BLASTX nr result
ID: Cnidium21_contig00010949
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cnidium21_contig00010949
(375 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002882665.1| predicted protein [Arabidopsis lyrata subsp.... 87 9e-30
ref|NP_187650.4| lysine-specific histone demethylase 1 [Arabidop... 89 3e-29
sp|Q9CAE3.1|LDL3_ARATH RecName: Full=Lysine-specific histone dem... 89 3e-29
gb|AAX51267.1| flowering locus D [Arabidopsis thaliana] 89 3e-29
gb|AAX47181.1| FLOWERING LOCUS D [Pisum sativum] 90 2e-16
>ref|XP_002882665.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297328505|gb|EFH58924.1| predicted protein
[Arabidopsis lyrata subsp. lyrata]
Length = 789
Score = 87.4 bits (215), Expect(3) = 9e-30
Identities = 42/55 (76%), Positives = 48/55 (87%)
Frame = -2
Query: 326 QIYEGNMVLCTFPLRVLKRVSIKFIPELLQRNLEGIKRLGFGLLNKVAMLFPFVF 162
Q+YEG+MVLCT PL VLK SIKF+PEL QR L+ +KRLGFGLLNKVAMLFP+VF
Sbjct: 416 QVYEGDMVLCTVPLGVLKNGSIKFVPELPQRKLDCMKRLGFGLLNKVAMLFPYVF 470
Score = 48.9 bits (115), Expect(3) = 9e-30
Identities = 24/32 (75%), Positives = 25/32 (78%)
Frame = -3
Query: 97 FVTAISYATVADGPLLIALVAGEATHKFESMP 2
F SYA VA GPLLIALVAGEA HKFE+MP
Sbjct: 491 FFLFYSYAPVAGGPLLIALVAGEAAHKFETMP 522
Score = 39.3 bits (90), Expect(3) = 9e-30
Identities = 16/26 (61%), Positives = 19/26 (73%)
Frame = -1
Query: 177 FSICFWGTDLDTFVHLTDEQSSRGEF 100
F FW TDLDTF HLT++ + RGEF
Sbjct: 466 FPYVFWSTDLDTFGHLTEDPNYRGEF 491
>ref|NP_187650.4| lysine-specific histone demethylase 1 [Arabidopsis thaliana]
gi|332641378|gb|AEE74899.1| lysine-specific histone
demethylase 1 [Arabidopsis thaliana]
Length = 884
Score = 88.6 bits (218), Expect(3) = 3e-29
Identities = 43/55 (78%), Positives = 48/55 (87%)
Frame = -2
Query: 326 QIYEGNMVLCTFPLRVLKRVSIKFIPELLQRNLEGIKRLGFGLLNKVAMLFPFVF 162
Q+YEG+MVLCT PL VLK SIKF+PEL QR L+ IKRLGFGLLNKVAMLFP+VF
Sbjct: 416 QVYEGDMVLCTVPLGVLKNGSIKFVPELPQRKLDCIKRLGFGLLNKVAMLFPYVF 470
Score = 45.8 bits (107), Expect(3) = 3e-29
Identities = 23/32 (71%), Positives = 24/32 (75%)
Frame = -3
Query: 97 FVTAISYATVADGPLLIALVAGEATHKFESMP 2
F SYA VA G LLIALVAGEA HKFE+MP
Sbjct: 491 FFLFYSYAPVAGGALLIALVAGEAAHKFETMP 522
Score = 39.3 bits (90), Expect(3) = 3e-29
Identities = 16/26 (61%), Positives = 19/26 (73%)
Frame = -1
Query: 177 FSICFWGTDLDTFVHLTDEQSSRGEF 100
F FW TDLDTF HLT++ + RGEF
Sbjct: 466 FPYVFWSTDLDTFGHLTEDPNYRGEF 491
>sp|Q9CAE3.1|LDL3_ARATH RecName: Full=Lysine-specific histone demethylase 1 homolog 3;
AltName: Full=Flavin-containing amine oxidase
domain-containing protein 3; AltName: Full=Protein
FLOWERING LOCUS D; AltName: Full=Protein LSD1-LIKE 3;
AltName: Full=Protein SUPPRESSOR OF OVEREXPRESSED FCA 1
gi|12322798|gb|AAG51395.1|AC011560_27 hypothetical
