFK--------IPDEAGPMPTSSLADCLKPQTR 605
           ++   GC    KC +AHGE EL  P+            +P EA PMP   +     P + 
Sbjct: 119 YNTAEGCKWGSKCHFAHGERELGKPMLLDNSMPHPMGSMPFEAPPMPGPDIV----PPST 174

Query: 606 FGXXXXXXXXXXXXXXXX----NGMDSKLYARMSGTEISFEEDESDHSLLNIKIKGTLDK 773
           FG                     G ++K  +RM+G +++  ++ES+ +L NI+++GT D+
Sbjct: 175 FGASATAKISVDASLAGGIIGKGGTNTKHISRMTGAKLAIRDNESNPNLKNIELEGTFDQ 234

Query: 774 VKLAMQLVQDHI------APP------NSHARCVPLTFKINLLPN 872
           +K A  +V + I      APP       SHA      FK  L  N
Sbjct: 235 IKHASAMVTELIVRISGNAPPAKNPGRGSHAGGPGSNFKTKLCEN 279


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