protein; 118064-115538 [Arabidopsis thaliana]
gi|61661320|gb|AAX51266.1| flowering locus D
[Arabidopsis thaliana]
Length = 789
Score = 88.6 bits (218), Expect(3) = 3e-29
Identities = 43/55 (78%), Positives = 48/55 (87%)
Frame = -2
Query: 326 QIYEGNMVLCTFPLRVLKRVSIKFIPELLQRNLEGIKRLGFGLLNKVAMLFPFVF 162
Q+YEG+MVLCT PL VLK SIKF+PEL QR L+ IKRLGFGLLNKVAMLFP+VF
Sbjct: 416 QVYEGDMVLCTVPLGVLKNGSIKFVPELPQRKLDCIKRLGFGLLNKVAMLFPYVF 470
Score = 45.8 bits (107), Expect(3) = 3e-29
Identities = 23/32 (71%), Positives = 24/32 (75%)
Frame = -3
Query: 97 FVTAISYATVADGPLLIALVAGEATHKFESMP 2
F SYA VA G LLIALVAGEA HKFE+MP
Sbjct: 491 FFLFYSYAPVAGGALLIALVAGEAAHKFETMP 522
Score = 39.3 bits (90), Expect(3) = 3e-29
Identities = 16/26 (61%), Positives = 19/26 (73%)
Frame = -1
Query: 177 FSICFWGTDLDTFVHLTDEQSSRGEF 100
F FW TDLDTF HLT++ + RGEF
Sbjct: 466 FPYVFWSTDLDTFGHLTEDPNYRGEF 491
>gb|AAX51267.1| flowering locus D [Arabidopsis thaliana]
Length = 789
Score = 88.6 bits (218), Expect(3) = 3e-29
Identities = 43/55 (78%), Positives = 48/55 (87%)
Frame = -2
Query: 326 QIYEGNMVLCTFPLRVLKRVSIKFIPELLQRNLEGIKRLGFGLLNKVAMLFPFVF 162
Q+YEG+MVLCT PL VLK SIKF+PEL QR L+ IKRLGFGLLNKVAMLFP+VF
Sbjct: 416 QVYEGDMVLCTVPLGVLKNGSIKFVPELPQRKLDCIKRLGFGLLNKVAMLFPYVF 470
Score = 45.8 bits (107), Expect(3) = 3e-29
Identities = 23/32 (71%), Positives = 24/32 (75%)
Frame = -3
Query: 97 FVTAISYATVADGPLLIALVAGEATHKFESMP 2
F SYA VA G LLIALVAGEA HKFE+MP
Sbjct: 491 FFLFYSYAPVAGGALLIALVAGEAAHKFETMP 522
Score = 39.3 bits (90), Expect(3) = 3e-29
Identities = 16/26 (61%), Positives = 19/26 (73%)
Frame = -1
Query: 177 FSICFWGTDLDTFVHLTDEQSSRGEF 100
F FW TDLDTF HLT++ + RGEF
Sbjct: 466 FPYVFWSTDLDTFGHLTEDPNYRGEF 491
>gb|AAX47181.1| FLOWERING LOCUS D [Pisum sativum]
Length = 247
Score = 89.7 bits (221), Expect = 2e-16
Identities = 50/82 (60%), Positives = 57/82 (69%), Gaps = 1/82 (1%)
Frame = -2
Query: 326 QIYEGNMVLCTFPLRVLKRVSIKFIPELLQRNLEGIKRLGFGLLNKVAMLFPFVFGVLIS 147
Q++EG+M LCT PL VLK+ SIKFIPEL QR L+GIKRLGFGLLNKVAMLFP VF +
Sbjct: 77 QVFEGDMALCTVPLGVLKKGSIKFIPELPQRKLDGIKRLGFGLLNKVAMLFPHVFWEMDL 136
Query: 146 THLCILLMSKAAGGSFFC-YSY 84
L + G FF YSY
Sbjct: 137 DTFGHLSDDPSRRGEFFLFYSY 158
Score = 55.5 bits (132), Expect = 5e-06
Identities = 49/132 (37%), Positives = 57/132 (43%), Gaps = 8/132 (6%)
Frame = -3
Query: 373 HTIRYGGPGVQVISGGRFMRVIWFFALFLYGF*KESLSNLFPSYYKEILKE*ND*DLVC* 194
HTIRYG GVQVI+G + G K+ P + L
Sbjct: 61 HTIRYGSDGVQVIAGSQVFEGDMALCTVPLGVLKKGSIKFIPELPQRKLDGIKRLGFGLL 120
Query: 193 TKLPCFF-HLF-------LGY*SRHICASY**AKQPGGVSFVTAISYATVADGPLLIALV 38
K+ F H+F G+ S + G F SYATVA GPLLIALV
Sbjct: 121 NKVAMLFPHVFWEMDLDTFGHLSDD-------PSRRG--EFFLFYSYATVAGGPLLIALV 171
Query: 37 AGEATHKFESMP 2
AGEA HKFESMP
Sbjct: 172 AGEAAHKFESMP 183